RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
ITGA6-210ENST00000475302 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
ITGA6-210ENST00000475302 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
ITGA6-210ENST00000475302 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
ITGA6-210ENST00000475302 TEX14Q8IWB6 1497 aa13.97□□□□□ -0.17
ITGA6-210ENST00000475302 RICTORQ6R327 1708 aa13.96□□□□□ -0.17
ITGA6-210ENST00000475302 FAM69CQ0P6D2 419 aa13.96□□□□□ -0.17
ITGA6-210ENST00000475302 MROH1Q8NDA8 1641 aa13.96□□□□□ -0.17
ITGA6-210ENST00000475302 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.18
ITGA6-210ENST00000475302 TONSLQ96HA7 1378 aa13.96□□□□□ -0.18
ITGA6-210ENST00000475302 ATP10AO60312 1499 aa13.95□□□□□ -0.18
ITGA6-210ENST00000475302 HECW2Q9P2P5 1572 aa13.95□□□□□ -0.18
ITGA6-210ENST00000475302 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
ITGA6-210ENST00000475302 BCORL1Q5H9F3 1711 aa13.94□□□□□ -0.18
ITGA6-210ENST00000475302 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
ITGA6-210ENST00000475302 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
ITGA6-210ENST00000475302 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
ITGA6-210ENST00000475302 A2MP01023 1474 aa13.93□□□□□ -0.18
ITGA6-210ENST00000475302 PRDM15P57071 1507 aaPredicted RBP13.92□□□□□ -0.18
ITGA6-210ENST00000475302 RAPGEF3O95398 923 aa13.92□□□□□ -0.18
ITGA6-210ENST00000475302 ZMYM4Q5VZL5 1548 aa13.91□□□□□ -0.18
ITGA6-210ENST00000475302 RNF17Q9BXT8 1623 aaKnown RBP13.91□□□□□ -0.18
ITGA6-210ENST00000475302 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
ITGA6-210ENST00000475302 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
ITGA6-210ENST00000475302 DIP2CQ9Y2E4 1556 aa13.9□□□□□ -0.18
ITGA6-210ENST00000475302 ATMINO43313 823 aaPredicted RBP13.89□□□□□ -0.19
ITGA6-210ENST00000475302 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
ITGA6-210ENST00000475302 LMTK2Q8IWU2 1503 aa13.89□□□□□ -0.19
ITGA6-210ENST00000475302 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
ITGA6-210ENST00000475302 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
ITGA6-210ENST00000475302 PTPRTO14522 1441 aa13.88□□□□□ -0.19
ITGA6-210ENST00000475302 E9PCH4 1651 aa13.88□□□□□ -0.19
ITGA6-210ENST00000475302 COL17A1Q9UMD9 1497 aaPredicted RBP13.87□□□□□ -0.19
ITGA6-210ENST00000475302 TET3O43151 1660 aa13.87□□□□□ -0.19
ITGA6-210ENST00000475302 KIF3BO15066 747 aa13.86□□□□□ -0.19
ITGA6-210ENST00000475302 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
ITGA6-210ENST00000475302 YEATS2Q9ULM3 1422 aa13.86□□□□□ -0.19
ITGA6-210ENST00000475302 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
ITGA6-210ENST00000475302 ATN1P54259 1190 aaPredicted RBP13.85□□□□□ -0.19
ITGA6-210ENST00000475302 TIE1P35590 1138 aa13.84□□□□□ -0.19
ITGA6-210ENST00000475302 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
ITGA6-210ENST00000475302 TTLL13PA6NNM8 815 aa13.83□□□□□ -0.2
ITGA6-210ENST00000475302 REREQ9P2R6 1566 aa13.83□□□□□ -0.2
ITGA6-210ENST00000475302 TRPM2O94759 1503 aa13.82□□□□□ -0.2
ITGA6-210ENST00000475302 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
ITGA6-210ENST00000475302 SPATA31E1Q6ZUB1 1445 aa13.81□□□□□ -0.2
ITGA6-210ENST00000475302 EFCAB6Q5THR3 1501 aa13.81□□□□□ -0.2
ITGA6-210ENST00000475302 KANK1Q14678 1352 aa13.81□□□□□ -0.2
ITGA6-210ENST00000475302 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
ITGA6-210ENST00000475302 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
ITGA6-210ENST00000475302 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
ITGA6-210ENST00000475302 ABCC3O15438 1527 aa13.79□□□□□ -0.2
ITGA6-210ENST00000475302 AGLP35573 1532 aa13.79□□□□□ -0.2
ITGA6-210ENST00000475302 NEURL4Q96JN8 1562 aa13.79□□□□□ -0.2
ITGA6-210ENST00000475302 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
ITGA6-210ENST00000475302 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
ITGA6-210ENST00000475302 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
ITGA6-210ENST00000475302 CEP152O94986 1710 aa13.77□□□□□ -0.21
ITGA6-210ENST00000475302 CLTCL1P53675 1640 aa13.76□□□□□ -0.21
ITGA6-210ENST00000475302 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
ITGA6-210ENST00000475302 NPATQ14207 1427 aa13.75□□□□□ -0.21
ITGA6-210ENST00000475302 ARHGAP31Q2M1Z3 1444 aa13.75□□□□□ -0.21
ITGA6-210ENST00000475302 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
ITGA6-210ENST00000475302 NOS1P29475 1434 aa13.73□□□□□ -0.21
ITGA6-210ENST00000475302 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
ITGA6-210ENST00000475302 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
ITGA6-210ENST00000475302 ARHGEF40Q8TER5 1519 aa13.73□□□□□ -0.21
ITGA6-210ENST00000475302 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
ITGA6-210ENST00000475302 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
ITGA6-210ENST00000475302 CAMSAP1Q5T5Y3 1602 aa13.72□□□□□ -0.21
ITGA6-210ENST00000475302 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
ITGA6-210ENST00000475302 GGT6Q6P531 493 aa13.71□□□□□ -0.21
ITGA6-210ENST00000475302 DCAF11Q8TEB1 546 aa13.71□□□□□ -0.21
ITGA6-210ENST00000475302 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
ITGA6-210ENST00000475302 PSEN1P49768 467 aa13.7□□□□□ -0.22
ITGA6-210ENST00000475302 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
ITGA6-210ENST00000475302 HIRIP3Q9BW71 556 aaPredicted RBP13.7□□□□□ -0.22
ITGA6-210ENST00000475302 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
ITGA6-210ENST00000475302 UGGT1Q9NYU2 1555 aa13.7□□□□□ -0.22
ITGA6-210ENST00000475302 WASHC2CQ9Y4E1 1318 aa13.69□□□□□ -0.22
ITGA6-210ENST00000475302 TRPM1Q7Z4N2 1603 aa13.69□□□□□ -0.22
ITGA6-210ENST00000475302 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
ITGA6-210ENST00000475302 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
ITGA6-210ENST00000475302 PIK3C2BO00750 1634 aa13.68□□□□□ -0.22
ITGA6-210ENST00000475302 ECM2O94769 699 aaPredicted RBP13.68□□□□□ -0.22
ITGA6-210ENST00000475302 STAC3Q96MF2 364 aa13.68□□□□□ -0.22
ITGA6-210ENST00000475302 C7P10643 843 aa13.67□□□□□ -0.22
ITGA6-210ENST00000475302 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
ITGA6-210ENST00000475302 LHX8Q68G74 356 aa13.67□□□□□ -0.22
ITGA6-210ENST00000475302 SYNMO15061 1565 aa13.66□□□□□ -0.22
ITGA6-210ENST00000475302 ADGRB3O60242 1522 aa13.66□□□□□ -0.22
ITGA6-210ENST00000475302 C11orf95C9JLR9 678 aaPredicted RBP13.66□□□□□ -0.22
ITGA6-210ENST00000475302 RGL3Q3MIN7 710 aa13.66□□□□□ -0.22
ITGA6-210ENST00000475302 LAMC1P11047 1609 aa13.65□□□□□ -0.22
ITGA6-210ENST00000475302 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
ITGA6-210ENST00000475302 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
ITGA6-210ENST00000475302 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
ITGA6-210ENST00000475302 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
ITGA6-210ENST00000475302 MROH2AA6NES4 1674 aa13.64□□□□□ -0.23
ITGA6-210ENST00000475302 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms