RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 NASPP49321 788 aaPredicted RBP27.54■■■□□ 2
TMEM42-202ENST00000477126 ANP32BQ92688 251 aaKnown RBP27.54■■■□□ 2
TMEM42-202ENST00000477126 EPRSP07814 1512 aaKnown RBP27.53■■■□□ 2
TMEM42-202ENST00000477126 DDX11L8A8MPP1 907 aa27.53■■■□□ 2
TMEM42-202ENST00000477126 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
TMEM42-202ENST00000477126 PRDM4Q9UKN5 801 aa27.53■■■□□ 2
TMEM42-202ENST00000477126 GAPVD1Q14C86 1478 aa27.53■■■□□ 2
TMEM42-202ENST00000477126 JARID2Q92833 1246 aaPredicted RBP27.52■■■□□ 2
TMEM42-202ENST00000477126 AMER1Q5JTC6 1135 aaPredicted RBP27.51■■□□□ 1.99
TMEM42-202ENST00000477126 EIF3AQ14152 1382 aaKnown RBP27.51■■□□□ 1.99
TMEM42-202ENST00000477126 TESK2Q96S53 571 aa27.5■■□□□ 1.99
TMEM42-202ENST00000477126 CAMSAP2Q08AD1 1489 aa27.49■■□□□ 1.99
TMEM42-202ENST00000477126 TPRNQ4KMQ1 711 aa27.49■■□□□ 1.99
TMEM42-202ENST00000477126 NLRP1Q9C000 1473 aa27.48■■□□□ 1.99
TMEM42-202ENST00000477126 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
TMEM42-202ENST00000477126 ZNF521Q96K83 1311 aa27.48■■□□□ 1.99
TMEM42-202ENST00000477126 KIF14Q15058 1648 aa27.48■■□□□ 1.99
TMEM42-202ENST00000477126 UQCRHLA0A096LP55 91 aa27.47■■□□□ 1.99
TMEM42-202ENST00000477126 UQCRHP07919 91 aa27.47■■□□□ 1.99
TMEM42-202ENST00000477126 DDX49Q9Y6V7 483 aaKnown RBP27.47■■□□□ 1.99
TMEM42-202ENST00000477126 KIAA0586Q9BVV6 1533 aa27.47■■□□□ 1.99
TMEM42-202ENST00000477126 E9PSI1 815 aa27.47■■□□□ 1.99
TMEM42-202ENST00000477126 TSC1Q92574 1164 aa27.46■■□□□ 1.99
TMEM42-202ENST00000477126 RBM42Q9BTD8 480 aaKnown RBP27.46■■□□□ 1.99
TMEM42-202ENST00000477126 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
TMEM42-202ENST00000477126 KIF21AQ7Z4S6 1674 aa27.45■■□□□ 1.99
TMEM42-202ENST00000477126 ARHGEF11O15085 1522 aa27.45■■□□□ 1.98
TMEM42-202ENST00000477126 ZSCAN30Q86W11 494 aa27.44■■□□□ 1.98
TMEM42-202ENST00000477126 PMFBP1Q8TBY8 1022 aa27.44■■□□□ 1.98
TMEM42-202ENST00000477126 SSFA2P28290 1259 aa27.44■■□□□ 1.98
TMEM42-202ENST00000477126 CALD1Q05682 793 aaKnown RBP27.44■■□□□ 1.98
TMEM42-202ENST00000477126 ANKRD50Q9ULJ7 1429 aa27.43■■□□□ 1.98
TMEM42-202ENST00000477126 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
TMEM42-202ENST00000477126 RWDD1Q9H446 243 aaPredicted RBP27.42■■□□□ 1.98
TMEM42-202ENST00000477126 FAM177BA6PVY3 158 aa27.42■■□□□ 1.98
TMEM42-202ENST00000477126 FOXD4L5Q5VV16 416 aaPredicted RBP27.42■■□□□ 1.98
TMEM42-202ENST00000477126 FOXD4L4Q8WXT5 416 aaPredicted RBP27.42■■□□□ 1.98
TMEM42-202ENST00000477126 NKTRP30414 1462 aaKnown RBP27.42■■□□□ 1.98
TMEM42-202ENST00000477126 FTSJ3Q8IY81 847 aaKnown RBP27.41■■□□□ 1.98
TMEM42-202ENST00000477126 GBP4Q96PP9 640 aa27.41■■□□□ 1.98
TMEM42-202ENST00000477126 PDE3AQ14432 1141 aa27.41■■□□□ 1.98
TMEM42-202ENST00000477126 SAMD9Q5K651 1589 aa27.4■■□□□ 1.98
TMEM42-202ENST00000477126 CD2BP2O95400 341 aaKnown RBP27.4■■□□□ 1.98
TMEM42-202ENST00000477126 AAMPQ13685 434 aa27.4■■□□□ 1.98
TMEM42-202ENST00000477126 CHAMP1Q96JM3 812 aa27.39■■□□□ 1.98
TMEM42-202ENST00000477126 TSPY4P0CV99 314 aa27.39■■□□□ 1.98
TMEM42-202ENST00000477126 TSPY10P0CW01 314 aa27.39■■□□□ 1.98
TMEM42-202ENST00000477126 CAVIN1Q6NZI2 390 aaKnown RBP27.39■■□□□ 1.97
TMEM42-202ENST00000477126 PRG4Q92954 1404 aaPredicted RBP27.38■■□□□ 1.97
TMEM42-202ENST00000477126 OFD1O75665 1012 aa27.38■■□□□ 1.97
TMEM42-202ENST00000477126 LNPKQ9C0E8 428 aa27.38■■□□□ 1.97
TMEM42-202ENST00000477126 ANKRD30AQ9BXX3 1397 aa27.37■■□□□ 1.97
TMEM42-202ENST00000477126 ZNF692Q9BU19 519 aaPredicted RBP27.36■■□□□ 1.97
TMEM42-202ENST00000477126 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.36■■□□□ 1.97
TMEM42-202ENST00000477126 WWC1Q8IX03 1113 aa27.36■■□□□ 1.97
TMEM42-202ENST00000477126 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
TMEM42-202ENST00000477126 RNF214Q8ND24 703 aa27.35■■□□□ 1.97
TMEM42-202ENST00000477126 RARSP54136 660 aaKnown RBP27.35■■□□□ 1.97
TMEM42-202ENST00000477126 ERBINQ96RT1 1412 aa27.35■■□□□ 1.97
TMEM42-202ENST00000477126 CCDC173Q0VFZ6 552 aa27.35■■□□□ 1.97
TMEM42-202ENST00000477126 MCTP1Q6DN14 999 aa27.35■■□□□ 1.97
TMEM42-202ENST00000477126 UHRF1BP1Q6BDS2 1440 aa27.34■■□□□ 1.97
TMEM42-202ENST00000477126 ITPRIPQ8IWB1 547 aa27.34■■□□□ 1.97
TMEM42-202ENST00000477126 DNTTIP2Q5QJE6 756 aaKnown RBP27.34■■□□□ 1.97
TMEM42-202ENST00000477126 ZNF608Q9ULD9 1512 aaPredicted RBP27.33■■□□□ 1.97
TMEM42-202ENST00000477126 IGSF3O75054 1194 aa27.33■■□□□ 1.97
TMEM42-202ENST00000477126 TRMT2AQ8IZ69 625 aaKnown RBP27.33■■□□□ 1.97
TMEM42-202ENST00000477126 RBM27Q9P2N5 1060 aaKnown RBP27.32■■□□□ 1.96
TMEM42-202ENST00000477126 PLEKHH2Q8IVE3 1493 aa27.32■■□□□ 1.96
TMEM42-202ENST00000477126 TSR2Q969E8 191 aaKnown RBP27.29■■□□□ 1.96
TMEM42-202ENST00000477126 CBX1P83916 185 aa27.28■■□□□ 1.96
TMEM42-202ENST00000477126 TARBP1Q13395 1621 aaKnown RBP27.28■■□□□ 1.96
TMEM42-202ENST00000477126 FOXD4L6Q3SYB3 417 aaPredicted RBP27.27■■□□□ 1.96
TMEM42-202ENST00000477126 FOXD4L3Q6VB84 417 aaPredicted RBP27.27■■□□□ 1.96
TMEM42-202ENST00000477126 GOLGA6L22H0YM25 854 aa27.26■■□□□ 1.95
TMEM42-202ENST00000477126 MAGI2Q86UL8 1455 aa27.25■■□□□ 1.95
TMEM42-202ENST00000477126 GAS2L2Q8NHY3 880 aa27.25■■□□□ 1.95
TMEM42-202ENST00000477126 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
TMEM42-202ENST00000477126 RBSNQ9H1K0 784 aa27.25■■□□□ 1.95
TMEM42-202ENST00000477126 CCDC144AA2RUR9 1427 aa27.25■■□□□ 1.95
TMEM42-202ENST00000477126 PTMAP06454 111 aaKnown RBP27.24■■□□□ 1.95
TMEM42-202ENST00000477126 MAPK8IP2Q13387 824 aaPredicted RBP27.24■■□□□ 1.95
TMEM42-202ENST00000477126 TCP11L2Q8N4U5 519 aa27.23■■□□□ 1.95
TMEM42-202ENST00000477126 DNMT1P26358 1616 aaKnown RBP27.22■■□□□ 1.95
TMEM42-202ENST00000477126 RAB3GAP1Q15042 981 aa27.22■■□□□ 1.95
TMEM42-202ENST00000477126 BCL11BQ9C0K0 894 aaPredicted RBP27.22■■□□□ 1.95
TMEM42-202ENST00000477126 PKP1Q13835 747 aa27.21■■□□□ 1.95
TMEM42-202ENST00000477126 PRAG1Q86YV5 1406 aa27.21■■□□□ 1.95
TMEM42-202ENST00000477126 PRIM1P49642 420 aaKnown RBP27.21■■□□□ 1.95
TMEM42-202ENST00000477126 SMC4Q9NTJ3 1288 aa27.21■■□□□ 1.95
TMEM42-202ENST00000477126 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.94
TMEM42-202ENST00000477126 SKOR2Q2VWA4 1001 aaPredicted RBP27.2■■□□□ 1.94
TMEM42-202ENST00000477126 ZNF830Q96NB3 372 aaPredicted RBP27.19■■□□□ 1.94
TMEM42-202ENST00000477126 PRPF40AO75400 957 aaKnown RBP27.18■■□□□ 1.94
TMEM42-202ENST00000477126 DZIP1LQ8IYY4 767 aaKnown RBP27.18■■□□□ 1.94
TMEM42-202ENST00000477126 C1orf115Q9H7X2 142 aa27.18■■□□□ 1.94
TMEM42-202ENST00000477126 FBLN2P98095 1184 aa27.18■■□□□ 1.94
TMEM42-202ENST00000477126 PPP1R9BQ96SB3 815 aa27.18■■□□□ 1.94
TMEM42-202ENST00000477126 BAG4O95429 457 aaKnown RBP27.17■■□□□ 1.94
TMEM42-202ENST00000477126 FGD1P98174 961 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms