RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 NOS1P29475 1434 aa27.36■■□□□ 1.97
CACFD1-204ENST00000474734 TMEM2Q9UHN6 1383 aa27.35■■□□□ 1.97
CACFD1-204ENST00000474734 EFCAB6Q5THR3 1501 aa27.34■■□□□ 1.97
CACFD1-204ENST00000474734 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
CACFD1-204ENST00000474734 TET3O43151 1660 aa27.3■■□□□ 1.96
CACFD1-204ENST00000474734 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
CACFD1-204ENST00000474734 KDM5AP29375 1690 aaKnown RBP27.26■■□□□ 1.95
CACFD1-204ENST00000474734 MPHOSPH9Q99550 1183 aa27.25■■□□□ 1.95
CACFD1-204ENST00000474734 SLC26A8Q96RN1 970 aa27.23■■□□□ 1.95
CACFD1-204ENST00000474734 RPRD2Q5VT52 1461 aaKnown RBP27.23■■□□□ 1.95
CACFD1-204ENST00000474734 XIRP1Q702N8 1843 aaKnown RBP27.23■■□□□ 1.95
CACFD1-204ENST00000474734 SLC52A1Q9NWF4 448 aa27.22■■□□□ 1.95
CACFD1-204ENST00000474734 ADGRB3O60242 1522 aa27.21■■□□□ 1.95
CACFD1-204ENST00000474734 KCNA6P17658 529 aa27.2■■□□□ 1.94
CACFD1-204ENST00000474734 BCANQ96GW7 911 aa27.2■■□□□ 1.94
CACFD1-204ENST00000474734 TMEM94Q12767 1356 aa27.19■■□□□ 1.94
CACFD1-204ENST00000474734 PROSER2Q86WR7 435 aaPredicted RBP27.18■■□□□ 1.94
CACFD1-204ENST00000474734 E9PCH4 1651 aa27.17■■□□□ 1.94
CACFD1-204ENST00000474734 DHX57Q6P158 1386 aaKnown RBP27.16■■□□□ 1.94
CACFD1-204ENST00000474734 RBM33Q96EV2 1170 aaKnown RBP27.15■■□□□ 1.94
CACFD1-204ENST00000474734 ZFYVE9O95405 1425 aa27.12■■□□□ 1.93
CACFD1-204ENST00000474734 FAM135BQ49AJ0 1406 aa27.12■■□□□ 1.93
CACFD1-204ENST00000474734 PPP1R15AO75807 674 aaPredicted RBP27.09■■□□□ 1.93
CACFD1-204ENST00000474734 HDGFP51858 240 aaKnown RBP27.08■■□□□ 1.93
CACFD1-204ENST00000474734 SPHKAPQ2M3C7 1700 aa27.07■■□□□ 1.92
CACFD1-204ENST00000474734 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
CACFD1-204ENST00000474734 NKTRP30414 1462 aaKnown RBP27.06■■□□□ 1.92
CACFD1-204ENST00000474734 TMEM131LA2VDJ0 1609 aa27.05■■□□□ 1.92
CACFD1-204ENST00000474734 CHGAP10645 457 aaKnown RBP27.05■■□□□ 1.92
CACFD1-204ENST00000474734 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
CACFD1-204ENST00000474734 MYO5BQ9ULV0 1848 aa27.04■■□□□ 1.92
CACFD1-204ENST00000474734 FOXD1Q16676 465 aa27.04■■□□□ 1.92
CACFD1-204ENST00000474734 PLEKHG1Q9ULL1 1385 aa27.04■■□□□ 1.92
CACFD1-204ENST00000474734 TRPM2O94759 1503 aa27.04■■□□□ 1.92
CACFD1-204ENST00000474734 MSH6P52701 1360 aa27.03■■□□□ 1.92
CACFD1-204ENST00000474734 ROBO1Q9Y6N7 1651 aa27.02■■□□□ 1.92
CACFD1-204ENST00000474734 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
CACFD1-204ENST00000474734 RGS17Q9UGC6 210 aaPredicted RBP27.02■■□□□ 1.92
CACFD1-204ENST00000474734 ANKRD30BQ9BXX2 1392 aa27.01■■□□□ 1.91
CACFD1-204ENST00000474734 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
CACFD1-204ENST00000474734 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.99■■□□□ 1.91
CACFD1-204ENST00000474734 CCER1Q8TC90 406 aaPredicted RBP26.99■■□□□ 1.91
CACFD1-204ENST00000474734 SLAIN2Q9P270 581 aa26.98■■□□□ 1.91
CACFD1-204ENST00000474734 TBX22Q9Y458 520 aa26.97■■□□□ 1.91
CACFD1-204ENST00000474734 CCDC144AA2RUR9 1427 aa26.97■■□□□ 1.91
CACFD1-204ENST00000474734 CHD2O14647 1828 aaKnown RBP26.96■■□□□ 1.91
CACFD1-204ENST00000474734 ADAMTS13Q76LX8 1427 aa26.95■■□□□ 1.9
CACFD1-204ENST00000474734 C14orf37Q86TY3 774 aa26.93■■□□□ 1.9
CACFD1-204ENST00000474734 CLTCL1P53675 1640 aa26.91■■□□□ 1.9
CACFD1-204ENST00000474734 PHLPP1O60346 1717 aa26.87■■□□□ 1.89
CACFD1-204ENST00000474734 POTEAQ6S8J7 498 aa26.87■■□□□ 1.89
CACFD1-204ENST00000474734 NCOA3Q9Y6Q9 1424 aa26.86■■□□□ 1.89
CACFD1-204ENST00000474734 KIF1BO60333 1816 aa26.86■■□□□ 1.89
CACFD1-204ENST00000474734 PIK3R4Q99570 1358 aa26.84■■□□□ 1.89
CACFD1-204ENST00000474734 DIP2AQ14689 1571 aa26.84■■□□□ 1.89
CACFD1-204ENST00000474734 JCADQ9P266 1359 aa26.84■■□□□ 1.89
CACFD1-204ENST00000474734 PTPRUQ92729 1446 aa26.82■■□□□ 1.88
CACFD1-204ENST00000474734 ATF3P18847 181 aa26.82■■□□□ 1.88
CACFD1-204ENST00000474734 CADPS2Q86UW7 1296 aa26.82■■□□□ 1.88
CACFD1-204ENST00000474734 C19orf44Q9H6X5 657 aa26.82■■□□□ 1.88
CACFD1-204ENST00000474734 AMOTL2Q9Y2J4 779 aa26.8■■□□□ 1.88
CACFD1-204ENST00000474734 SIN3AQ96ST3 1273 aa26.79■■□□□ 1.88
CACFD1-204ENST00000474734 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.78■■□□□ 1.88
CACFD1-204ENST00000474734 SPATA31E1Q6ZUB1 1445 aa26.77■■□□□ 1.88
CACFD1-204ENST00000474734 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
CACFD1-204ENST00000474734 COL16A1Q07092 1604 aaPredicted RBP26.76■■□□□ 1.87
CACFD1-204ENST00000474734 NEUROD1Q13562 356 aa26.76■■□□□ 1.87
CACFD1-204ENST00000474734 NRXN3Q9Y4C0 1643 aa26.76■■□□□ 1.87
CACFD1-204ENST00000474734 METP08581 1390 aa26.72■■□□□ 1.87
CACFD1-204ENST00000474734 SETBP1Q9Y6X0 1596 aa26.72■■□□□ 1.87
CACFD1-204ENST00000474734 NEXMIFQ5QGS0 1516 aa26.7■■□□□ 1.87
CACFD1-204ENST00000474734 SPATA31A6Q5VVP1 1343 aa26.7■■□□□ 1.87
CACFD1-204ENST00000474734 RPGRIP1LQ68CZ1 1315 aa26.7■■□□□ 1.87
CACFD1-204ENST00000474734 MEX3CQ5U5Q3 659 aaKnown RBP26.7■■□□□ 1.86
CACFD1-204ENST00000474734 TONSLQ96HA7 1378 aa26.7■■□□□ 1.86
CACFD1-204ENST00000474734 AHDC1Q5TGY3 1603 aaPredicted RBP26.68■■□□□ 1.86
CACFD1-204ENST00000474734 RGL3Q3MIN7 710 aa26.68■■□□□ 1.86
CACFD1-204ENST00000474734 TIMELESSQ9UNS1 1208 aa26.68■■□□□ 1.86
CACFD1-204ENST00000474734 BRINP3Q76B58 766 aa26.67■■□□□ 1.86
CACFD1-204ENST00000474734 LRP6O75581 1613 aa26.65■■□□□ 1.86
CACFD1-204ENST00000474734 STAC3Q96MF2 364 aa26.65■■□□□ 1.86
CACFD1-204ENST00000474734 DCCP43146 1447 aa26.65■■□□□ 1.86
CACFD1-204ENST00000474734 XRN1Q8IZH2 1706 aaKnown RBP26.64■■□□□ 1.85
CACFD1-204ENST00000474734 PPLO60437 1756 aa26.61■■□□□ 1.85
CACFD1-204ENST00000474734 SHPRHQ149N8 1683 aa26.61■■□□□ 1.85
CACFD1-204ENST00000474734 ZNF772Q68DY9 489 aaPredicted RBP26.61■■□□□ 1.85
CACFD1-204ENST00000474734 IFT172Q9UG01 1749 aa26.61■■□□□ 1.85
CACFD1-204ENST00000474734 NUTM2BA6NNL0 878 aaPredicted RBP26.6■■□□□ 1.85
CACFD1-204ENST00000474734 NUTM2EB1AL46 878 aaPredicted RBP26.6■■□□□ 1.85
CACFD1-204ENST00000474734 NUTM2AQ8IVF1 878 aaPredicted RBP26.6■■□□□ 1.85
CACFD1-204ENST00000474734 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
CACFD1-204ENST00000474734 SETD1AO15047 1707 aaKnown RBP26.59■■□□□ 1.85
CACFD1-204ENST00000474734 MYOM2P54296 1465 aa26.59■■□□□ 1.85
CACFD1-204ENST00000474734 VGFO15240 615 aaPredicted RBP26.58■■□□□ 1.85
CACFD1-204ENST00000474734 ASXL1Q8IXJ9 1541 aa26.58■■□□□ 1.85
CACFD1-204ENST00000474734 MST1RQ04912 1400 aa26.57■■□□□ 1.84
CACFD1-204ENST00000474734 DCAF11Q8TEB1 546 aa26.57■■□□□ 1.84
CACFD1-204ENST00000474734 ADGRL3Q9HAR2 1447 aa26.54■■□□□ 1.84
CACFD1-204ENST00000474734 LRRC59Q96AG4 307 aaKnown RBP26.52■■□□□ 1.84
CACFD1-204ENST00000474734 KDM2AQ9Y2K7 1162 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms