RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
PRPF3-205ENST00000476970 ADGRB3O60242 1522 aa11.84□□□□□ -0.51
PRPF3-205ENST00000476970 NCOA3Q9Y6Q9 1424 aa11.84□□□□□ -0.51
PRPF3-205ENST00000476970 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
PRPF3-205ENST00000476970 SLC26A8Q96RN1 970 aa11.83□□□□□ -0.52
PRPF3-205ENST00000476970 KANK1Q14678 1352 aa11.81□□□□□ -0.52
PRPF3-205ENST00000476970 RGS12O14924 1447 aa11.81□□□□□ -0.52
PRPF3-205ENST00000476970 ERBINQ96RT1 1412 aa11.81□□□□□ -0.52
PRPF3-205ENST00000476970 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
PRPF3-205ENST00000476970 DIP2AQ14689 1571 aa11.8□□□□□ -0.52
PRPF3-205ENST00000476970 BCANQ96GW7 911 aa11.8□□□□□ -0.52
PRPF3-205ENST00000476970 AFF2P51816 1311 aa11.8□□□□□ -0.52
PRPF3-205ENST00000476970 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
PRPF3-205ENST00000476970 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
PRPF3-205ENST00000476970 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
PRPF3-205ENST00000476970 CROCC2H7BZ55 1655 aa11.78□□□□□ -0.52
PRPF3-205ENST00000476970 LMTK2Q8IWU2 1503 aa11.78□□□□□ -0.52
PRPF3-205ENST00000476970 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
PRPF3-205ENST00000476970 NUTM2BA6NNL0 878 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-205ENST00000476970 NUTM2EB1AL46 878 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-205ENST00000476970 RBM6P78332 1123 aaKnown RBP11.77□□□□□ -0.53
PRPF3-205ENST00000476970 NUTM2DQ5VT03 806 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-205ENST00000476970 NUTM2AQ8IVF1 878 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-205ENST00000476970 KIF15Q9NS87 1388 aa11.77□□□□□ -0.53
PRPF3-205ENST00000476970 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.53
PRPF3-205ENST00000476970 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
PRPF3-205ENST00000476970 ATF3P18847 181 aa11.76□□□□□ -0.53
PRPF3-205ENST00000476970 IDI1Q13907 227 aa11.76□□□□□ -0.53
PRPF3-205ENST00000476970 MYOM3Q5VTT5 1437 aa11.76□□□□□ -0.53
PRPF3-205ENST00000476970 NHSL1Q5SYE7 1610 aa11.75□□□□□ -0.53
PRPF3-205ENST00000476970 NGLY1Q96IV0 654 aa11.75□□□□□ -0.53
PRPF3-205ENST00000476970 GCC2Q8IWJ2 1684 aa11.75□□□□□ -0.53
PRPF3-205ENST00000476970 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-205ENST00000476970 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
PRPF3-205ENST00000476970 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
PRPF3-205ENST00000476970 SLC52A1Q9NWF4 448 aa11.74□□□□□ -0.53
PRPF3-205ENST00000476970 NOS1P29475 1434 aa11.74□□□□□ -0.53
PRPF3-205ENST00000476970 DCCP43146 1447 aa11.74□□□□□ -0.53
PRPF3-205ENST00000476970 SETD5Q9C0A6 1442 aa11.74□□□□□ -0.53
PRPF3-205ENST00000476970 ASXL1Q8IXJ9 1541 aa11.74□□□□□ -0.53
PRPF3-205ENST00000476970 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
PRPF3-205ENST00000476970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.539e-7■□□□□ 9
PRPF3-205ENST00000476970 QTRT2Q9H974 415 aaKnown RBP11.73□□□□□ -0.53
PRPF3-205ENST00000476970 SETBP1Q9Y6X0 1596 aa11.72□□□□□ -0.53
PRPF3-205ENST00000476970 PIK3R4Q99570 1358 aa11.72□□□□□ -0.53
PRPF3-205ENST00000476970 C8orf37Q96NL8 207 aa11.72□□□□□ -0.53
PRPF3-205ENST00000476970 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
PRPF3-205ENST00000476970 BRINP3Q76B58 766 aa11.71□□□□□ -0.53
PRPF3-205ENST00000476970 TBX22Q9Y458 520 aa11.71□□□□□ -0.53
PRPF3-205ENST00000476970 EP400Q96L91 3159 aa11.71□□□□□ -0.54
PRPF3-205ENST00000476970 TRPM2O94759 1503 aa11.7□□□□□ -0.54
PRPF3-205ENST00000476970 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
PRPF3-205ENST00000476970 LRRC59Q96AG4 307 aaKnown RBP11.7□□□□□ -0.54
PRPF3-205ENST00000476970 TMEM131LA2VDJ0 1609 aa11.69□□□□□ -0.54
PRPF3-205ENST00000476970 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
PRPF3-205ENST00000476970 LRP5O75197 1615 aa11.68□□□□□ -0.54
PRPF3-205ENST00000476970 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRPF3-205ENST00000476970 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
PRPF3-205ENST00000476970 CACNB1Q02641 598 aaPredicted RBP11.67□□□□□ -0.54
PRPF3-205ENST00000476970 RRP7BPQ9NSQ0 103 aa11.67□□□□□ -0.54
PRPF3-205ENST00000476970 MST1RQ04912 1400 aa11.66□□□□□ -0.54
PRPF3-205ENST00000476970 ADAMTS13Q76LX8 1427 aa11.66□□□□□ -0.54
PRPF3-205ENST00000476970 TRPC5Q9UL62 973 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-205ENST00000476970 XRN1Q8IZH2 1706 aaKnown RBP11.65□□□□□ -0.54
PRPF3-205ENST00000476970 PTPN23Q9H3S7 1636 aa11.64□□□□□ -0.55
PRPF3-205ENST00000476970 ABCC5O15440 1437 aa11.64□□□□□ -0.55
PRPF3-205ENST00000476970 ANKRD30AQ9BXX3 1397 aa11.64□□□□□ -0.55
PRPF3-205ENST00000476970 DAPK1P53355 1430 aa11.63□□□□□ -0.55
PRPF3-205ENST00000476970 PTCH1Q13635 1447 aa11.63□□□□□ -0.55
PRPF3-205ENST00000476970 USP21Q9UK80 565 aa11.63□□□□□ -0.55
PRPF3-205ENST00000476970 UNC13BO14795 1591 aa11.62□□□□□ -0.55
PRPF3-205ENST00000476970 LAMC1P11047 1609 aa11.62□□□□□ -0.55
PRPF3-205ENST00000476970 ADAMTS2O95450 1211 aa11.62□□□□□ -0.55
PRPF3-205ENST00000476970 ATRNO75882 1429 aa11.61□□□□□ -0.55
PRPF3-205ENST00000476970 AMOTL2Q9Y2J4 779 aa11.61□□□□□ -0.55
PRPF3-205ENST00000476970 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
PRPF3-205ENST00000476970 NALCNQ8IZF0 1738 aa11.6□□□□□ -0.55
PRPF3-205ENST00000476970 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
PRPF3-205ENST00000476970 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
PRPF3-205ENST00000476970 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
PRPF3-205ENST00000476970 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
PRPF3-205ENST00000476970 VPS8Q8N3P4 1428 aa11.59□□□□□ -0.55
PRPF3-205ENST00000476970 PTPRUQ92729 1446 aa11.59□□□□□ -0.55
PRPF3-205ENST00000476970 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.58□□□□□ -0.56
PRPF3-205ENST00000476970 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
PRPF3-205ENST00000476970 FNBP4Q8N3X1 1017 aaPredicted RBP11.58□□□□□ -0.56
PRPF3-205ENST00000476970 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
PRPF3-205ENST00000476970 NRXN3Q9Y4C0 1643 aa11.57□□□□□ -0.56
PRPF3-205ENST00000476970 SF3B2Q13435 895 aaKnown RBP11.56□□□□□ -0.56
PRPF3-205ENST00000476970 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
PRPF3-205ENST00000476970 E9PCH4 1651 aa11.55□□□□□ -0.56
PRPF3-205ENST00000476970 DDX17Q92841 729 aaKnown RBP11.55□□□□□ -0.56
PRPF3-205ENST00000476970 C1orf167Q5SNV9 1468 aa11.55□□□□□ -0.56
PRPF3-205ENST00000476970 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
PRPF3-205ENST00000476970 ANKRD50Q9ULJ7 1429 aa11.53□□□□□ -0.56
PRPF3-205ENST00000476970 MYOM2P54296 1465 aa11.53□□□□□ -0.56
PRPF3-205ENST00000476970 CHIC2Q9UKJ5 165 aa11.53□□□□□ -0.56
PRPF3-205ENST00000476970 SOS2Q07890 1332 aaPredicted RBP11.53□□□□□ -0.56
PRPF3-205ENST00000476970 BRWD3Q6RI45 1802 aa11.53□□□□□ -0.56
PRPF3-205ENST00000476970 BCL9LQ86UU0 1499 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms