RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
CD47-204ENST00000471694 NGLY1Q96IV0 654 aa10.62□□□□□ -0.71
CD47-204ENST00000471694 SF3A1Q15459 793 aaKnown RBP10.62□□□□□ -0.71
CD47-204ENST00000471694 RWDD1Q9H446 243 aaPredicted RBP10.61□□□□□ -0.71
CD47-204ENST00000471694 SPDYE4A6NLX3 237 aa10.61□□□□□ -0.71
CD47-204ENST00000471694 GRM1Q13255 1194 aa10.61□□□□□ -0.71
CD47-204ENST00000471694 SMG6Q86US8 1419 aaKnown RBP10.61□□□□□ -0.71
CD47-204ENST00000471694 RILPL2Q969X0 211 aa10.61□□□□□ -0.71
CD47-204ENST00000471694 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
CD47-204ENST00000471694 SETD5Q9C0A6 1442 aa10.61□□□□□ -0.71
CD47-204ENST00000471694 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
CD47-204ENST00000471694 NFXL1Q6ZNB6 911 aa10.6□□□□□ -0.71
CD47-204ENST00000471694 TPM2P07951 284 aa10.6□□□□□ -0.71
CD47-204ENST00000471694 TATP17735 454 aaPredicted RBP10.6□□□□□ -0.71
CD47-204ENST00000471694 RRP7AQ9Y3A4 280 aaKnown RBP10.6□□□□□ -0.71
CD47-204ENST00000471694 PMFBP1Q8TBY8 1022 aa10.6□□□□□ -0.71
CD47-204ENST00000471694 DHX57Q6P158 1386 aaKnown RBP10.6□□□□□ -0.71
CD47-204ENST00000471694 MIER1Q8N108 512 aa10.6□□□□□ -0.71
CD47-204ENST00000471694 H3BQV1 296 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 TRIM29Q14134 588 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 IFFO2Q5TF58 517 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 ATP2B2Q01814 1243 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 KIF16BQ96L93 1317 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 PRDM11Q9NQV5 511 aa10.59□□□□□ -0.71
CD47-204ENST00000471694 UBAP1LF5GYI3 381 aa10.58□□□□□ -0.72
CD47-204ENST00000471694 CABP4P57796 275 aa10.58□□□□□ -0.72
CD47-204ENST00000471694 TRDNQ13061 729 aa10.58□□□□□ -0.72
CD47-204ENST00000471694 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
CD47-204ENST00000471694 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
CD47-204ENST00000471694 G3BP1Q13283 466 aaKnown RBP eCLIP10.58□□□□□ -0.72
CD47-204ENST00000471694 RALBP1Q15311 655 aa10.57□□□□□ -0.72
CD47-204ENST00000471694 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
CD47-204ENST00000471694 CLUAP1Q96AJ1 413 aa10.57□□□□□ -0.72
CD47-204ENST00000471694 NEUROD6Q96NK8 337 aa10.57□□□□□ -0.72
CD47-204ENST00000471694 ARHGAP5Q13017 1502 aa10.57□□□□□ -0.72
CD47-204ENST00000471694 MPHOSPH10O00566 681 aaKnown RBP10.57□□□□□ -0.72
CD47-204ENST00000471694 TSPYL4Q9UJ04 414 aa10.57□□□□□ -0.72
CD47-204ENST00000471694 GLIPR1L2Q4G1C9 344 aa10.56□□□□□ -0.72
CD47-204ENST00000471694 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
CD47-204ENST00000471694 PPM1FP49593 454 aaPredicted RBP10.56□□□□□ -0.72
CD47-204ENST00000471694 CPLX2Q6PUV4 134 aaKnown RBP10.56□□□□□ -0.72
CD47-204ENST00000471694 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
CD47-204ENST00000471694 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
CD47-204ENST00000471694 ZSCAN29Q8IWY8 852 aaPredicted RBP10.55□□□□□ -0.72
CD47-204ENST00000471694 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
CD47-204ENST00000471694 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
CD47-204ENST00000471694 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
CD47-204ENST00000471694 DIAPH3Q9NSV4 1193 aa10.55□□□□□ -0.72
CD47-204ENST00000471694 PCMTD1Q96MG8 357 aaPredicted RBP10.54□□□□□ -0.72
CD47-204ENST00000471694 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
CD47-204ENST00000471694 MROH2BQ7Z745 1585 aa10.54□□□□□ -0.72
CD47-204ENST00000471694 CHMP4BP1P59074 171 aa10.54□□□□□ -0.72
CD47-204ENST00000471694 FKBP5Q13451 457 aaPredicted RBP10.54□□□□□ -0.72
CD47-204ENST00000471694 CSPP1Q1MSJ5 1256 aa10.54□□□□□ -0.72
CD47-204ENST00000471694 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
CD47-204ENST00000471694 TSR1Q2NL82 804 aaKnown RBP10.54□□□□□ -0.72
CD47-204ENST00000471694 MIA2Q96PC5 1412 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 CHMP4CQ96CF2 233 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 CNNM1Q9NRU3 951 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 MCTP1Q6DN14 999 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 AQRO60306 1485 aaKnown RBP eCLIP10.53□□□□□ -0.72
CD47-204ENST00000471694 TPM3P06753 285 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 GNL3LQ9NVN8 582 aaKnown RBP10.53□□□□□ -0.72
CD47-204ENST00000471694 SPG7Q9UQ90 795 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 ZPR1O75312 459 aa10.53□□□□□ -0.72
CD47-204ENST00000471694 CENPJQ9HC77 1338 aaPredicted RBP10.52□□□□□ -0.73
CD47-204ENST00000471694 SLC3A2P08195 630 aaKnown RBP10.52□□□□□ -0.73
CD47-204ENST00000471694 MFAP1P55081 439 aaKnown RBP10.52□□□□□ -0.73
CD47-204ENST00000471694 TMOD2Q9NZR1 351 aa10.52□□□□□ -0.73
CD47-204ENST00000471694 HMOX1P09601 288 aa10.52□□□□□ -0.73
CD47-204ENST00000471694 CPLX1O14810 134 aa10.51□□□□□ -0.73
CD47-204ENST00000471694 TOM1O60784 492 aa10.51□□□□□ -0.73
CD47-204ENST00000471694 ODF2Q5BJF6 829 aa10.51□□□□□ -0.73
CD47-204ENST00000471694 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
CD47-204ENST00000471694 NLRP13Q86W25 1043 aa10.51□□□□□ -0.73
CD47-204ENST00000471694 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
CD47-204ENST00000471694 TBC1D2BQ9UPU7 963 aa10.5□□□□□ -0.73
CD47-204ENST00000471694 PRG4Q92954 1404 aaPredicted RBP10.5□□□□□ -0.73
CD47-204ENST00000471694 SLC26A8Q96RN1 970 aa10.5□□□□□ -0.73
CD47-204ENST00000471694 PANK3Q9H999 370 aa10.5□□□□□ -0.73
CD47-204ENST00000471694 WDR70Q9NW82 654 aa10.5□□□□□ -0.73
CD47-204ENST00000471694 RUFY2Q8WXA3 655 aa10.49□□□□□ -0.73
CD47-204ENST00000471694 CT47A1Q5JQC4 288 aaPredicted RBP10.49□□□□□ -0.73
CD47-204ENST00000471694 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
CD47-204ENST00000471694 WDR78Q5VTH9 848 aa10.49□□□□□ -0.73
CD47-204ENST00000471694 VSIG10Q8N0Z9 540 aa10.48□□□□□ -0.73
CD47-204ENST00000471694 SYAP1Q96A49 352 aaPredicted RBP10.48□□□□□ -0.73
CD47-204ENST00000471694 TMEM132EQ6IEE7 984 aa10.48□□□□□ -0.73
CD47-204ENST00000471694 WIZO95785 1651 aa10.48□□□□□ -0.73
CD47-204ENST00000471694 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
CD47-204ENST00000471694 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
CD47-204ENST00000471694 RIPK4P57078 832 aa10.48□□□□□ -0.73
CD47-204ENST00000471694 ATAD2BQ9ULI0 1458 aa10.48□□□□□ -0.73
CD47-204ENST00000471694 PPP4R2Q9NY27 417 aa10.47□□□□□ -0.73
CD47-204ENST00000471694 KDM4AO75164 1064 aa10.47□□□□□ -0.73
CD47-204ENST00000471694 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
CD47-204ENST00000471694 ZFYVE27Q5T4F4 411 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms