RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 SPIRE2Q8WWL2 714 aa12.37□□□□□ -0.43
SEC22A-204ENST00000473494 DDX11L8A8MPP1 907 aa12.36□□□□□ -0.43
SEC22A-204ENST00000473494 EMP3P54852 163 aa12.36□□□□□ -0.43
SEC22A-204ENST00000473494 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
SEC22A-204ENST00000473494 MCM6Q14566 821 aa12.35□□□□□ -0.43
SEC22A-204ENST00000473494 TUSC1Q2TAM9 212 aa12.35□□□□□ -0.43
SEC22A-204ENST00000473494 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
SEC22A-204ENST00000473494 LIMD1Q9UGP4 676 aa12.34□□□□□ -0.43
SEC22A-204ENST00000473494 GJA5P36382 358 aa12.32□□□□□ -0.44
SEC22A-204ENST00000473494 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
SEC22A-204ENST00000473494 SPTLC1O15269 473 aa12.31□□□□□ -0.44
SEC22A-204ENST00000473494 RSBN1LQ6PCB5 846 aaPredicted RBP12.31□□□□□ -0.44
SEC22A-204ENST00000473494 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
SEC22A-204ENST00000473494 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
SEC22A-204ENST00000473494 PPP2R2DQ66LE6 453 aa12.3□□□□□ -0.44
SEC22A-204ENST00000473494 RIC3Q7Z5B4 369 aa12.3□□□□□ -0.44
SEC22A-204ENST00000473494 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
SEC22A-204ENST00000473494 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
SEC22A-204ENST00000473494 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
SEC22A-204ENST00000473494 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
SEC22A-204ENST00000473494 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
SEC22A-204ENST00000473494 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
SEC22A-204ENST00000473494 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
SEC22A-204ENST00000473494 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
SEC22A-204ENST00000473494 RFC5P40937 340 aa12.27□□□□□ -0.45
SEC22A-204ENST00000473494 USP46P62068 366 aa12.27□□□□□ -0.45
SEC22A-204ENST00000473494 LAPTM4BQ86VI4 370 aa12.27□□□□□ -0.45
SEC22A-204ENST00000473494 FAM205CA6NFA0 338 aa12.26□□□□□ -0.45
SEC22A-204ENST00000473494 GCGRP47871 477 aa12.26□□□□□ -0.45
SEC22A-204ENST00000473494 FBXO31Q5XUX0 539 aaPredicted RBP12.26□□□□□ -0.45
SEC22A-204ENST00000473494 NBPF3Q9H094 633 aa12.26□□□□□ -0.45
SEC22A-204ENST00000473494 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
SEC22A-204ENST00000473494 A6NJR5 290 aa12.25□□□□□ -0.45
SEC22A-204ENST00000473494 TK2O00142 265 aa12.25□□□□□ -0.45
SEC22A-204ENST00000473494 KDM4AO75164 1064 aa12.25□□□□□ -0.45
SEC22A-204ENST00000473494 SLC10A3P09131 477 aa12.25□□□□□ -0.45
SEC22A-204ENST00000473494 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
SEC22A-204ENST00000473494 ARXQ96QS3 562 aa12.25□□□□□ -0.45
SEC22A-204ENST00000473494 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
SEC22A-204ENST00000473494 HOXA2O43364 376 aa12.24□□□□□ -0.45
SEC22A-204ENST00000473494 BANK1Q8NDB2 785 aa12.24□□□□□ -0.45
SEC22A-204ENST00000473494 BHMG1C9JSJ3 638 aaPredicted RBP12.23□□□□□ -0.45
SEC22A-204ENST00000473494 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
SEC22A-204ENST00000473494 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
SEC22A-204ENST00000473494 POTEB3A0JP26 581 aa12.21□□□□□ -0.45
SEC22A-204ENST00000473494 LILRB3O75022 631 aa12.21□□□□□ -0.45
SEC22A-204ENST00000473494 NDUFV2P19404 249 aa12.21□□□□□ -0.45
SEC22A-204ENST00000473494 TMEM259Q4ZIN3 620 aa12.21□□□□□ -0.45
SEC22A-204ENST00000473494 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
SEC22A-204ENST00000473494 SLF2Q8IX21 1173 aa12.21□□□□□ -0.45
SEC22A-204ENST00000473494 SOCS7O14512 581 aa12.2□□□□□ -0.46
SEC22A-204ENST00000473494 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
SEC22A-204ENST00000473494 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
SEC22A-204ENST00000473494 PRPF38BQ5VTL8 546 aaKnown RBP12.2□□□□□ -0.46
SEC22A-204ENST00000473494 QPCTQ16769 361 aa12.19□□□□□ -0.46
SEC22A-204ENST00000473494 SAMD7Q7Z3H4 446 aa12.19□□□□□ -0.46
SEC22A-204ENST00000473494 CLUAP1Q96AJ1 413 aa12.19□□□□□ -0.46
SEC22A-204ENST00000473494 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
SEC22A-204ENST00000473494 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
SEC22A-204ENST00000473494 FDX1P10109 184 aa12.16□□□□□ -0.46
SEC22A-204ENST00000473494 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.46
SEC22A-204ENST00000473494 CSPP1Q1MSJ5 1256 aa12.16□□□□□ -0.46
SEC22A-204ENST00000473494 ZFRQ96KR1 1074 aaKnown RBP12.16□□□□□ -0.46
SEC22A-204ENST00000473494 CFHP08603 1231 aa12.15□□□□□ -0.46
SEC22A-204ENST00000473494 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
SEC22A-204ENST00000473494 FAM163AQ96GL9 167 aaPredicted RBP12.15□□□□□ -0.46
SEC22A-204ENST00000473494 ZBTB3Q9H5J0 574 aa12.15□□□□□ -0.46
SEC22A-204ENST00000473494 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
SEC22A-204ENST00000473494 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
SEC22A-204ENST00000473494 SNRKQ9NRH2 765 aa12.14□□□□□ -0.47
SEC22A-204ENST00000473494 HRO43593 1189 aa12.13□□□□□ -0.47
SEC22A-204ENST00000473494 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
SEC22A-204ENST00000473494 MTMR14Q8NCE2 650 aa12.13□□□□□ -0.47
SEC22A-204ENST00000473494 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
SEC22A-204ENST00000473494 TRAK2O60296 914 aa12.12□□□□□ -0.47
SEC22A-204ENST00000473494 HRCP23327 699 aa12.12□□□□□ -0.47
SEC22A-204ENST00000473494 FUT2Q10981 343 aa12.12□□□□□ -0.47
SEC22A-204ENST00000473494 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
SEC22A-204ENST00000473494 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
SEC22A-204ENST00000473494 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
SEC22A-204ENST00000473494 HLA-CQ95604 372 aa12.12□□□□□ -0.47
SEC22A-204ENST00000473494 POM121Q96HA1 1249 aa12.12□□□□□ -0.47
SEC22A-204ENST00000473494 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
SEC22A-204ENST00000473494 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
SEC22A-204ENST00000473494 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
SEC22A-204ENST00000473494 RAD21O60216 631 aa12.1□□□□□ -0.47
SEC22A-204ENST00000473494 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
SEC22A-204ENST00000473494 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
SEC22A-204ENST00000473494 HOMEZQ8IX15 550 aa12.1□□□□□ -0.47
SEC22A-204ENST00000473494 RNF40O75150 1001 aa12.09□□□□□ -0.47
SEC22A-204ENST00000473494 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
SEC22A-204ENST00000473494 LRCH3Q96II8 777 aa12.09□□□□□ -0.47
SEC22A-204ENST00000473494 NUTM2BA6NNL0 878 aaPredicted RBP12.08□□□□□ -0.48
SEC22A-204ENST00000473494 NUTM2EB1AL46 878 aaPredicted RBP12.08□□□□□ -0.48
SEC22A-204ENST00000473494 NUTM2DQ5VT03 806 aaPredicted RBP12.08□□□□□ -0.48
SEC22A-204ENST00000473494 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
SEC22A-204ENST00000473494 APBB1O00213 710 aa12.07□□□□□ -0.48
SEC22A-204ENST00000473494 MTMR2Q13614 643 aa12.07□□□□□ -0.48
SEC22A-204ENST00000473494 AP1G2O75843 785 aa12.06□□□□□ -0.48
SEC22A-204ENST00000473494 ATP6V1AP38606 617 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms