RNA–Protein interactions for RNA: ENST00000474137.1

BBX-224, Transcript of BBX, HMG-box containing, humanhuman

TSL 2

Gene BBX, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-224ENST00000474137 ARID4BQ4LE39 1312 aaPredicted RBP13.42□□□□□ -0.26
BBX-224ENST00000474137 KDM5CP41229 1560 aa13.42□□□□□ -0.26
BBX-224ENST00000474137 GSE1Q14687 1217 aa13.42□□□□□ -0.26
BBX-224ENST00000474137 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
BBX-224ENST00000474137 MYOM3Q5VTT5 1437 aa13.4□□□□□ -0.26
BBX-224ENST00000474137 YEATS2Q9ULM3 1422 aa13.39□□□□□ -0.27
BBX-224ENST00000474137 KIAA1107Q9UPP5 1409 aa13.39□□□□□ -0.27
BBX-224ENST00000474137 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
BBX-224ENST00000474137 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
BBX-224ENST00000474137 AFAP1Q8N556 730 aa13.39□□□□□ -0.27
BBX-224ENST00000474137 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
BBX-224ENST00000474137 C9orf84Q5VXU9 1444 aa13.38□□□□□ -0.27
BBX-224ENST00000474137 CCDC141Q6ZP82 1450 aa13.37□□□□□ -0.27
BBX-224ENST00000474137 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
BBX-224ENST00000474137 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
BBX-224ENST00000474137 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
BBX-224ENST00000474137 ABCA6Q8N139 1617 aa13.36□□□□□ -0.27
BBX-224ENST00000474137 ATP7AQ04656 1500 aa13.36□□□□□ -0.27
BBX-224ENST00000474137 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
BBX-224ENST00000474137 DIP2CQ9Y2E4 1556 aa13.36□□□□□ -0.27
BBX-224ENST00000474137 ZNF644Q9H582 1327 aaPredicted RBP13.36□□□□□ -0.27
BBX-224ENST00000474137 ATP10AO60312 1499 aa13.36□□□□□ -0.27
BBX-224ENST00000474137 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
BBX-224ENST00000474137 INO80Q9ULG1 1556 aaPredicted RBP13.34□□□□□ -0.27
BBX-224ENST00000474137 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
BBX-224ENST00000474137 PTPN23Q9H3S7 1636 aa13.34□□□□□ -0.27
BBX-224ENST00000474137 KIDINS220Q9ULH0 1771 aa13.33□□□□□ -0.28
BBX-224ENST00000474137 BCORL1Q5H9F3 1711 aa13.33□□□□□ -0.28
BBX-224ENST00000474137 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
BBX-224ENST00000474137 FGD6Q6ZV73 1430 aa13.32□□□□□ -0.28
BBX-224ENST00000474137 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
BBX-224ENST00000474137 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
BBX-224ENST00000474137 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
BBX-224ENST00000474137 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
BBX-224ENST00000474137 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
BBX-224ENST00000474137 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
BBX-224ENST00000474137 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
BBX-224ENST00000474137 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
BBX-224ENST00000474137 MLECQ14165 292 aa13.3□□□□□ -0.28
BBX-224ENST00000474137 ADGBQ8N7X0 1667 aa13.29□□□□□ -0.28
BBX-224ENST00000474137 MADDQ8WXG6 1647 aa13.28□□□□□ -0.28
BBX-224ENST00000474137 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
BBX-224ENST00000474137 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
BBX-224ENST00000474137 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
BBX-224ENST00000474137 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
BBX-224ENST00000474137 SIGLEC1Q9BZZ2 1709 aa13.27□□□□□ -0.28
BBX-224ENST00000474137 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
BBX-224ENST00000474137 PLA2G2EQ9NZK7 142 aa13.27□□□□□ -0.29
BBX-224ENST00000474137 A2MP01023 1474 aa13.27□□□□□ -0.29
BBX-224ENST00000474137 CROCC2H7BZ55 1655 aa13.27□□□□□ -0.29
BBX-224ENST00000474137 ADAMTSL3P82987 1691 aa13.27□□□□□ -0.29
BBX-224ENST00000474137 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.29
BBX-224ENST00000474137 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
BBX-224ENST00000474137 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
BBX-224ENST00000474137 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
BBX-224ENST00000474137 AGLP35573 1532 aa13.25□□□□□ -0.29
BBX-224ENST00000474137 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
BBX-224ENST00000474137 GPR153Q6NV75 609 aa13.24□□□□□ -0.29
BBX-224ENST00000474137 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
BBX-224ENST00000474137 DAPK1P53355 1430 aa13.23□□□□□ -0.29
BBX-224ENST00000474137 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
BBX-224ENST00000474137 PTPRMP28827 1452 aa13.22□□□□□ -0.29
BBX-224ENST00000474137 ABCC5O15440 1437 aa13.2□□□□□ -0.3
BBX-224ENST00000474137 LSM11P83369 360 aaKnown RBP eCLIP13.19□□□□□ -0.3
BBX-224ENST00000474137 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
BBX-224ENST00000474137 KIF15Q9NS87 1388 aa13.19□□□□□ -0.3
BBX-224ENST00000474137 GGT6Q6P531 493 aa13.18□□□□□ -0.3
BBX-224ENST00000474137 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
BBX-224ENST00000474137 CNTLNQ9NXG0 1405 aa13.18□□□□□ -0.3
BBX-224ENST00000474137 ANKRD30AQ9BXX3 1397 aa13.18□□□□□ -0.3
BBX-224ENST00000474137 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
BBX-224ENST00000474137 KIF3BO15066 747 aa13.17□□□□□ -0.3
BBX-224ENST00000474137 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
BBX-224ENST00000474137 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
BBX-224ENST00000474137 ITGAEP38570 1179 aa13.16□□□□□ -0.3
BBX-224ENST00000474137 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
BBX-224ENST00000474137 CLTCQ00610 1675 aaKnown RBP13.15□□□□□ -0.31
BBX-224ENST00000474137 ERBINQ96RT1 1412 aa13.14□□□□□ -0.31
BBX-224ENST00000474137 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
BBX-224ENST00000474137 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
BBX-224ENST00000474137 KDM5DQ9BY66 1539 aa13.13□□□□□ -0.31
BBX-224ENST00000474137 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
BBX-224ENST00000474137 ADGRL2O95490 1459 aa13.12□□□□□ -0.31
BBX-224ENST00000474137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
BBX-224ENST00000474137 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
BBX-224ENST00000474137 RNF17Q9BXT8 1623 aaKnown RBP13.12□□□□□ -0.31
BBX-224ENST00000474137 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
BBX-224ENST00000474137 C3P01024 1663 aa13.12□□□□□ -0.31
BBX-224ENST00000474137 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
BBX-224ENST00000474137 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
BBX-224ENST00000474137 ZC3H13Q5T200 1668 aaKnown RBP13.11□□□□□ -0.31
BBX-224ENST00000474137 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
BBX-224ENST00000474137 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
BBX-224ENST00000474137 WASHC2CQ9Y4E1 1318 aa13.1□□□□□ -0.31
BBX-224ENST00000474137 KANK1Q14678 1352 aa13.09□□□□□ -0.31
BBX-224ENST00000474137 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
BBX-224ENST00000474137 PREX1Q8TCU6 1659 aa13.08□□□□□ -0.31
BBX-224ENST00000474137 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.32
BBX-224ENST00000474137 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
BBX-224ENST00000474137 ANKRD50Q9ULJ7 1429 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms