RNA–Protein interactions for RNA: ENST00000475770.5

KRIT1-221, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 1 (best)

Gene KRIT1, Length 2,411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-221ENST00000475770 PTPRTO14522 1441 aa11.36□□□□□ -0.59
KRIT1-221ENST00000475770 CLTCQ00610 1675 aaKnown RBP11.35□□□□□ -0.59
KRIT1-221ENST00000475770 CCDC144AA2RUR9 1427 aa11.34□□□□□ -0.59
KRIT1-221ENST00000475770 TRPM2O94759 1503 aa11.34□□□□□ -0.59
KRIT1-221ENST00000475770 CNTLNQ9NXG0 1405 aa11.34□□□□□ -0.59
KRIT1-221ENST00000475770 ZMYM3Q14202 1370 aa11.33□□□□□ -0.6
KRIT1-221ENST00000475770 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
KRIT1-221ENST00000475770 NOS1P29475 1434 aa11.32□□□□□ -0.6
KRIT1-221ENST00000475770 SPHKAPQ2M3C7 1700 aa11.32□□□□□ -0.6
KRIT1-221ENST00000475770 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
KRIT1-221ENST00000475770 UGGT1Q9NYU2 1555 aa11.31□□□□□ -0.6
KRIT1-221ENST00000475770 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
KRIT1-221ENST00000475770 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
KRIT1-221ENST00000475770 FER1L4A9Z1Z3 1794 aa11.3□□□□□ -0.6
KRIT1-221ENST00000475770 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
KRIT1-221ENST00000475770 TONSLQ96HA7 1378 aa11.3□□□□□ -0.6
KRIT1-221ENST00000475770 SYNMO15061 1565 aa11.3□□□□□ -0.6
KRIT1-221ENST00000475770 CLTCL1P53675 1640 aa11.3□□□□□ -0.6
KRIT1-221ENST00000475770 MROH2AA6NES4 1674 aa11.29□□□□□ -0.6
KRIT1-221ENST00000475770 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
KRIT1-221ENST00000475770 PREX1Q8TCU6 1659 aa11.29□□□□□ -0.6
KRIT1-221ENST00000475770 SPATA31D1Q6ZQQ2 1576 aa11.28□□□□□ -0.6
KRIT1-221ENST00000475770 CEBPAP49715 358 aaPredicted RBP11.28□□□□□ -0.6
KRIT1-221ENST00000475770 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
KRIT1-221ENST00000475770 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
KRIT1-221ENST00000475770 SPATA31E1Q6ZUB1 1445 aa11.26□□□□□ -0.61
KRIT1-221ENST00000475770 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
KRIT1-221ENST00000475770 PIK3C2BO00750 1634 aa11.26□□□□□ -0.61
KRIT1-221ENST00000475770 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
KRIT1-221ENST00000475770 SLC52A1Q9NWF4 448 aa11.26□□□□□ -0.61
KRIT1-221ENST00000475770 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
KRIT1-221ENST00000475770 C3P01024 1663 aa11.25□□□□□ -0.61
KRIT1-221ENST00000475770 IDI1Q13907 227 aa11.25□□□□□ -0.61
KRIT1-221ENST00000475770 RGL3Q3MIN7 710 aa11.25□□□□□ -0.61
KRIT1-221ENST00000475770 TNRQ92752 1358 aa11.24□□□□□ -0.61
KRIT1-221ENST00000475770 AAMPQ13685 434 aa11.24□□□□□ -0.61
KRIT1-221ENST00000475770 ADGRB3O60242 1522 aa11.24□□□□□ -0.61
KRIT1-221ENST00000475770 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
KRIT1-221ENST00000475770 NEURL4Q96JN8 1562 aa11.22□□□□□ -0.61
KRIT1-221ENST00000475770 PTPRMP28827 1452 aa11.22□□□□□ -0.61
KRIT1-221ENST00000475770 PPP1R15AO75807 674 aaPredicted RBP11.21□□□□□ -0.61
KRIT1-221ENST00000475770 POTEHQ6S545 545 aa11.21□□□□□ -0.61
KRIT1-221ENST00000475770 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
KRIT1-221ENST00000475770 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.61
KRIT1-221ENST00000475770 BCCIPQ9P287 314 aaKnown RBP eCLIP11.21□□□□□ -0.61
KRIT1-221ENST00000475770 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
KRIT1-221ENST00000475770 KIF1BO60333 1816 aa11.2□□□□□ -0.62
KRIT1-221ENST00000475770 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
KRIT1-221ENST00000475770 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
KRIT1-221ENST00000475770 TMEM131LA2VDJ0 1609 aa11.19□□□□□ -0.62
KRIT1-221ENST00000475770 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
KRIT1-221ENST00000475770 A2ML1A8K2U0 1454 aa11.18□□□□□ -0.62
KRIT1-221ENST00000475770 NBPF8Q3BBV2 869 aa11.17□□□□□ -0.62
KRIT1-221ENST00000475770 DIEXFQ68CQ4 756 aaKnown RBP11.17□□□□□ -0.62
KRIT1-221ENST00000475770 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
KRIT1-221ENST00000475770 UHRF1BP1Q6BDS2 1440 aa11.16□□□□□ -0.62
KRIT1-221ENST00000475770 PRAG1Q86YV5 1406 aa11.16□□□□□ -0.62
KRIT1-221ENST00000475770 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
KRIT1-221ENST00000475770 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
KRIT1-221ENST00000475770 NEXMIFQ5QGS0 1516 aa11.16□□□□□ -0.62
KRIT1-221ENST00000475770 RPGRIP1LQ68CZ1 1315 aa11.16□□□□□ -0.62
KRIT1-221ENST00000475770 MYOM2P54296 1465 aa11.15□□□□□ -0.62
KRIT1-221ENST00000475770 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
KRIT1-221ENST00000475770 NUTM2DQ5VT03 806 aaPredicted RBP11.15□□□□□ -0.63
KRIT1-221ENST00000475770 ADGRF5Q8IZF2 1346 aa11.14□□□□□ -0.63
KRIT1-221ENST00000475770 CEP170BQ9Y4F5 1589 aaPredicted RBP11.14□□□□□ -0.63
KRIT1-221ENST00000475770 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
KRIT1-221ENST00000475770 IFT172Q9UG01 1749 aa11.14□□□□□ -0.63
KRIT1-221ENST00000475770 MYO5BQ9ULV0 1848 aa11.14□□□□□ -0.63
KRIT1-221ENST00000475770 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
KRIT1-221ENST00000475770 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
KRIT1-221ENST00000475770 KDM5AP29375 1690 aaKnown RBP11.13□□□□□ -0.63
KRIT1-221ENST00000475770 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
KRIT1-221ENST00000475770 NRXN1Q9ULB1 1477 aa11.13□□□□□ -0.63
KRIT1-221ENST00000475770 PPLO60437 1756 aa11.13□□□□□ -0.63
KRIT1-221ENST00000475770 ZFYVE9O95405 1425 aa11.13□□□□□ -0.63
KRIT1-221ENST00000475770 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
KRIT1-221ENST00000475770 TMEM2Q9UHN6 1383 aa11.13□□□□□ -0.63
KRIT1-221ENST00000475770 PIK3C2GO75747 1445 aa11.12□□□□□ -0.63
KRIT1-221ENST00000475770 VGFO15240 615 aaPredicted RBP11.11□□□□□ -0.63
KRIT1-221ENST00000475770 RALGAPBQ86X10 1494 aa11.11□□□□□ -0.63
KRIT1-221ENST00000475770 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
KRIT1-221ENST00000475770 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
KRIT1-221ENST00000475770 THEMISQ8N1K5 641 aaPredicted RBP11.1□□□□□ -0.63
KRIT1-221ENST00000475770 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
KRIT1-221ENST00000475770 SLIT1O75093 1534 aa11.1□□□□□ -0.63
KRIT1-221ENST00000475770 NAP1L5Q96NT1 182 aaPredicted RBP11.09□□□□□ -0.63
KRIT1-221ENST00000475770 ARHGAP23Q9P227 1491 aa11.09□□□□□ -0.63
KRIT1-221ENST00000475770 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
KRIT1-221ENST00000475770 NBPF1Q3BBV0 1214 aa11.09□□□□□ -0.63
KRIT1-221ENST00000475770 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
KRIT1-221ENST00000475770 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
KRIT1-221ENST00000475770 IGSF3O75054 1194 aa11.08□□□□□ -0.64
KRIT1-221ENST00000475770 LTKP29376 864 aa11.08□□□□□ -0.64
KRIT1-221ENST00000475770 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
KRIT1-221ENST00000475770 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
KRIT1-221ENST00000475770 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
KRIT1-221ENST00000475770 TXNDC2Q86VQ3 553 aa11.07□□□□□ -0.64
KRIT1-221ENST00000475770 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
KRIT1-221ENST00000475770 EID1Q9Y6B2 187 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms