RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 TET3O43151 1660 aa18.54■□□□□ 0.56
RPGR-206ENST00000474584 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
RPGR-206ENST00000474584 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
RPGR-206ENST00000474584 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
RPGR-206ENST00000474584 ASXL1Q8IXJ9 1541 aa18.53■□□□□ 0.56
RPGR-206ENST00000474584 MYOM1P52179 1685 aa18.53■□□□□ 0.56
RPGR-206ENST00000474584 RTEL1-TNFRSF6BF6WH68 1400 aa18.53■□□□□ 0.56
RPGR-206ENST00000474584 PPP2R1AP30153 589 aa18.53■□□□□ 0.56
RPGR-206ENST00000474584 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.56
RPGR-206ENST00000474584 SPAG9O60271 1321 aaKnown RBP18.52■□□□□ 0.56
RPGR-206ENST00000474584 ARAP3Q8WWN8 1544 aa18.52■□□□□ 0.56
RPGR-206ENST00000474584 EIF3AQ14152 1382 aaKnown RBP18.52■□□□□ 0.56
RPGR-206ENST00000474584 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.56
RPGR-206ENST00000474584 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.55
RPGR-206ENST00000474584 PTPRTO14522 1441 aa18.51■□□□□ 0.55
RPGR-206ENST00000474584 AMER1Q5JTC6 1135 aaPredicted RBP18.51■□□□□ 0.55
RPGR-206ENST00000474584 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
RPGR-206ENST00000474584 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
RPGR-206ENST00000474584 NPC1L1Q9UHC9 1359 aa18.47■□□□□ 0.55
RPGR-206ENST00000474584 NEURL4Q96JN8 1562 aa18.47■□□□□ 0.55
RPGR-206ENST00000474584 KANK1Q14678 1352 aa18.46■□□□□ 0.55
RPGR-206ENST00000474584 DUSP27Q5VZP5 1158 aa18.46■□□□□ 0.55
RPGR-206ENST00000474584 GOLGA2Q08379 1002 aa18.46■□□□□ 0.54
RPGR-206ENST00000474584 ZNF521Q96K83 1311 aa18.45■□□□□ 0.54
RPGR-206ENST00000474584 INO80Q9ULG1 1556 aaPredicted RBP18.45■□□□□ 0.54
RPGR-206ENST00000474584 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.45■□□□□ 0.54
RPGR-206ENST00000474584 ATP7AQ04656 1500 aa18.45■□□□□ 0.54
RPGR-206ENST00000474584 VWDEQ8N2E2 1590 aa18.44■□□□□ 0.54
RPGR-206ENST00000474584 C20orf194Q5TEA3 1177 aa18.44■□□□□ 0.54
RPGR-206ENST00000474584 AFAP1Q8N556 730 aa18.43■□□□□ 0.54
RPGR-206ENST00000474584 SLC24A1O60721 1099 aa18.43■□□□□ 0.54
RPGR-206ENST00000474584 CENPQQ7L2Z9 268 aaPredicted RBP18.43■□□□□ 0.54
RPGR-206ENST00000474584 KIF1BO60333 1816 aa18.43■□□□□ 0.54
RPGR-206ENST00000474584 MAP3K4Q9Y6R4 1608 aa18.42■□□□□ 0.54
RPGR-206ENST00000474584 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
RPGR-206ENST00000474584 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
RPGR-206ENST00000474584 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
RPGR-206ENST00000474584 MYOM2P54296 1465 aa18.4■□□□□ 0.54
RPGR-206ENST00000474584 ABCA6Q8N139 1617 aa18.4■□□□□ 0.54
RPGR-206ENST00000474584 USP35Q9P2H5 1018 aa18.39■□□□□ 0.53
RPGR-206ENST00000474584 IFT172Q9UG01 1749 aa18.39■□□□□ 0.53
RPGR-206ENST00000474584 SLFN5Q08AF3 891 aa18.38■□□□□ 0.53
RPGR-206ENST00000474584 FANCAO15360 1455 aa18.38■□□□□ 0.53
RPGR-206ENST00000474584 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
RPGR-206ENST00000474584 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
RPGR-206ENST00000474584 NKTRP30414 1462 aaKnown RBP18.37■□□□□ 0.53
RPGR-206ENST00000474584 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
RPGR-206ENST00000474584 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
RPGR-206ENST00000474584 MROH1Q8NDA8 1641 aa18.35■□□□□ 0.53
RPGR-206ENST00000474584 MYO3AQ8NEV4 1616 aa18.35■□□□□ 0.53
RPGR-206ENST00000474584 KIF3BO15066 747 aa18.35■□□□□ 0.53
RPGR-206ENST00000474584 NEFMP07197 916 aa18.35■□□□□ 0.53
RPGR-206ENST00000474584 CCDC146Q8IYE0 955 aa18.35■□□□□ 0.53
RPGR-206ENST00000474584 EFCAB6Q5THR3 1501 aa18.34■□□□□ 0.53
RPGR-206ENST00000474584 TRMT2AQ8IZ69 625 aaKnown RBP18.34■□□□□ 0.53
RPGR-206ENST00000474584 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
RPGR-206ENST00000474584 NGEFQ8N5V2 710 aa18.34■□□□□ 0.53
RPGR-206ENST00000474584 MROH2AA6NES4 1674 aa18.33■□□□□ 0.52
RPGR-206ENST00000474584 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
RPGR-206ENST00000474584 APAF1O14727 1248 aa18.32■□□□□ 0.52
RPGR-206ENST00000474584 CFAP70Q5T0N1 1121 aa18.32■□□□□ 0.52
RPGR-206ENST00000474584 E9PSI1 815 aa18.32■□□□□ 0.52
RPGR-206ENST00000474584 FAM161AQ3B820 660 aa18.31■□□□□ 0.52
RPGR-206ENST00000474584 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
RPGR-206ENST00000474584 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
RPGR-206ENST00000474584 ADGRF5Q8IZF2 1346 aa18.29■□□□□ 0.52
RPGR-206ENST00000474584 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
RPGR-206ENST00000474584 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
RPGR-206ENST00000474584 NRXN1Q9ULB1 1477 aa18.28■□□□□ 0.52
RPGR-206ENST00000474584 DAXXQ9UER7 740 aaPredicted RBP18.28■□□□□ 0.52
RPGR-206ENST00000474584 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
RPGR-206ENST00000474584 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
RPGR-206ENST00000474584 POLR3AO14802 1390 aaPredicted RBP18.26■□□□□ 0.51
RPGR-206ENST00000474584 NINLQ9Y2I6 1382 aa18.26■□□□□ 0.51
RPGR-206ENST00000474584 KIDINS220Q9ULH0 1771 aa18.26■□□□□ 0.51
RPGR-206ENST00000474584 C8orf34Q49A92 452 aa18.26■□□□□ 0.51
RPGR-206ENST00000474584 ZC3H13Q5T200 1668 aaKnown RBP18.26■□□□□ 0.51
RPGR-206ENST00000474584 ADGRB3O60242 1522 aa18.26■□□□□ 0.51
RPGR-206ENST00000474584 LMTK2Q8IWU2 1503 aa18.26■□□□□ 0.51
RPGR-206ENST00000474584 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
RPGR-206ENST00000474584 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
RPGR-206ENST00000474584 BCAR3O75815 825 aa18.24■□□□□ 0.51
RPGR-206ENST00000474584 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
RPGR-206ENST00000474584 CENPJQ9HC77 1338 aaPredicted RBP18.23■□□□□ 0.51
RPGR-206ENST00000474584 PPLO60437 1756 aa18.23■□□□□ 0.51
RPGR-206ENST00000474584 RGS3P49796 1198 aa18.23■□□□□ 0.51
RPGR-206ENST00000474584 NOS1P29475 1434 aa18.22■□□□□ 0.51
RPGR-206ENST00000474584 PDE3AQ14432 1141 aa18.21■□□□□ 0.51
RPGR-206ENST00000474584 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
RPGR-206ENST00000474584 ZNF518AQ6AHZ1 1483 aa18.21■□□□□ 0.5
RPGR-206ENST00000474584 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
RPGR-206ENST00000474584 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
RPGR-206ENST00000474584 WWC1Q8IX03 1113 aa18.19■□□□□ 0.5
RPGR-206ENST00000474584 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
RPGR-206ENST00000474584 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
RPGR-206ENST00000474584 CFAP65Q6ZU64 1925 aaKnown RBP18.18■□□□□ 0.5
RPGR-206ENST00000474584 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
RPGR-206ENST00000474584 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
RPGR-206ENST00000474584 SLC4A3P48751 1232 aa18.16■□□□□ 0.5
RPGR-206ENST00000474584 CLUAP1Q96AJ1 413 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms