RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 C14orf37Q86TY3 774 aa16.58■□□□□ 0.24
CDHR3-209ENST00000472116 AFF2P51816 1311 aa16.58■□□□□ 0.24
CDHR3-209ENST00000472116 AHDC1Q5TGY3 1603 aaPredicted RBP16.58■□□□□ 0.24
CDHR3-209ENST00000472116 MROH1Q8NDA8 1641 aa16.57■□□□□ 0.24
CDHR3-209ENST00000472116 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
CDHR3-209ENST00000472116 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
CDHR3-209ENST00000472116 TET3O43151 1660 aa16.56■□□□□ 0.24
CDHR3-209ENST00000472116 RGS12O14924 1447 aa16.56■□□□□ 0.24
CDHR3-209ENST00000472116 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
CDHR3-209ENST00000472116 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
CDHR3-209ENST00000472116 ARHGAP31Q2M1Z3 1444 aa16.53■□□□□ 0.24
CDHR3-209ENST00000472116 MAST1Q9Y2H9 1570 aa16.53■□□□□ 0.24
CDHR3-209ENST00000472116 NGLY1Q96IV0 654 aa16.52■□□□□ 0.24
CDHR3-209ENST00000472116 ATF3P18847 181 aa16.51■□□□□ 0.23
CDHR3-209ENST00000472116 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
CDHR3-209ENST00000472116 QTRT2Q9H974 415 aaKnown RBP16.51■□□□□ 0.23
CDHR3-209ENST00000472116 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
CDHR3-209ENST00000472116 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
CDHR3-209ENST00000472116 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
CDHR3-209ENST00000472116 DIP2AQ14689 1571 aa16.48■□□□□ 0.23
CDHR3-209ENST00000472116 C8orf37Q96NL8 207 aa16.48■□□□□ 0.23
CDHR3-209ENST00000472116 DUOX2Q9NRD8 1548 aa16.48■□□□□ 0.23
CDHR3-209ENST00000472116 ADGRB3O60242 1522 aa16.46■□□□□ 0.23
CDHR3-209ENST00000472116 KANK1Q14678 1352 aa16.46■□□□□ 0.23
CDHR3-209ENST00000472116 PPP1R15AO75807 674 aaPredicted RBP16.45■□□□□ 0.22
CDHR3-209ENST00000472116 IDI1Q13907 227 aa16.44■□□□□ 0.22
CDHR3-209ENST00000472116 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
CDHR3-209ENST00000472116 HDGFP51858 240 aaKnown RBP16.43■□□□□ 0.22
CDHR3-209ENST00000472116 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
CDHR3-209ENST00000472116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.222e-8■□□□□ 11
CDHR3-209ENST00000472116 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
CDHR3-209ENST00000472116 LRRC59Q96AG4 307 aaKnown RBP16.41■□□□□ 0.22
CDHR3-209ENST00000472116 NHSL1Q5SYE7 1610 aa16.41■□□□□ 0.22
CDHR3-209ENST00000472116 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
CDHR3-209ENST00000472116 SETD5Q9C0A6 1442 aa16.4■□□□□ 0.22
CDHR3-209ENST00000472116 BRINP3Q76B58 766 aa16.4■□□□□ 0.22
CDHR3-209ENST00000472116 ERBINQ96RT1 1412 aa16.39■□□□□ 0.21
CDHR3-209ENST00000472116 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
CDHR3-209ENST00000472116 LRP5O75197 1615 aa16.37■□□□□ 0.21
CDHR3-209ENST00000472116 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
CDHR3-209ENST00000472116 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
CDHR3-209ENST00000472116 GCC2Q8IWJ2 1684 aa16.37■□□□□ 0.21
CDHR3-209ENST00000472116 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
CDHR3-209ENST00000472116 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
CDHR3-209ENST00000472116 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
CDHR3-209ENST00000472116 USP21Q9UK80 565 aa16.35■□□□□ 0.21
CDHR3-209ENST00000472116 DCCP43146 1447 aa16.34■□□□□ 0.21
CDHR3-209ENST00000472116 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
CDHR3-209ENST00000472116 EP400Q96L91 3159 aa16.33■□□□□ 0.21
CDHR3-209ENST00000472116 PNPLA6Q8IY17 1366 aa16.33■□□□□ 0.2
CDHR3-209ENST00000472116 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
CDHR3-209ENST00000472116 LMTK2Q8IWU2 1503 aa16.33■□□□□ 0.2
CDHR3-209ENST00000472116 CROCC2H7BZ55 1655 aa16.32■□□□□ 0.2
CDHR3-209ENST00000472116 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
CDHR3-209ENST00000472116 NOS1P29475 1434 aa16.32■□□□□ 0.2
CDHR3-209ENST00000472116 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDHR3-209ENST00000472116 MYOM3Q5VTT5 1437 aa16.31■□□□□ 0.2
CDHR3-209ENST00000472116 TRPM2O94759 1503 aa16.3■□□□□ 0.2
CDHR3-209ENST00000472116 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
CDHR3-209ENST00000472116 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
CDHR3-209ENST00000472116 TMEM131LA2VDJ0 1609 aa16.27■□□□□ 0.2
CDHR3-209ENST00000472116 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.19
CDHR3-209ENST00000472116 MST1RQ04912 1400 aa16.27■□□□□ 0.19
CDHR3-209ENST00000472116 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
CDHR3-209ENST00000472116 ATRNO75882 1429 aa16.26■□□□□ 0.19
CDHR3-209ENST00000472116 PTCH1Q13635 1447 aa16.26■□□□□ 0.19
CDHR3-209ENST00000472116 RPRD2Q5VT52 1461 aaKnown RBP16.25■□□□□ 0.19
CDHR3-209ENST00000472116 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
CDHR3-209ENST00000472116 ADAMTS13Q76LX8 1427 aa16.25■□□□□ 0.19
CDHR3-209ENST00000472116 FNBP4Q8N3X1 1017 aaPredicted RBP16.23■□□□□ 0.19
CDHR3-209ENST00000472116 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
CDHR3-209ENST00000472116 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
CDHR3-209ENST00000472116 XRN1Q8IZH2 1706 aaKnown RBP16.2■□□□□ 0.18
CDHR3-209ENST00000472116 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
CDHR3-209ENST00000472116 UNC13BO14795 1591 aa16.19■□□□□ 0.18
CDHR3-209ENST00000472116 DEFB132Q7Z7B7 95 aa16.19■□□□□ 0.18
CDHR3-209ENST00000472116 BRWD3Q6RI45 1802 aa16.19■□□□□ 0.18
CDHR3-209ENST00000472116 ANKRD30AQ9BXX3 1397 aa16.18■□□□□ 0.18
CDHR3-209ENST00000472116 SPHKAPQ2M3C7 1700 aa16.18■□□□□ 0.18
CDHR3-209ENST00000472116 ABCC5O15440 1437 aa16.18■□□□□ 0.18
CDHR3-209ENST00000472116 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
CDHR3-209ENST00000472116 LAMC1P11047 1609 aa16.17■□□□□ 0.18
CDHR3-209ENST00000472116 COL22A1Q8NFW1 1626 aaPredicted RBP16.17■□□□□ 0.18
CDHR3-209ENST00000472116 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
CDHR3-209ENST00000472116 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
CDHR3-209ENST00000472116 ADGRL3Q9HAR2 1447 aa16.17■□□□□ 0.18
CDHR3-209ENST00000472116 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.16■□□□□ 0.18
CDHR3-209ENST00000472116 YY1P25490 414 aa16.16■□□□□ 0.18
CDHR3-209ENST00000472116 PSDA5PKW4 1024 aaPredicted RBP16.15■□□□□ 0.18
CDHR3-209ENST00000472116 PTPN23Q9H3S7 1636 aa16.15■□□□□ 0.18
CDHR3-209ENST00000472116 DAPK1P53355 1430 aa16.14■□□□□ 0.17
CDHR3-209ENST00000472116 HRCP23327 699 aa16.13■□□□□ 0.17
CDHR3-209ENST00000472116 SOS2Q07890 1332 aaPredicted RBP16.13■□□□□ 0.17
CDHR3-209ENST00000472116 BCL9LQ86UU0 1499 aa16.12■□□□□ 0.17
CDHR3-209ENST00000472116 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
CDHR3-209ENST00000472116 BAG6P46379 1132 aa16.11■□□□□ 0.17
CDHR3-209ENST00000472116 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
CDHR3-209ENST00000472116 GLI3P10071 1580 aa16.09■□□□□ 0.17
CDHR3-209ENST00000472116 NRXN3Q9Y4C0 1643 aa16.08■□□□□ 0.17
CDHR3-209ENST00000472116 MYOM2P54296 1465 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms