RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 DIP2AQ14689 1571 aa17.02■□□□□ 0.31
SSBP1-209ENST00000473783 AFF2P51816 1311 aa17■□□□□ 0.31
SSBP1-209ENST00000473783 ADGRB3O60242 1522 aa16.99■□□□□ 0.31
SSBP1-209ENST00000473783 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.99■□□□□ 0.31
SSBP1-209ENST00000473783 ZRANB1Q9UGI0 708 aa16.98■□□□□ 0.31
SSBP1-209ENST00000473783 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
SSBP1-209ENST00000473783 IDI1Q13907 227 aa16.97■□□□□ 0.31
SSBP1-209ENST00000473783 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
SSBP1-209ENST00000473783 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
SSBP1-209ENST00000473783 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
SSBP1-209ENST00000473783 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
SSBP1-209ENST00000473783 ERBINQ96RT1 1412 aa16.96■□□□□ 0.3
SSBP1-209ENST00000473783 ATAD2Q6PL18 1390 aa16.95■□□□□ 0.3
SSBP1-209ENST00000473783 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
SSBP1-209ENST00000473783 BCANQ96GW7 911 aa16.95■□□□□ 0.3
SSBP1-209ENST00000473783 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
SSBP1-209ENST00000473783 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
SSBP1-209ENST00000473783 LMTK2Q8IWU2 1503 aa16.93■□□□□ 0.3
SSBP1-209ENST00000473783 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
SSBP1-209ENST00000473783 KANK1Q14678 1352 aa16.92■□□□□ 0.3
SSBP1-209ENST00000473783 ATF3P18847 181 aa16.92■□□□□ 0.3
SSBP1-209ENST00000473783 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
SSBP1-209ENST00000473783 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
SSBP1-209ENST00000473783 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
SSBP1-209ENST00000473783 NOS1P29475 1434 aa16.91■□□□□ 0.3
SSBP1-209ENST00000473783 NHSL1Q5SYE7 1610 aa16.91■□□□□ 0.3
SSBP1-209ENST00000473783 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
SSBP1-209ENST00000473783 ZFYVE9O95405 1425 aa16.9■□□□□ 0.3
SSBP1-209ENST00000473783 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
SSBP1-209ENST00000473783 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
SSBP1-209ENST00000473783 MYO5BQ9ULV0 1848 aa16.9■□□□□ 0.3
SSBP1-209ENST00000473783 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
SSBP1-209ENST00000473783 C8orf37Q96NL8 207 aa16.88■□□□□ 0.29
SSBP1-209ENST00000473783 SLC52A1Q9NWF4 448 aa16.88■□□□□ 0.29
SSBP1-209ENST00000473783 TBX22Q9Y458 520 aa16.88■□□□□ 0.29
SSBP1-209ENST00000473783 DCCP43146 1447 aa16.87■□□□□ 0.29
SSBP1-209ENST00000473783 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
SSBP1-209ENST00000473783 EP400Q96L91 3159 aa16.87■□□□□ 0.29
SSBP1-209ENST00000473783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
SSBP1-209ENST00000473783 CROCC2H7BZ55 1655 aa16.87■□□□□ 0.29
SSBP1-209ENST00000473783 PIK3R4Q99570 1358 aa16.86■□□□□ 0.29
SSBP1-209ENST00000473783 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
SSBP1-209ENST00000473783 PPP1R15AO75807 674 aaPredicted RBP16.85■□□□□ 0.29
SSBP1-209ENST00000473783 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
SSBP1-209ENST00000473783 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
SSBP1-209ENST00000473783 CCDC125Q86Z20 511 aa16.84■□□□□ 0.29
SSBP1-209ENST00000473783 RIMS2Q9UQ26 1411 aa16.84■□□□□ 0.29
SSBP1-209ENST00000473783 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
SSBP1-209ENST00000473783 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
SSBP1-209ENST00000473783 LRP5O75197 1615 aa16.81■□□□□ 0.28
SSBP1-209ENST00000473783 ADAMTS13Q76LX8 1427 aa16.81■□□□□ 0.28
SSBP1-209ENST00000473783 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
SSBP1-209ENST00000473783 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
SSBP1-209ENST00000473783 MST1RQ04912 1400 aa16.79■□□□□ 0.28
SSBP1-209ENST00000473783 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSBP1-209ENST00000473783 TRPM2O94759 1503 aa16.79■□□□□ 0.28
SSBP1-209ENST00000473783 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
SSBP1-209ENST00000473783 ABCC5O15440 1437 aa16.76■□□□□ 0.27
SSBP1-209ENST00000473783 USP21Q9UK80 565 aa16.75■□□□□ 0.27
SSBP1-209ENST00000473783 XRN1Q8IZH2 1706 aaKnown RBP16.74■□□□□ 0.27
SSBP1-209ENST00000473783 ATRNO75882 1429 aa16.74■□□□□ 0.27
SSBP1-209ENST00000473783 ADAMTS2O95450 1211 aa16.74■□□□□ 0.27
SSBP1-209ENST00000473783 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
SSBP1-209ENST00000473783 LAMC1P11047 1609 aa16.74■□□□□ 0.27
SSBP1-209ENST00000473783 PTCH1Q13635 1447 aa16.73■□□□□ 0.27
SSBP1-209ENST00000473783 PTPRUQ92729 1446 aa16.72■□□□□ 0.27
SSBP1-209ENST00000473783 FNBP4Q8N3X1 1017 aaPredicted RBP16.72■□□□□ 0.27
SSBP1-209ENST00000473783 UNC13BO14795 1591 aa16.71■□□□□ 0.27
SSBP1-209ENST00000473783 DAPK1P53355 1430 aa16.7■□□□□ 0.26
SSBP1-209ENST00000473783 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
SSBP1-209ENST00000473783 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-209ENST00000473783 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
SSBP1-209ENST00000473783 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
SSBP1-209ENST00000473783 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
SSBP1-209ENST00000473783 COL22A1Q8NFW1 1626 aaPredicted RBP16.67■□□□□ 0.26
SSBP1-209ENST00000473783 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
SSBP1-209ENST00000473783 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
SSBP1-209ENST00000473783 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
SSBP1-209ENST00000473783 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
SSBP1-209ENST00000473783 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
SSBP1-209ENST00000473783 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
SSBP1-209ENST00000473783 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-209ENST00000473783 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
SSBP1-209ENST00000473783 C1orf167Q5SNV9 1468 aa16.62■□□□□ 0.25
SSBP1-209ENST00000473783 KANK4Q5T7N3 995 aaPredicted RBP16.62■□□□□ 0.25
SSBP1-209ENST00000473783 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
SSBP1-209ENST00000473783 GJD4Q96KN9 370 aaPredicted RBP16.61■□□□□ 0.25
SSBP1-209ENST00000473783 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
SSBP1-209ENST00000473783 MYOM2P54296 1465 aa16.61■□□□□ 0.25
SSBP1-209ENST00000473783 ADGRL2O95490 1459 aa16.6■□□□□ 0.25
SSBP1-209ENST00000473783 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
SSBP1-209ENST00000473783 E9PCH4 1651 aa16.59■□□□□ 0.25
SSBP1-209ENST00000473783 SF3B2Q13435 895 aaKnown RBP16.59■□□□□ 0.25
SSBP1-209ENST00000473783 DEFB132Q7Z7B7 95 aa16.59■□□□□ 0.25
SSBP1-209ENST00000473783 CHIC2Q9UKJ5 165 aa16.59■□□□□ 0.25
SSBP1-209ENST00000473783 GLI3P10071 1580 aa16.57■□□□□ 0.24
SSBP1-209ENST00000473783 ANKRD50Q9ULJ7 1429 aa16.56■□□□□ 0.24
SSBP1-209ENST00000473783 RALGAPBQ86X10 1494 aa16.55■□□□□ 0.24
SSBP1-209ENST00000473783 METP08581 1390 aa16.55■□□□□ 0.24
SSBP1-209ENST00000473783 HRCP23327 699 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms