RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
FN1-219ENST00000474036 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
FN1-219ENST00000474036 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
FN1-219ENST00000474036 TESPA1A2RU30 521 aaPredicted RBP10.54□□□□□ -0.72
FN1-219ENST00000474036 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
FN1-219ENST00000474036 TMEM134Q9H6X4 195 aa10.54□□□□□ -0.72
FN1-219ENST00000474036 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
FN1-219ENST00000474036 DNAJB2P25686 324 aa10.53□□□□□ -0.72
FN1-219ENST00000474036 FCHSD2O94868 740 aa10.52□□□□□ -0.73
FN1-219ENST00000474036 FECHP22830 423 aa10.52□□□□□ -0.73
FN1-219ENST00000474036 RBM46Q8TBY0 533 aaKnown RBP10.52□□□□□ -0.73
FN1-219ENST00000474036 GPR37O15354 613 aa10.5□□□□□ -0.73
FN1-219ENST00000474036 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
FN1-219ENST00000474036 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
FN1-219ENST00000474036 MYO15BQ96JP2 1530 aa10.49□□□□□ -0.73
FN1-219ENST00000474036 SLC10A3P09131 477 aa10.49□□□□□ -0.73
FN1-219ENST00000474036 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
FN1-219ENST00000474036 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.49□□□□□ -0.73
FN1-219ENST00000474036 LCE2BO14633 110 aa10.48□□□□□ -0.73
FN1-219ENST00000474036 ZPR1O75312 459 aa10.48□□□□□ -0.73
FN1-219ENST00000474036 TLL1O43897 1013 aa10.47□□□□□ -0.73
FN1-219ENST00000474036 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
FN1-219ENST00000474036 PCDHB3Q9Y5E6 796 aa10.47□□□□□ -0.73
FN1-219ENST00000474036 CUX2O14529 1486 aa10.47□□□□□ -0.73
FN1-219ENST00000474036 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
FN1-219ENST00000474036 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
FN1-219ENST00000474036 ERCC6Q03468 1493 aa10.44□□□□□ -0.74
FN1-219ENST00000474036 CFHP08603 1231 aa10.44□□□□□ -0.74
FN1-219ENST00000474036 METTL3Q86U44 580 aaKnown RBP10.44□□□□□ -0.74
FN1-219ENST00000474036 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
FN1-219ENST00000474036 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
FN1-219ENST00000474036 HIC1Q14526 733 aa10.43□□□□□ -0.74
FN1-219ENST00000474036 Q6ZNB5 142 aa10.43□□□□□ -0.74
FN1-219ENST00000474036 EMID1Q96A84 441 aaPredicted RBP10.43□□□□□ -0.74
FN1-219ENST00000474036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.42□□□□□ -0.74
FN1-219ENST00000474036 GFRA3O60609 400 aa10.42□□□□□ -0.74
FN1-219ENST00000474036 SLC4A3P48751 1232 aa10.42□□□□□ -0.74
FN1-219ENST00000474036 GNPATO15228 680 aa10.4□□□□□ -0.74
FN1-219ENST00000474036 OATP04181 439 aa10.4□□□□□ -0.74
FN1-219ENST00000474036 PHOX2BQ99453 314 aa10.4□□□□□ -0.74
FN1-219ENST00000474036 PRR14Q9BWN1 585 aa10.4□□□□□ -0.74
FN1-219ENST00000474036 RNF223E7ERA6 249 aa10.39□□□□□ -0.75
FN1-219ENST00000474036 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
FN1-219ENST00000474036 V9GY48 417 aaPredicted RBP10.39□□□□□ -0.75
FN1-219ENST00000474036 PUS10Q3MIT2 529 aaKnown RBP10.37□□□□□ -0.75
FN1-219ENST00000474036 KMT5BQ4FZB7 885 aa10.37□□□□□ -0.75
FN1-219ENST00000474036 S1PR4O95977 384 aa10.36□□□□□ -0.75
FN1-219ENST00000474036 SMYD5Q6GMV2 418 aa10.36□□□□□ -0.75
FN1-219ENST00000474036 TMUB1Q9BVT8 246 aa10.36□□□□□ -0.75
FN1-219ENST00000474036 GGCXP38435 758 aa10.34□□□□□ -0.75
FN1-219ENST00000474036 TRIM67Q6ZTA4 783 aa10.33□□□□□ -0.76
FN1-219ENST00000474036 NRG2O14511 850 aaPredicted RBP10.32□□□□□ -0.76
FN1-219ENST00000474036 LAPTM4AQ15012 233 aa10.32□□□□□ -0.76
FN1-219ENST00000474036 SCUBE3Q8IX30 993 aa10.32□□□□□ -0.76
FN1-219ENST00000474036 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
FN1-219ENST00000474036 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
FN1-219ENST00000474036 DAXXQ9UER7 740 aaPredicted RBP10.31□□□□□ -0.76
FN1-219ENST00000474036 PLA2G2CQ5R387 149 aa10.3□□□□□ -0.76
FN1-219ENST00000474036 TRAF7Q6Q0C0 670 aa10.3□□□□□ -0.76
FN1-219ENST00000474036 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
FN1-219ENST00000474036 DDX11L8A8MPP1 907 aa10.29□□□□□ -0.76
FN1-219ENST00000474036 ADH1BP00325 375 aa10.29□□□□□ -0.76
FN1-219ENST00000474036 SLC19A1P41440 591 aa10.29□□□□□ -0.76
FN1-219ENST00000474036 NR1I2O75469 434 aa10.28□□□□□ -0.76
FN1-219ENST00000474036 RDH13Q8NBN7 331 aa10.28□□□□□ -0.76
FN1-219ENST00000474036 ZCCHC6Q5VYS8 1495 aaKnown RBP10.28□□□□□ -0.76
FN1-219ENST00000474036 FUT2Q10981 343 aa10.27□□□□□ -0.77
FN1-219ENST00000474036 ANKLE1Q8NAG6 615 aa10.27□□□□□ -0.77
FN1-219ENST00000474036 MORN1Q5T089 497 aa10.26□□□□□ -0.77
FN1-219ENST00000474036 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
FN1-219ENST00000474036 SLC6A16Q9GZN6 736 aa10.25□□□□□ -0.77
FN1-219ENST00000474036 GCGRP47871 477 aa10.24□□□□□ -0.77
FN1-219ENST00000474036 THAP11Q96EK4 314 aa10.24□□□□□ -0.77
FN1-219ENST00000474036 SPSB2Q99619 263 aa10.24□□□□□ -0.77
FN1-219ENST00000474036 SLC27A5Q9Y2P5 690 aa10.23□□□□□ -0.77
FN1-219ENST00000474036 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
FN1-219ENST00000474036 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
FN1-219ENST00000474036 DCAF1Q9Y4B6 1507 aa10.22□□□□□ -0.77
FN1-219ENST00000474036 THOC2Q8NI27 1593 aaKnown RBP10.22□□□□□ -0.77
FN1-219ENST00000474036 ZNF598Q86UK7 904 aaKnown RBP10.21□□□□□ -0.77
FN1-219ENST00000474036 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
FN1-219ENST00000474036 NESP48681 1621 aa10.2□□□□□ -0.78
FN1-219ENST00000474036 PRDM9Q9NQV7 894 aa10.2□□□□□ -0.78
FN1-219ENST00000474036 KIF21AQ7Z4S6 1674 aa10.19□□□□□ -0.78
FN1-219ENST00000474036 SMARCA2P51531 1590 aa10.19□□□□□ -0.78
FN1-219ENST00000474036 ZNF697Q5TEC3 545 aa10.19□□□□□ -0.78
FN1-219ENST00000474036 TNFRSF10AO00220 468 aa10.18□□□□□ -0.78
FN1-219ENST00000474036 GDF9O60383 454 aa10.18□□□□□ -0.78
FN1-219ENST00000474036 MAP2K5Q13163 448 aa10.18□□□□□ -0.78
FN1-219ENST00000474036 RNF19BQ6ZMZ0 732 aa10.18□□□□□ -0.78
FN1-219ENST00000474036 IRF6O14896 467 aa10.17□□□□□ -0.78
FN1-219ENST00000474036 BRICD5Q6PL45 260 aa10.16□□□□□ -0.78
FN1-219ENST00000474036 SULF1Q8IWU6 871 aa10.16□□□□□ -0.78
FN1-219ENST00000474036 CD46P15529 392 aa10.15□□□□□ -0.78
FN1-219ENST00000474036 HLA-CQ95604 372 aa10.15□□□□□ -0.78
FN1-219ENST00000474036 FCF1Q9Y324 198 aaKnown RBP10.15□□□□□ -0.78
FN1-219ENST00000474036 PRR20EP86478 221 aa10.14□□□□□ -0.79
FN1-219ENST00000474036 PRR20CP86479 221 aa10.14□□□□□ -0.79
FN1-219ENST00000474036 PRR20DP86480 221 aa10.14□□□□□ -0.79
FN1-219ENST00000474036 PRR20BP86481 221 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms