RNA–Protein interactions for RNA: ENST00000475988.1

PKP1-204, Transcript of plakophilin 1, humanhuman

TSL 3

Gene PKP1, Length 931 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-204ENST00000475988 SETBP1Q9Y6X0 1596 aa18.9■□□□□ 0.62
PKP1-204ENST00000475988 MIER1Q8N108 512 aa18.9■□□□□ 0.62
PKP1-204ENST00000475988 PIK3C2GO75747 1445 aa18.9■□□□□ 0.62
PKP1-204ENST00000475988 ZFYVE9O95405 1425 aa18.9■□□□□ 0.62
PKP1-204ENST00000475988 C11orf95C9JLR9 678 aaPredicted RBP18.89■□□□□ 0.61
PKP1-204ENST00000475988 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
PKP1-204ENST00000475988 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
PKP1-204ENST00000475988 KDM4FA0A1W2PPD8 638 aa18.87■□□□□ 0.61
PKP1-204ENST00000475988 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
PKP1-204ENST00000475988 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
PKP1-204ENST00000475988 IDI1Q13907 227 aa18.87■□□□□ 0.61
PKP1-204ENST00000475988 ZMYM3Q14202 1370 aa18.86■□□□□ 0.61
PKP1-204ENST00000475988 KIF7Q2M1P5 1343 aa18.86■□□□□ 0.61
PKP1-204ENST00000475988 ADGRF5Q8IZF2 1346 aa18.86■□□□□ 0.61
PKP1-204ENST00000475988 SCAF11Q99590 1463 aaKnown RBP18.85■□□□□ 0.61
PKP1-204ENST00000475988 FBXO31Q5XUX0 539 aaPredicted RBP18.85■□□□□ 0.61
PKP1-204ENST00000475988 ADGRB1O14514 1584 aa18.84■□□□□ 0.61
PKP1-204ENST00000475988 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.61
PKP1-204ENST00000475988 MYO3AQ8NEV4 1616 aa18.83■□□□□ 0.61
PKP1-204ENST00000475988 MLECQ14165 292 aa18.82■□□□□ 0.6
PKP1-204ENST00000475988 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
PKP1-204ENST00000475988 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
PKP1-204ENST00000475988 C3P01024 1663 aa18.8■□□□□ 0.6
PKP1-204ENST00000475988 TESK2Q96S53 571 aa18.79■□□□□ 0.6
PKP1-204ENST00000475988 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
PKP1-204ENST00000475988 C14orf93Q9H972 538 aaKnown RBP18.78■□□□□ 0.6
PKP1-204ENST00000475988 TNRQ92752 1358 aa18.77■□□□□ 0.6
PKP1-204ENST00000475988 CFAP70Q5T0N1 1121 aa18.76■□□□□ 0.59
PKP1-204ENST00000475988 UBR1Q8IWV7 1749 aa18.76■□□□□ 0.59
PKP1-204ENST00000475988 ASXL1Q8IXJ9 1541 aa18.75■□□□□ 0.59
PKP1-204ENST00000475988 VGFO15240 615 aaPredicted RBP18.75■□□□□ 0.59
PKP1-204ENST00000475988 ESF1Q9H501 851 aaKnown RBP18.75■□□□□ 0.59
PKP1-204ENST00000475988 NLRP1Q9C000 1473 aa18.74■□□□□ 0.59
PKP1-204ENST00000475988 EIF3AQ14152 1382 aaKnown RBP18.74■□□□□ 0.59
PKP1-204ENST00000475988 ADAMTSL3P82987 1691 aa18.73■□□□□ 0.59
PKP1-204ENST00000475988 SETD1AO15047 1707 aaKnown RBP18.72■□□□□ 0.59
PKP1-204ENST00000475988 DISP3Q9P2K9 1392 aa18.72■□□□□ 0.59
PKP1-204ENST00000475988 SBNO2Q9Y2G9 1366 aa18.72■□□□□ 0.59
PKP1-204ENST00000475988 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
PKP1-204ENST00000475988 RIMS2Q9UQ26 1411 aa18.7■□□□□ 0.58
PKP1-204ENST00000475988 NRXN3Q9Y4C0 1643 aa18.7■□□□□ 0.58
PKP1-204ENST00000475988 ALKQ9UM73 1620 aa18.68■□□□□ 0.58
PKP1-204ENST00000475988 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
PKP1-204ENST00000475988 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
PKP1-204ENST00000475988 ANP32CO43423 234 aa18.66■□□□□ 0.58
PKP1-204ENST00000475988 MYOM1P52179 1685 aa18.66■□□□□ 0.58
PKP1-204ENST00000475988 RIMS1Q86UR5 1692 aaKnown RBP18.66■□□□□ 0.58
PKP1-204ENST00000475988 PTPRMP28827 1452 aa18.65■□□□□ 0.58
PKP1-204ENST00000475988 TMF1P82094 1093 aa18.65■□□□□ 0.58
PKP1-204ENST00000475988 ARHGAP23Q9P227 1491 aa18.64■□□□□ 0.57
PKP1-204ENST00000475988 SLIT1O75093 1534 aa18.64■□□□□ 0.57
PKP1-204ENST00000475988 TMEM2Q9UHN6 1383 aa18.63■□□□□ 0.57
PKP1-204ENST00000475988 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
PKP1-204ENST00000475988 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
PKP1-204ENST00000475988 DLC1Q96QB1 1528 aa18.61■□□□□ 0.57
PKP1-204ENST00000475988 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.61■□□□□ 0.57
PKP1-204ENST00000475988 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
PKP1-204ENST00000475988 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
PKP1-204ENST00000475988 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
PKP1-204ENST00000475988 CENPJQ9HC77 1338 aaPredicted RBP18.59■□□□□ 0.57
PKP1-204ENST00000475988 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
PKP1-204ENST00000475988 KNDC1Q76NI1 1749 aa18.59■□□□□ 0.57
PKP1-204ENST00000475988 PRKRIP1Q9H875 184 aaPredicted RBP18.58■□□□□ 0.56
PKP1-204ENST00000475988 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
PKP1-204ENST00000475988 CDCA8Q53HL2 280 aa18.57■□□□□ 0.56
PKP1-204ENST00000475988 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
PKP1-204ENST00000475988 TULP4Q9NRJ4 1543 aa18.55■□□□□ 0.56
PKP1-204ENST00000475988 MED14O60244 1454 aa18.55■□□□□ 0.56
PKP1-204ENST00000475988 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
PKP1-204ENST00000475988 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
PKP1-204ENST00000475988 TRAK1Q9UPV9 953 aa18.54■□□□□ 0.56
PKP1-204ENST00000475988 KTN1Q86UP2 1357 aaKnown RBP18.54■□□□□ 0.56
PKP1-204ENST00000475988 TECPR2O15040 1411 aa18.53■□□□□ 0.56
PKP1-204ENST00000475988 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
PKP1-204ENST00000475988 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
PKP1-204ENST00000475988 ADAMTS13Q76LX8 1427 aa18.53■□□□□ 0.56
PKP1-204ENST00000475988 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
PKP1-204ENST00000475988 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
PKP1-204ENST00000475988 CPS1P31327 1500 aa18.52■□□□□ 0.56
PKP1-204ENST00000475988 ABCC11Q96J66 1382 aa18.51■□□□□ 0.55
PKP1-204ENST00000475988 DIP2AQ14689 1571 aa18.51■□□□□ 0.55
PKP1-204ENST00000475988 METP08581 1390 aa18.48■□□□□ 0.55
PKP1-204ENST00000475988 PARD3Q8TEW0 1356 aa18.48■□□□□ 0.55
PKP1-204ENST00000475988 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
PKP1-204ENST00000475988 LTKP29376 864 aa18.47■□□□□ 0.55
PKP1-204ENST00000475988 PANK3Q9H999 370 aa18.46■□□□□ 0.55
PKP1-204ENST00000475988 FAM135BQ49AJ0 1406 aa18.46■□□□□ 0.55
PKP1-204ENST00000475988 NPC1L1Q9UHC9 1359 aa18.45■□□□□ 0.54
PKP1-204ENST00000475988 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
PKP1-204ENST00000475988 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
PKP1-204ENST00000475988 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
PKP1-204ENST00000475988 RALBP1Q15311 655 aa18.43■□□□□ 0.54
PKP1-204ENST00000475988 EVC2Q86UK5 1308 aa18.43■□□□□ 0.54
PKP1-204ENST00000475988 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
PKP1-204ENST00000475988 YTHDC1Q96MU7 727 aaKnown RBP18.42■□□□□ 0.54
PKP1-204ENST00000475988 ADGRB2O60241 1585 aa18.42■□□□□ 0.54
PKP1-204ENST00000475988 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
PKP1-204ENST00000475988 PRAM1Q96QH2 718 aa18.41■□□□□ 0.54
PKP1-204ENST00000475988 STK26Q9P289 416 aa18.41■□□□□ 0.54
PKP1-204ENST00000475988 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms