RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
PSMD4-211ENST00000476855 CLTCL1P53675 1640 aa23.26■■□□□ 1.31
PSMD4-211ENST00000476855 PIK3C2BO00750 1634 aa23.25■■□□□ 1.31
PSMD4-211ENST00000476855 LRRC7Q96NW7 1537 aa23.24■■□□□ 1.31
PSMD4-211ENST00000476855 NOS1P29475 1434 aa23.24■■□□□ 1.31
PSMD4-211ENST00000476855 ERVK-7P63135 1459 aa23.23■■□□□ 1.31
PSMD4-211ENST00000476855 KIF1BO60333 1816 aa23.22■■□□□ 1.31
PSMD4-211ENST00000476855 STRCP1A6NGW2 1772 aa23.2■■□□□ 1.3
PSMD4-211ENST00000476855 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
PSMD4-211ENST00000476855 SIN3AQ96ST3 1273 aa23.16■■□□□ 1.3
PSMD4-211ENST00000476855 CCDC144AA2RUR9 1427 aa23.14■■□□□ 1.29
PSMD4-211ENST00000476855 RGS17Q9UGC6 210 aaPredicted RBP23.12■■□□□ 1.29
PSMD4-211ENST00000476855 SCAF11Q99590 1463 aaKnown RBP23.11■■□□□ 1.29
PSMD4-211ENST00000476855 IFT172Q9UG01 1749 aa23.1■■□□□ 1.29
PSMD4-211ENST00000476855 KDM5AP29375 1690 aaKnown RBP23.09■■□□□ 1.29
PSMD4-211ENST00000476855 ADGRB3O60242 1522 aa23.08■■□□□ 1.29
PSMD4-211ENST00000476855 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
PSMD4-211ENST00000476855 UBR1Q8IWV7 1749 aa23.08■■□□□ 1.29
PSMD4-211ENST00000476855 LTKP29376 864 aa23.08■■□□□ 1.29
PSMD4-211ENST00000476855 TXNDC2Q86VQ3 553 aa23.07■■□□□ 1.28
PSMD4-211ENST00000476855 NEUROD1Q13562 356 aa23.06■■□□□ 1.28
PSMD4-211ENST00000476855 SPATA31E1Q6ZUB1 1445 aa23.06■■□□□ 1.28
PSMD4-211ENST00000476855 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
PSMD4-211ENST00000476855 SLIT1O75093 1534 aa23.04■■□□□ 1.28
PSMD4-211ENST00000476855 EID1Q9Y6B2 187 aa23.04■■□□□ 1.28
PSMD4-211ENST00000476855 PPLO60437 1756 aa23.04■■□□□ 1.28
PSMD4-211ENST00000476855 FAM135BQ49AJ0 1406 aa23.01■■□□□ 1.27
PSMD4-211ENST00000476855 SLC52A1Q9NWF4 448 aa23.01■■□□□ 1.27
PSMD4-211ENST00000476855 XIRP1Q702N8 1843 aaKnown RBP22.99■■□□□ 1.27
PSMD4-211ENST00000476855 IDI1Q13907 227 aa22.99■■□□□ 1.27
PSMD4-211ENST00000476855 TONSLQ96HA7 1378 aa22.98■■□□□ 1.27
PSMD4-211ENST00000476855 POTEAQ6S8J7 498 aa22.97■■□□□ 1.27
PSMD4-211ENST00000476855 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
PSMD4-211ENST00000476855 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
PSMD4-211ENST00000476855 TMEM94Q12767 1356 aa22.95■■□□□ 1.26
PSMD4-211ENST00000476855 NEXMIFQ5QGS0 1516 aa22.95■■□□□ 1.26
PSMD4-211ENST00000476855 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.26
PSMD4-211ENST00000476855 STAG3Q9UJ98 1225 aa22.94■■□□□ 1.26
PSMD4-211ENST00000476855 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
PSMD4-211ENST00000476855 KCNA6P17658 529 aa22.91■■□□□ 1.26
PSMD4-211ENST00000476855 RGL3Q3MIN7 710 aa22.89■■□□□ 1.25
PSMD4-211ENST00000476855 PROSER2Q86WR7 435 aaPredicted RBP22.89■■□□□ 1.25
PSMD4-211ENST00000476855 ROBO1Q9Y6N7 1651 aa22.88■■□□□ 1.25
PSMD4-211ENST00000476855 MYOM2P54296 1465 aa22.88■■□□□ 1.25
PSMD4-211ENST00000476855 RBM33Q96EV2 1170 aaKnown RBP22.87■■□□□ 1.25
PSMD4-211ENST00000476855 SLC26A8Q96RN1 970 aa22.87■■□□□ 1.25
PSMD4-211ENST00000476855 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
PSMD4-211ENST00000476855 TRPM1Q7Z4N2 1603 aa22.86■■□□□ 1.25
PSMD4-211ENST00000476855 PPP1R15AO75807 674 aaPredicted RBP22.85■■□□□ 1.25
PSMD4-211ENST00000476855 ZFYVE9O95405 1425 aa22.84■■□□□ 1.25
PSMD4-211ENST00000476855 KIAA1210Q9ULL0 1709 aa22.84■■□□□ 1.25
PSMD4-211ENST00000476855 NRXN1Q9ULB1 1477 aa22.84■■□□□ 1.25
PSMD4-211ENST00000476855 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
PSMD4-211ENST00000476855 NKTRP30414 1462 aaKnown RBP22.81■■□□□ 1.24
PSMD4-211ENST00000476855 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
PSMD4-211ENST00000476855 PRAG1Q86YV5 1406 aa22.81■■□□□ 1.24
PSMD4-211ENST00000476855 MSH6P52701 1360 aa22.8■■□□□ 1.24
PSMD4-211ENST00000476855 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
PSMD4-211ENST00000476855 SLAIN2Q9P270 581 aa22.8■■□□□ 1.24
PSMD4-211ENST00000476855 RIMS2Q9UQ26 1411 aa22.8■■□□□ 1.24
PSMD4-211ENST00000476855 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
PSMD4-211ENST00000476855 BCANQ96GW7 911 aa22.78■■□□□ 1.24
PSMD4-211ENST00000476855 STAC3Q96MF2 364 aa22.78■■□□□ 1.24
PSMD4-211ENST00000476855 LAMC1P11047 1609 aa22.78■■□□□ 1.24
PSMD4-211ENST00000476855 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
PSMD4-211ENST00000476855 JCADQ9P266 1359 aa22.77■■□□□ 1.24
PSMD4-211ENST00000476855 NWD1Q149M9 1564 aa22.77■■□□□ 1.24
PSMD4-211ENST00000476855 NBPF8Q3BBV2 869 aa22.77■■□□□ 1.24
PSMD4-211ENST00000476855 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.24
PSMD4-211ENST00000476855 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
PSMD4-211ENST00000476855 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
PSMD4-211ENST00000476855 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
PSMD4-211ENST00000476855 ADGRF5Q8IZF2 1346 aa22.74■■□□□ 1.23
PSMD4-211ENST00000476855 SETBP1Q9Y6X0 1596 aa22.72■■□□□ 1.23
PSMD4-211ENST00000476855 VGFO15240 615 aaPredicted RBP22.69■■□□□ 1.22
PSMD4-211ENST00000476855 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
PSMD4-211ENST00000476855 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.68■■□□□ 1.22
PSMD4-211ENST00000476855 PLEKHG1Q9ULL1 1385 aa22.67■■□□□ 1.22
PSMD4-211ENST00000476855 SPATA31A6Q5VVP1 1343 aa22.67■■□□□ 1.22
PSMD4-211ENST00000476855 COL16A1Q07092 1604 aaPredicted RBP22.67■■□□□ 1.22
PSMD4-211ENST00000476855 ASXL1Q8IXJ9 1541 aa22.66■■□□□ 1.22
PSMD4-211ENST00000476855 HDGFP51858 240 aaKnown RBP22.65■■□□□ 1.22
PSMD4-211ENST00000476855 MEX3CQ5U5Q3 659 aaKnown RBP22.65■■□□□ 1.22
PSMD4-211ENST00000476855 ZNF772Q68DY9 489 aaPredicted RBP22.65■■□□□ 1.22
PSMD4-211ENST00000476855 ADGRB1O14514 1584 aa22.64■■□□□ 1.22
PSMD4-211ENST00000476855 UPF1Q92900 1129 aaKnown RBP eCLIP22.64■■□□□ 1.21
PSMD4-211ENST00000476855 NCOA3Q9Y6Q9 1424 aa22.64■■□□□ 1.21
PSMD4-211ENST00000476855 LRP6O75581 1613 aa22.64■■□□□ 1.21
PSMD4-211ENST00000476855 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
PSMD4-211ENST00000476855 C14orf37Q86TY3 774 aa22.63■■□□□ 1.21
PSMD4-211ENST00000476855 CHD2O14647 1828 aaKnown RBP22.63■■□□□ 1.21
PSMD4-211ENST00000476855 DIP2AQ14689 1571 aa22.63■■□□□ 1.21
PSMD4-211ENST00000476855 TBX22Q9Y458 520 aa22.62■■□□□ 1.21
PSMD4-211ENST00000476855 ADAMTS13Q76LX8 1427 aa22.61■■□□□ 1.21
PSMD4-211ENST00000476855 C14orf93Q9H972 538 aaKnown RBP22.6■■□□□ 1.21
PSMD4-211ENST00000476855 CFAP70Q5T0N1 1121 aa22.59■■□□□ 1.21
PSMD4-211ENST00000476855 CADPS2Q86UW7 1296 aa22.59■■□□□ 1.21
PSMD4-211ENST00000476855 KNDC1Q76NI1 1749 aa22.59■■□□□ 1.21
PSMD4-211ENST00000476855 ARHGEF28Q8N1W1 1705 aaKnown RBP22.58■■□□□ 1.21
PSMD4-211ENST00000476855 NBPF1Q3BBV0 1214 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms