RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
RGPD6-208ENST00000473101 BRPF1P55201 1214 aaPredicted RBP7.15□□□□□ -1.26
RGPD6-208ENST00000473101 ZNF516Q92618 1163 aa7.15□□□□□ -1.26
RGPD6-208ENST00000473101 IL21Q9HBE4 155 aa7.15□□□□□ -1.26
RGPD6-208ENST00000473101 FCHSD2O94868 740 aa7.14□□□□□ -1.27
RGPD6-208ENST00000473101 COPS2P61201 443 aa7.14□□□□□ -1.27
RGPD6-208ENST00000473101 Q6ZNB5 142 aa7.14□□□□□ -1.27
RGPD6-208ENST00000473101 RBM46Q8TBY0 533 aaKnown RBP7.14□□□□□ -1.27
RGPD6-208ENST00000473101 ADGRG1Q9Y653 693 aa7.14□□□□□ -1.27
RGPD6-208ENST00000473101 DNAJB2P25686 324 aa7.13□□□□□ -1.27
RGPD6-208ENST00000473101 RBM26Q5T8P6 1007 aaKnown RBP7.13□□□□□ -1.27
RGPD6-208ENST00000473101 NECTIN2Q92692 538 aa7.13□□□□□ -1.27
RGPD6-208ENST00000473101 NKX2-3Q8TAU0 364 aa7.12□□□□□ -1.27
RGPD6-208ENST00000473101 RCCD1A6NED2 376 aa7.11□□□□□ -1.27
RGPD6-208ENST00000473101 NEUROD2Q15784 382 aa7.11□□□□□ -1.27
RGPD6-208ENST00000473101 SLC24A3Q9HC58 644 aa7.11□□□□□ -1.27
RGPD6-208ENST00000473101 C14orf37Q86TY3 774 aa7.1□□□□□ -1.27
RGPD6-208ENST00000473101 TMEM134Q9H6X4 195 aa7.1□□□□□ -1.27
RGPD6-208ENST00000473101 ZMYND10O75800 440 aa7.09□□□□□ -1.27
RGPD6-208ENST00000473101 PPP1R18Q6NYC8 613 aa7.09□□□□□ -1.27
RGPD6-208ENST00000473101 PCDHB3Q9Y5E6 796 aa7.09□□□□□ -1.27
RGPD6-208ENST00000473101 PRR14Q9BWN1 585 aa7.08□□□□□ -1.28
RGPD6-208ENST00000473101 FECHP22830 423 aa7.07□□□□□ -1.28
RGPD6-208ENST00000473101 HIC1Q14526 733 aa7.07□□□□□ -1.28
RGPD6-208ENST00000473101 BLOC1S3Q6QNY0 202 aa7.07□□□□□ -1.28
RGPD6-208ENST00000473101 PRKD2Q9BZL6 878 aa7.07□□□□□ -1.28
RGPD6-208ENST00000473101 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.07□□□□□ -1.28
RGPD6-208ENST00000473101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.06□□□□□ -1.28
RGPD6-208ENST00000473101 ZPR1O75312 459 aa7.06□□□□□ -1.28
RGPD6-208ENST00000473101 CFHP08603 1231 aa7.06□□□□□ -1.28
RGPD6-208ENST00000473101 PXYLP1Q8TE99 480 aa7.06□□□□□ -1.28
RGPD6-208ENST00000473101 OATP04181 439 aa7.05□□□□□ -1.28
RGPD6-208ENST00000473101 KMT5BQ4FZB7 885 aa7.05□□□□□ -1.28
RGPD6-208ENST00000473101 BARGINQ6ZT62 677 aa7.05□□□□□ -1.28
RGPD6-208ENST00000473101 GNPATO15228 680 aa7.04□□□□□ -1.28
RGPD6-208ENST00000473101 TLL1O43897 1013 aa7.04□□□□□ -1.28
RGPD6-208ENST00000473101 SLC10A3P09131 477 aa7.04□□□□□ -1.28
RGPD6-208ENST00000473101 GGCXP38435 758 aa7.04□□□□□ -1.28
RGPD6-208ENST00000473101 METTL3Q86U44 580 aaKnown RBP7.04□□□□□ -1.28
RGPD6-208ENST00000473101 GPR37O15354 613 aa7.03□□□□□ -1.28
RGPD6-208ENST00000473101 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
RGPD6-208ENST00000473101 ACTN4O43707 911 aaKnown RBP7.02□□□□□ -1.29
RGPD6-208ENST00000473101 GPIHBP1Q8IV16 184 aa7.02□□□□□ -1.29
RGPD6-208ENST00000473101 KRI1Q8N9T8 703 aaKnown RBP7.02□□□□□ -1.29
RGPD6-208ENST00000473101 ARXQ96QS3 562 aa7.02□□□□□ -1.29
RGPD6-208ENST00000473101 DAXXQ9UER7 740 aaPredicted RBP7.02□□□□□ -1.29
RGPD6-208ENST00000473101 GFRA3O60609 400 aa7.01□□□□□ -1.29
RGPD6-208ENST00000473101 AK7Q96M32 723 aa7.01□□□□□ -1.29
RGPD6-208ENST00000473101 RDH13Q8NBN7 331 aa7□□□□□ -1.29
RGPD6-208ENST00000473101 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
RGPD6-208ENST00000473101 PUS10Q3MIT2 529 aaKnown RBP6.99□□□□□ -1.29
RGPD6-208ENST00000473101 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
RGPD6-208ENST00000473101 DDX11L8A8MPP1 907 aa6.98□□□□□ -1.29
RGPD6-208ENST00000473101 RNF223E7ERA6 249 aa6.98□□□□□ -1.29
RGPD6-208ENST00000473101 NR1I2O75469 434 aa6.98□□□□□ -1.29
RGPD6-208ENST00000473101 S1PR4O95977 384 aa6.98□□□□□ -1.29
RGPD6-208ENST00000473101 LAPTM4AQ15012 233 aa6.98□□□□□ -1.29
RGPD6-208ENST00000473101 TMUB1Q9BVT8 246 aa6.98□□□□□ -1.29
RGPD6-208ENST00000473101 PPEF1O14829 653 aaPredicted RBP6.96□□□□□ -1.3
RGPD6-208ENST00000473101 ADH1BP00325 375 aa6.96□□□□□ -1.3
RGPD6-208ENST00000473101 PHOX2BQ99453 314 aa6.96□□□□□ -1.3
RGPD6-208ENST00000473101 PDZRN3Q9UPQ7 1066 aa6.95□□□□□ -1.3
RGPD6-208ENST00000473101 NRG2O14511 850 aaPredicted RBP6.94□□□□□ -1.3
RGPD6-208ENST00000473101 SLC19A1P41440 591 aa6.94□□□□□ -1.3
RGPD6-208ENST00000473101 FUT2Q10981 343 aa6.94□□□□□ -1.3
RGPD6-208ENST00000473101 SCUBE3Q8IX30 993 aa6.94□□□□□ -1.3
RGPD6-208ENST00000473101 TRIM66O15016 1216 aa6.93□□□□□ -1.3
RGPD6-208ENST00000473101 EMID1Q96A84 441 aaPredicted RBP6.93□□□□□ -1.3
RGPD6-208ENST00000473101 SLC6A16Q9GZN6 736 aa6.93□□□□□ -1.3
RGPD6-208ENST00000473101 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
RGPD6-208ENST00000473101 TRAF7Q6Q0C0 670 aa6.92□□□□□ -1.3
RGPD6-208ENST00000473101 SULF1Q8IWU6 871 aa6.92□□□□□ -1.3
RGPD6-208ENST00000473101 ANKLE1Q8NAG6 615 aa6.92□□□□□ -1.3
RGPD6-208ENST00000473101 IL27Q8NEV9 243 aa6.92□□□□□ -1.3
RGPD6-208ENST00000473101 SPSB2Q99619 263 aa6.92□□□□□ -1.3
RGPD6-208ENST00000473101 KDM4CQ9H3R0 1056 aa6.92□□□□□ -1.3
RGPD6-208ENST00000473101 LCE2BO14633 110 aa6.91□□□□□ -1.3
RGPD6-208ENST00000473101 PDE4DQ08499 809 aa6.91□□□□□ -1.3
RGPD6-208ENST00000473101 MORN1Q5T089 497 aa6.91□□□□□ -1.3
RGPD6-208ENST00000473101 LIAT1Q6ZQX7 453 aa6.91□□□□□ -1.3
RGPD6-208ENST00000473101 ATP6V1AP38606 617 aa6.9□□□□□ -1.3
RGPD6-208ENST00000473101 GCGRP47871 477 aa6.9□□□□□ -1.3
RGPD6-208ENST00000473101 MAP2K5Q13163 448 aa6.9□□□□□ -1.3
RGPD6-208ENST00000473101 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
RGPD6-208ENST00000473101 PLA2G2CQ5R387 149 aa6.89□□□□□ -1.31
RGPD6-208ENST00000473101 SPRYD7Q5W111 196 aa6.89□□□□□ -1.31
RGPD6-208ENST00000473101 SLC27A5Q9Y2P5 690 aa6.89□□□□□ -1.31
RGPD6-208ENST00000473101 MINK1Q8N4C8 1332 aaPredicted RBP6.88□□□□□ -1.31
RGPD6-208ENST00000473101 MDM2Q00987 491 aaPredicted RBP6.88□□□□□ -1.31
RGPD6-208ENST00000473101 ZNF697Q5TEC3 545 aa6.88□□□□□ -1.31
RGPD6-208ENST00000473101 TRIM67Q6ZTA4 783 aa6.88□□□□□ -1.31
RGPD6-208ENST00000473101 SUPT5HO00267 1087 aaKnown RBP6.87□□□□□ -1.31
RGPD6-208ENST00000473101 IRF6O14896 467 aa6.87□□□□□ -1.31
RGPD6-208ENST00000473101 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
RGPD6-208ENST00000473101 ZNF598Q86UK7 904 aaKnown RBP6.87□□□□□ -1.31
RGPD6-208ENST00000473101 TNFRSF10AO00220 468 aa6.86□□□□□ -1.31
RGPD6-208ENST00000473101 CCDC102AQ96A19 550 aa6.86□□□□□ -1.31
RGPD6-208ENST00000473101 THAP11Q96EK4 314 aa6.86□□□□□ -1.31
RGPD6-208ENST00000473101 PRDM9Q9NQV7 894 aa6.86□□□□□ -1.31
RGPD6-208ENST00000473101 CD46P15529 392 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms