RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TLL1O43897 1013 aa9.33□□□□□ -0.92
XRN1-211ENST00000477237 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
XRN1-211ENST00000477237 E2F4Q16254 413 aa9.32□□□□□ -0.92
XRN1-211ENST00000477237 LIAT1Q6ZQX7 453 aa9.32□□□□□ -0.92
XRN1-211ENST00000477237 EYA1Q99502 592 aa9.32□□□□□ -0.92
XRN1-211ENST00000477237 ARIH1Q9Y4X5 557 aaPredicted RBP9.32□□□□□ -0.92
XRN1-211ENST00000477237 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
XRN1-211ENST00000477237 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
XRN1-211ENST00000477237 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
XRN1-211ENST00000477237 ZNF697Q5TEC3 545 aa9.3□□□□□ -0.92
XRN1-211ENST00000477237 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
XRN1-211ENST00000477237 TNFRSF10AO00220 468 aa9.29□□□□□ -0.92
XRN1-211ENST00000477237 GDF9O60383 454 aa9.29□□□□□ -0.92
XRN1-211ENST00000477237 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
XRN1-211ENST00000477237 ST8SIA5O15466 376 aa9.28□□□□□ -0.92
XRN1-211ENST00000477237 S1PR4O95977 384 aa9.28□□□□□ -0.92
XRN1-211ENST00000477237 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
XRN1-211ENST00000477237 AAASQ9NRG9 546 aa9.26□□□□□ -0.93
XRN1-211ENST00000477237 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
XRN1-211ENST00000477237 ACTN4O43707 911 aaKnown RBP9.21□□□□□ -0.94
XRN1-211ENST00000477237 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.94
XRN1-211ENST00000477237 ADH1BP00325 375 aa9.2□□□□□ -0.94
XRN1-211ENST00000477237 DNAJB2P25686 324 aa9.2□□□□□ -0.94
XRN1-211ENST00000477237 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
XRN1-211ENST00000477237 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
XRN1-211ENST00000477237 KMT5BQ4FZB7 885 aa9.18□□□□□ -0.94
XRN1-211ENST00000477237 TMEM134Q9H6X4 195 aa9.18□□□□□ -0.94
XRN1-211ENST00000477237 WDR70Q9NW82 654 aa9.18□□□□□ -0.94
XRN1-211ENST00000477237 CFHP08603 1231 aa9.17□□□□□ -0.94
XRN1-211ENST00000477237 SLC6A16Q9GZN6 736 aa9.17□□□□□ -0.94
XRN1-211ENST00000477237 FOXC1Q12948 553 aa9.16□□□□□ -0.94
XRN1-211ENST00000477237 WFS1O76024 890 aa9.15□□□□□ -0.94
XRN1-211ENST00000477237 CRIPAKQ8N1N5 446 aa9.15□□□□□ -0.94
XRN1-211ENST00000477237 NR1I2O75469 434 aa9.14□□□□□ -0.95
XRN1-211ENST00000477237 SLC10A3P09131 477 aa9.14□□□□□ -0.95
XRN1-211ENST00000477237 SPRYD3Q8NCJ5 442 aa9.14□□□□□ -0.95
XRN1-211ENST00000477237 RBM46Q8TBY0 533 aaKnown RBP9.14□□□□□ -0.95
XRN1-211ENST00000477237 ADGRG1Q9Y653 693 aa9.14□□□□□ -0.95
XRN1-211ENST00000477237 RCCD1A6NED2 376 aa9.13□□□□□ -0.95
XRN1-211ENST00000477237 GMPR2Q9P2T1 348 aaKnown RBP9.13□□□□□ -0.95
XRN1-211ENST00000477237 PTGDRQ13258 359 aa9.12□□□□□ -0.95
XRN1-211ENST00000477237 FAM161AQ3B820 660 aa9.12□□□□□ -0.95
XRN1-211ENST00000477237 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
XRN1-211ENST00000477237 AVPP01185 164 aa9.11□□□□□ -0.95
XRN1-211ENST00000477237 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
XRN1-211ENST00000477237 SCUBE3Q8IX30 993 aa9.11□□□□□ -0.95
XRN1-211ENST00000477237 TOR4AQ9NXH8 423 aa9.11□□□□□ -0.95
XRN1-211ENST00000477237 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
XRN1-211ENST00000477237 MLLT3P42568 568 aaPredicted RBP9.1□□□□□ -0.95
XRN1-211ENST00000477237 STK17AQ9UEE5 414 aa9.1□□□□□ -0.95
XRN1-211ENST00000477237 AXIN1O15169 862 aa9.08□□□□□ -0.96
XRN1-211ENST00000477237 PUS10Q3MIT2 529 aaKnown RBP9.08□□□□□ -0.96
XRN1-211ENST00000477237 SPSB2Q99619 263 aa9.08□□□□□ -0.96
XRN1-211ENST00000477237 WIPF1O43516 503 aa9.07□□□□□ -0.96
XRN1-211ENST00000477237 RPIAP49247 311 aa9.07□□□□□ -0.96
XRN1-211ENST00000477237 LCE2CQ5TA81 110 aa9.05□□□□□ -0.96
XRN1-211ENST00000477237 CYP4X1Q8N118 509 aa9.05□□□□□ -0.96
XRN1-211ENST00000477237 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
XRN1-211ENST00000477237 CTC1Q2NKJ3 1217 aa9.04□□□□□ -0.96
XRN1-211ENST00000477237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.03□□□□□ -0.96
XRN1-211ENST00000477237 INSM1Q01101 510 aaPredicted RBP9.03□□□□□ -0.96
XRN1-211ENST00000477237 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
XRN1-211ENST00000477237 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
XRN1-211ENST00000477237 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.01□□□□□ -0.97
XRN1-211ENST00000477237 NUTM2FA1L443 756 aa8.99□□□□□ -0.97
XRN1-211ENST00000477237 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
XRN1-211ENST00000477237 FAM160A2Q8N612 972 aaPredicted RBP8.99□□□□□ -0.97
XRN1-211ENST00000477237 PXYLP1Q8TE99 480 aa8.99□□□□□ -0.97
XRN1-211ENST00000477237 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
XRN1-211ENST00000477237 CFAP44Q96MT7 982 aa8.99□□□□□ -0.97
XRN1-211ENST00000477237 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
XRN1-211ENST00000477237 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
XRN1-211ENST00000477237 TERTO14746 1132 aaKnown RBP8.97□□□□□ -0.97
XRN1-211ENST00000477237 MORN1Q5T089 497 aa8.97□□□□□ -0.97
XRN1-211ENST00000477237 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
XRN1-211ENST00000477237 ATP13A2Q9NQ11 1180 aa8.97□□□□□ -0.97
XRN1-211ENST00000477237 SMPD1P17405 629 aa8.96□□□□□ -0.98
XRN1-211ENST00000477237 PRDM9Q9NQV7 894 aa8.96□□□□□ -0.98
XRN1-211ENST00000477237 RSPH4AQ5TD94 716 aa8.95□□□□□ -0.98
XRN1-211ENST00000477237 FCHSD2O94868 740 aa8.94□□□□□ -0.98
XRN1-211ENST00000477237 OATP04181 439 aa8.94□□□□□ -0.98
XRN1-211ENST00000477237 FUT2Q10981 343 aa8.93□□□□□ -0.98
XRN1-211ENST00000477237 TRIM47Q96LD4 638 aa8.93□□□□□ -0.98
XRN1-211ENST00000477237 FMNL1O95466 1100 aaPredicted RBP8.92□□□□□ -0.98
XRN1-211ENST00000477237 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
XRN1-211ENST00000477237 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
XRN1-211ENST00000477237 SLC27A5Q9Y2P5 690 aa8.92□□□□□ -0.98
XRN1-211ENST00000477237 WNT7AO00755 349 aa8.91□□□□□ -0.98
XRN1-211ENST00000477237 KCNV2Q8TDN2 545 aa8.91□□□□□ -0.98
XRN1-211ENST00000477237 J3QL48 77 aa8.9□□□□□ -0.98
XRN1-211ENST00000477237 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
XRN1-211ENST00000477237 ATP6V1AP38606 617 aa8.9□□□□□ -0.98
XRN1-211ENST00000477237 RDH13Q8NBN7 331 aa8.9□□□□□ -0.98
XRN1-211ENST00000477237 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
XRN1-211ENST00000477237 SENP2Q9HC62 589 aa8.89□□□□□ -0.99
XRN1-211ENST00000477237 MRGPRX2Q96LB1 330 aa8.88□□□□□ -0.99
XRN1-211ENST00000477237 SALL2Q9Y467 1007 aaPredicted RBP8.88□□□□□ -0.99
XRN1-211ENST00000477237 LOC100996750A0A140TA64 210 aa8.87□□□□□ -0.99
XRN1-211ENST00000477237 HPS1Q92902 700 aa8.87□□□□□ -0.99
XRN1-211ENST00000477237 KRTAP4-6Q9BYQ5 205 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms