RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 WASHC2AQ641Q2 1341 aa5.66□□□□□ -1.5
CD55-208ENST00000476590 HSP90AA2PQ14568 343 aaPredicted RBP5.66□□□□□ -1.5
CD55-208ENST00000476590 ZNF428Q96B54 188 aa5.65□□□□□ -1.5
CD55-208ENST00000476590 ZBTB7CA1YPR0 619 aa5.65□□□□□ -1.51
CD55-208ENST00000476590 TRIM67Q6ZTA4 783 aa5.65□□□□□ -1.51
CD55-208ENST00000476590 FAM43AQ8N2R8 423 aa5.65□□□□□ -1.51
CD55-208ENST00000476590 IPO4Q8TEX9 1081 aaKnown RBP5.65□□□□□ -1.51
CD55-208ENST00000476590 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.51
CD55-208ENST00000476590 GMPR2Q9P2T1 348 aaKnown RBP5.65□□□□□ -1.51
CD55-208ENST00000476590 HSP90B1P14625 803 aaKnown RBP5.64□□□□□ -1.51
CD55-208ENST00000476590 Q8N3U1 123 aa5.64□□□□□ -1.51
CD55-208ENST00000476590 RNF225M0QZC1 329 aaPredicted RBP5.63□□□□□ -1.51
CD55-208ENST00000476590 ADAM23O75077 832 aa5.63□□□□□ -1.51
CD55-208ENST00000476590 SOWAHBA6NEL2 793 aa5.63□□□□□ -1.51
CD55-208ENST00000476590 VASPP50552 380 aaPredicted RBP5.63□□□□□ -1.51
CD55-208ENST00000476590 GPAT2Q6NUI2 795 aa5.63□□□□□ -1.51
CD55-208ENST00000476590 ARID3CA6NKF2 412 aa5.62□□□□□ -1.51
CD55-208ENST00000476590 FOXK2Q01167 660 aa5.62□□□□□ -1.51
CD55-208ENST00000476590 BCCIPQ9P287 314 aaKnown RBP eCLIP5.62□□□□□ -1.51
CD55-208ENST00000476590 USP35Q9P2H5 1018 aa5.62□□□□□ -1.51
CD55-208ENST00000476590 CALD1Q05682 793 aaKnown RBP5.62□□□□□ -1.51
CD55-208ENST00000476590 CRIPAKQ8N1N5 446 aa5.62□□□□□ -1.51
CD55-208ENST00000476590 GMPRP36959 345 aa5.61□□□□□ -1.51
CD55-208ENST00000476590 BCAMP50895 628 aa5.61□□□□□ -1.51
CD55-208ENST00000476590 CHMP4BQ9H444 224 aaKnown RBP5.61□□□□□ -1.51
CD55-208ENST00000476590 PRDM4Q9UKN5 801 aa5.6□□□□□ -1.51
CD55-208ENST00000476590 BRPF3Q9ULD4 1205 aa5.6□□□□□ -1.51
CD55-208ENST00000476590 HSP90AA1P07900 732 aaKnown RBP5.6□□□□□ -1.51
CD55-208ENST00000476590 CANXP27824 592 aaKnown RBP5.6□□□□□ -1.51
CD55-208ENST00000476590 GGCXP38435 758 aa5.6□□□□□ -1.51
CD55-208ENST00000476590 ITGAEP38570 1179 aa5.6□□□□□ -1.51
CD55-208ENST00000476590 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
CD55-208ENST00000476590 WBP1LQ9NX94 342 aa5.6□□□□□ -1.51
CD55-208ENST00000476590 GTF2E1P29083 439 aaPredicted RBP5.59□□□□□ -1.51
CD55-208ENST00000476590 PROM2Q8N271 834 aa5.59□□□□□ -1.51
CD55-208ENST00000476590 NEFMP07197 916 aa5.59□□□□□ -1.52
CD55-208ENST00000476590 PUS7Q96PZ0 661 aaKnown RBP5.59□□□□□ -1.52
CD55-208ENST00000476590 CENPJQ9HC77 1338 aaPredicted RBP5.58□□□□□ -1.52
CD55-208ENST00000476590 RGL2O15211 777 aa5.58□□□□□ -1.52
CD55-208ENST00000476590 CHRM1P11229 460 aaPredicted RBP5.58□□□□□ -1.52
CD55-208ENST00000476590 CNGB1Q14028 1251 aaPredicted RBP5.58□□□□□ -1.52
CD55-208ENST00000476590 NEUROD2Q15784 382 aa5.58□□□□□ -1.52
CD55-208ENST00000476590 TEX2Q8IWB9 1127 aa5.58□□□□□ -1.52
CD55-208ENST00000476590 ZFP91Q96JP5 570 aaPredicted RBP5.57□□□□□ -1.52
CD55-208ENST00000476590 KDM4FA0A1W2PPD8 638 aa5.57□□□□□ -1.52
CD55-208ENST00000476590 HMGB1P09429 215 aaKnown RBP5.57□□□□□ -1.52
CD55-208ENST00000476590 FTSJ3Q8IY81 847 aaKnown RBP5.57□□□□□ -1.52
CD55-208ENST00000476590 ZBED2Q9BTP6 218 aa5.57□□□□□ -1.52
CD55-208ENST00000476590 DNMT3AQ9Y6K1 912 aaPredicted RBP5.57□□□□□ -1.52
CD55-208ENST00000476590 ECM2O94769 699 aaPredicted RBP5.56□□□□□ -1.52
CD55-208ENST00000476590 NCLP19338 710 aaKnown RBP5.56□□□□□ -1.52
CD55-208ENST00000476590 IRF7Q92985 503 aa5.56□□□□□ -1.52
CD55-208ENST00000476590 RAD21O60216 631 aa5.56□□□□□ -1.52
CD55-208ENST00000476590 PPM1GO15355 546 aaPredicted RBP5.55□□□□□ -1.52
CD55-208ENST00000476590 FOXD4L5Q5VV16 416 aaPredicted RBP5.55□□□□□ -1.52
CD55-208ENST00000476590 RGS22Q8NE09 1264 aa5.55□□□□□ -1.52
CD55-208ENST00000476590 FOXD4L4Q8WXT5 416 aaPredicted RBP5.55□□□□□ -1.52
CD55-208ENST00000476590 MTMR7Q9Y216 660 aa5.55□□□□□ -1.52
CD55-208ENST00000476590 IPO9Q96P70 1041 aaKnown RBP5.55□□□□□ -1.52
CD55-208ENST00000476590 GOLGA2P5Q9HBQ8 144 aa5.55□□□□□ -1.52
CD55-208ENST00000476590 RGS3P49796 1198 aa5.54□□□□□ -1.52
CD55-208ENST00000476590 POLR3GLQ9BT43 218 aa5.54□□□□□ -1.52
CD55-208ENST00000476590 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
CD55-208ENST00000476590 ANP32AP39687 249 aaKnown RBP5.53□□□□□ -1.52
CD55-208ENST00000476590 GSE1Q14687 1217 aa5.53□□□□□ -1.52
CD55-208ENST00000476590 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
CD55-208ENST00000476590 RBM25P49756 843 aaKnown RBP5.53□□□□□ -1.52
CD55-208ENST00000476590 SECISBP2LQ93073 1101 aaKnown RBP5.53□□□□□ -1.52
CD55-208ENST00000476590 APBB1O00213 710 aa5.52□□□□□ -1.53
CD55-208ENST00000476590 LAPTM4BQ86VI4 370 aa5.52□□□□□ -1.53
CD55-208ENST00000476590 DACH1Q9UI36 760 aa5.52□□□□□ -1.53
CD55-208ENST00000476590 PDCL3Q9H2J4 239 aa5.52□□□□□ -1.53
CD55-208ENST00000476590 BCL2L12Q9HB09 334 aa5.52□□□□□ -1.53
CD55-208ENST00000476590 AXIN1O15169 862 aa5.51□□□□□ -1.53
CD55-208ENST00000476590 CHGAP10645 457 aaKnown RBP5.51□□□□□ -1.53
CD55-208ENST00000476590 PTPREP23469 700 aa5.51□□□□□ -1.53
CD55-208ENST00000476590 KRTAP19-1Q8IUB9 90 aa5.51□□□□□ -1.53
CD55-208ENST00000476590 LMOD2Q6P5Q4 547 aa5.5□□□□□ -1.53
CD55-208ENST00000476590 ZNF598Q86UK7 904 aaKnown RBP5.5□□□□□ -1.53
CD55-208ENST00000476590 TMUB1Q9BVT8 246 aa5.5□□□□□ -1.53
CD55-208ENST00000476590 IL21Q9HBE4 155 aa5.5□□□□□ -1.53
CD55-208ENST00000476590 TSR3Q9UJK0 312 aaKnown RBP5.5□□□□□ -1.53
CD55-208ENST00000476590 SLC19A1P41440 591 aa5.5□□□□□ -1.53
CD55-208ENST00000476590 IRX6P78412 446 aaPredicted RBP5.5□□□□□ -1.53
CD55-208ENST00000476590 CTC1Q2NKJ3 1217 aa5.5□□□□□ -1.53
CD55-208ENST00000476590 TJAP1Q5JTD0 557 aa5.5□□□□□ -1.53
CD55-208ENST00000476590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD55-208ENST00000476590 KIF3CO14782 793 aa5.49□□□□□ -1.53
CD55-208ENST00000476590 SENP2Q9HC62 589 aa5.49□□□□□ -1.53
CD55-208ENST00000476590 VGFO15240 615 aaPredicted RBP5.49□□□□□ -1.53
CD55-208ENST00000476590 NPAS3Q8IXF0 933 aa5.48□□□□□ -1.53
CD55-208ENST00000476590 EFCAB3Q8N7B9 438 aa5.48□□□□□ -1.53
CD55-208ENST00000476590 PNNQ9H307 717 aaKnown RBP5.48□□□□□ -1.53
CD55-208ENST00000476590 SLC24A3Q9HC58 644 aa5.48□□□□□ -1.53
CD55-208ENST00000476590 SMAP1Q8IYB5 467 aaPredicted RBP5.47□□□□□ -1.53
CD55-208ENST00000476590 CNPY4Q8N129 248 aa5.47□□□□□ -1.53
CD55-208ENST00000476590 C2orf72A6NCS6 295 aa5.46□□□□□ -1.53
CD55-208ENST00000476590 AEBP1Q8IUX7 1158 aa5.46□□□□□ -1.54
CD55-208ENST00000476590 ZNF830Q96NB3 372 aaPredicted RBP5.46□□□□□ -1.54
CD55-208ENST00000476590 RRAGDQ9NQL2 400 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms