RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 TESK2Q96S53 571 aa23.03■■□□□ 1.28
CCM2-207ENST00000475551 PRDM15P57071 1507 aaPredicted RBP23.03■■□□□ 1.28
CCM2-207ENST00000475551 ADAMTS8Q9UP79 889 aa23.02■■□□□ 1.28
CCM2-207ENST00000475551 DISP3Q9P2K9 1392 aa23.02■■□□□ 1.28
CCM2-207ENST00000475551 ZNF521Q96K83 1311 aa23.02■■□□□ 1.28
CCM2-207ENST00000475551 EFCAB2Q5VUJ9 269 aa23.01■■□□□ 1.27
CCM2-207ENST00000475551 SAMD9LQ8IVG5 1584 aa23.01■■□□□ 1.27
CCM2-207ENST00000475551 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
CCM2-207ENST00000475551 PLEKHH1Q9ULM0 1364 aa23■■□□□ 1.27
CCM2-207ENST00000475551 FANCAO15360 1455 aa23■■□□□ 1.27
CCM2-207ENST00000475551 ARAP3Q8WWN8 1544 aa23■■□□□ 1.27
CCM2-207ENST00000475551 NBPF1Q3BBV0 1214 aa23■■□□□ 1.27
CCM2-207ENST00000475551 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
CCM2-207ENST00000475551 ERBINQ96RT1 1412 aa22.99■■□□□ 1.27
CCM2-207ENST00000475551 GOLGA2Q08379 1002 aa22.98■■□□□ 1.27
CCM2-207ENST00000475551 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
CCM2-207ENST00000475551 TSPY4P0CV99 314 aa22.97■■□□□ 1.27
CCM2-207ENST00000475551 TSPY10P0CW01 314 aa22.97■■□□□ 1.27
CCM2-207ENST00000475551 RGS3P49796 1198 aa22.97■■□□□ 1.27
CCM2-207ENST00000475551 CCDC144AA2RUR9 1427 aa22.96■■□□□ 1.27
CCM2-207ENST00000475551 FAM135AQ9P2D6 1515 aa22.96■■□□□ 1.27
CCM2-207ENST00000475551 HNRNPMP52272 730 aaKnown RBP eCLIP22.96■■□□□ 1.272e-6■■■□□ 15.7
CCM2-207ENST00000475551 TMF1P82094 1093 aa22.95■■□□□ 1.26
CCM2-207ENST00000475551 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
CCM2-207ENST00000475551 PPRC1Q5VV67 1664 aaKnown RBP22.94■■□□□ 1.26
CCM2-207ENST00000475551 SYCP2Q9BX26 1530 aa22.93■■□□□ 1.26
CCM2-207ENST00000475551 A2MP01023 1474 aa22.93■■□□□ 1.26
CCM2-207ENST00000475551 USP19O94966 1318 aa22.93■■□□□ 1.26
CCM2-207ENST00000475551 SLFN5Q08AF3 891 aa22.92■■□□□ 1.26
CCM2-207ENST00000475551 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
CCM2-207ENST00000475551 TRMT2AQ8IZ69 625 aaKnown RBP22.91■■□□□ 1.26
CCM2-207ENST00000475551 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
CCM2-207ENST00000475551 ARHGEF5Q12774 1597 aa22.91■■□□□ 1.26
CCM2-207ENST00000475551 ABCC1P33527 1531 aa22.91■■□□□ 1.26
CCM2-207ENST00000475551 PPP2R1AP30153 589 aa22.9■■□□□ 1.26
CCM2-207ENST00000475551 ADGRL1O94910 1474 aa22.89■■□□□ 1.26
CCM2-207ENST00000475551 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.25
CCM2-207ENST00000475551 L1TD1Q5T7N2 865 aaKnown RBP22.88■■□□□ 1.25
CCM2-207ENST00000475551 BECN1Q14457 450 aa22.88■■□□□ 1.25
CCM2-207ENST00000475551 POGKQ9P215 609 aa22.87■■□□□ 1.25
CCM2-207ENST00000475551 NEO1Q92859 1461 aa22.87■■□□□ 1.25
CCM2-207ENST00000475551 RGL3Q3MIN7 710 aa22.87■■□□□ 1.25
CCM2-207ENST00000475551 SCAPERQ9BY12 1400 aa22.87■■□□□ 1.25
CCM2-207ENST00000475551 PLA2R1Q13018 1463 aa22.86■■□□□ 1.25
CCM2-207ENST00000475551 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
CCM2-207ENST00000475551 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
CCM2-207ENST00000475551 MAGI2Q86UL8 1455 aa22.85■■□□□ 1.25
CCM2-207ENST00000475551 TRAPPC8Q9Y2L5 1435 aa22.85■■□□□ 1.25
CCM2-207ENST00000475551 MAPK8IP3Q9UPT6 1336 aa22.84■■□□□ 1.25
CCM2-207ENST00000475551 KNSTRNQ9Y448 316 aa22.83■■□□□ 1.25
CCM2-207ENST00000475551 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
CCM2-207ENST00000475551 AFAP1Q8N556 730 aa22.83■■□□□ 1.24
CCM2-207ENST00000475551 IGHDP01880 384 aa22.82■■□□□ 1.24
CCM2-207ENST00000475551 AMER1Q5JTC6 1135 aaPredicted RBP22.82■■□□□ 1.24
CCM2-207ENST00000475551 RRAGDQ9NQL2 400 aaPredicted RBP22.81■■□□□ 1.24
CCM2-207ENST00000475551 CGNL1Q0VF96 1302 aa22.8■■□□□ 1.24
CCM2-207ENST00000475551 RNF17Q9BXT8 1623 aaKnown RBP22.8■■□□□ 1.24
CCM2-207ENST00000475551 NLRP1Q9C000 1473 aa22.79■■□□□ 1.24
CCM2-207ENST00000475551 UNC13BO14795 1591 aa22.79■■□□□ 1.24
CCM2-207ENST00000475551 ANTXR1Q9H6X2 564 aa22.79■■□□□ 1.24
CCM2-207ENST00000475551 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
CCM2-207ENST00000475551 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
CCM2-207ENST00000475551 NINLQ9Y2I6 1382 aa22.78■■□□□ 1.24
CCM2-207ENST00000475551 RAPGEF3O95398 923 aa22.78■■□□□ 1.24
CCM2-207ENST00000475551 BCAR3O75815 825 aa22.77■■□□□ 1.24
CCM2-207ENST00000475551 SEC24BO95487 1268 aa22.77■■□□□ 1.24
CCM2-207ENST00000475551 E9PSI1 815 aa22.77■■□□□ 1.24
CCM2-207ENST00000475551 SPINK5Q9NQ38 1064 aaPredicted RBP22.76■■□□□ 1.23
CCM2-207ENST00000475551 SYNMO15061 1565 aa22.76■■□□□ 1.23
CCM2-207ENST00000475551 NPC1L1Q9UHC9 1359 aa22.76■■□□□ 1.23
CCM2-207ENST00000475551 POGZQ7Z3K3 1410 aa22.76■■□□□ 1.23
CCM2-207ENST00000475551 ASXL1Q8IXJ9 1541 aa22.75■■□□□ 1.23
CCM2-207ENST00000475551 ATP10AO60312 1499 aa22.75■■□□□ 1.23
CCM2-207ENST00000475551 NGEFQ8N5V2 710 aa22.74■■□□□ 1.23
CCM2-207ENST00000475551 SLKQ9H2G2 1235 aaPredicted RBP22.74■■□□□ 1.23
CCM2-207ENST00000475551 ZMYM3Q14202 1370 aa22.74■■□□□ 1.23
CCM2-207ENST00000475551 ZNF518AQ6AHZ1 1483 aa22.74■■□□□ 1.23
CCM2-207ENST00000475551 CLUAP1Q96AJ1 413 aa22.73■■□□□ 1.23
CCM2-207ENST00000475551 SPAG9O60271 1321 aaKnown RBP22.72■■□□□ 1.23
CCM2-207ENST00000475551 CDCA8Q53HL2 280 aa22.72■■□□□ 1.23
CCM2-207ENST00000475551 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
CCM2-207ENST00000475551 RICTORQ6R327 1708 aa22.71■■□□□ 1.23
CCM2-207ENST00000475551 APAF1O14727 1248 aa22.71■■□□□ 1.23
CCM2-207ENST00000475551 PLXNC1O60486 1568 aa22.71■■□□□ 1.23
CCM2-207ENST00000475551 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
CCM2-207ENST00000475551 FRMPD1Q5SYB0 1578 aa22.7■■□□□ 1.22
CCM2-207ENST00000475551 MAST1Q9Y2H9 1570 aa22.69■■□□□ 1.22
CCM2-207ENST00000475551 FSD2A1L4K1 749 aa22.69■■□□□ 1.22
CCM2-207ENST00000475551 TBC1D32Q96NH3 1257 aa22.69■■□□□ 1.22
CCM2-207ENST00000475551 UPF2Q9HAU5 1272 aaKnown RBP22.69■■□□□ 1.22
CCM2-207ENST00000475551 AAMPQ13685 434 aa22.68■■□□□ 1.22
CCM2-207ENST00000475551 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
CCM2-207ENST00000475551 ZFYVE16Q7Z3T8 1539 aa22.68■■□□□ 1.22
CCM2-207ENST00000475551 GOLGA6L3A6NEY3 463 aa22.67■■□□□ 1.22
CCM2-207ENST00000475551 XRCC6P12956 609 aaKnown RBP eCLIP22.67■■□□□ 1.22
CCM2-207ENST00000475551 ATP7AQ04656 1500 aa22.66■■□□□ 1.22
CCM2-207ENST00000475551 INO80Q9ULG1 1556 aaPredicted RBP22.66■■□□□ 1.22
CCM2-207ENST00000475551 TBC1D2Q9BYX2 928 aa22.66■■□□□ 1.22
CCM2-207ENST00000475551 CENPJQ9HC77 1338 aaPredicted RBP22.65■■□□□ 1.22
CCM2-207ENST00000475551 PMFBP1Q8TBY8 1022 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms