RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 NUP155O75694 1391 aa18.69■□□□□ 0.58
LINC00888-202ENST00000471496 UBR1Q8IWV7 1749 aa18.68■□□□□ 0.58
LINC00888-202ENST00000471496 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
LINC00888-202ENST00000471496 UGGT1Q9NYU2 1555 aa18.67■□□□□ 0.58
LINC00888-202ENST00000471496 PIK3C2BO00750 1634 aa18.66■□□□□ 0.58
LINC00888-202ENST00000471496 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
LINC00888-202ENST00000471496 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
LINC00888-202ENST00000471496 NEURL4Q96JN8 1562 aa18.61■□□□□ 0.57
LINC00888-202ENST00000471496 IDI1Q13907 227 aa18.6■□□□□ 0.57
LINC00888-202ENST00000471496 PTPRTO14522 1441 aa18.6■□□□□ 0.57
LINC00888-202ENST00000471496 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
LINC00888-202ENST00000471496 SPHKAPQ2M3C7 1700 aa18.6■□□□□ 0.57
LINC00888-202ENST00000471496 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
LINC00888-202ENST00000471496 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
LINC00888-202ENST00000471496 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
LINC00888-202ENST00000471496 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.57
LINC00888-202ENST00000471496 ARHGAP23Q9P227 1491 aa18.57■□□□□ 0.56
LINC00888-202ENST00000471496 PKD2Q13563 968 aa18.57■□□□□ 0.56
LINC00888-202ENST00000471496 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
LINC00888-202ENST00000471496 SLIT1O75093 1534 aa18.57■□□□□ 0.56
LINC00888-202ENST00000471496 SLC52A1Q9NWF4 448 aa18.56■□□□□ 0.56
LINC00888-202ENST00000471496 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
LINC00888-202ENST00000471496 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
LINC00888-202ENST00000471496 SSUH2Q9Y2M2 353 aa18.55■□□□□ 0.56
LINC00888-202ENST00000471496 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
LINC00888-202ENST00000471496 MED14O60244 1454 aa18.53■□□□□ 0.56
LINC00888-202ENST00000471496 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.55
LINC00888-202ENST00000471496 TRPM2O94759 1503 aa18.51■□□□□ 0.55
LINC00888-202ENST00000471496 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
LINC00888-202ENST00000471496 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
LINC00888-202ENST00000471496 CLTCL1P53675 1640 aa18.5■□□□□ 0.55
LINC00888-202ENST00000471496 SCAF11Q99590 1463 aaKnown RBP18.49■□□□□ 0.55
LINC00888-202ENST00000471496 LTKP29376 864 aa18.49■□□□□ 0.55
LINC00888-202ENST00000471496 NPHP4O75161 1426 aaPredicted RBP18.48■□□□□ 0.55
LINC00888-202ENST00000471496 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
LINC00888-202ENST00000471496 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
LINC00888-202ENST00000471496 MPHOSPH9Q99550 1183 aa18.46■□□□□ 0.55
LINC00888-202ENST00000471496 STAG3Q9UJ98 1225 aa18.46■□□□□ 0.55
LINC00888-202ENST00000471496 ZFYVE9O95405 1425 aa18.46■□□□□ 0.55
LINC00888-202ENST00000471496 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
LINC00888-202ENST00000471496 TXNDC2Q86VQ3 553 aa18.45■□□□□ 0.54
LINC00888-202ENST00000471496 KIF1BO60333 1816 aa18.44■□□□□ 0.54
LINC00888-202ENST00000471496 HRCP23327 699 aa18.43■□□□□ 0.54
LINC00888-202ENST00000471496 ZNF335Q9H4Z2 1342 aaPredicted RBP18.42■□□□□ 0.54
LINC00888-202ENST00000471496 RIMS2Q9UQ26 1411 aa18.42■□□□□ 0.54
LINC00888-202ENST00000471496 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
LINC00888-202ENST00000471496 SPDYE1Q8NFV5 336 aaPredicted RBP18.4■□□□□ 0.54
LINC00888-202ENST00000471496 EID1Q9Y6B2 187 aa18.4■□□□□ 0.54
LINC00888-202ENST00000471496 CHGAP10645 457 aaKnown RBP18.39■□□□□ 0.54
LINC00888-202ENST00000471496 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
LINC00888-202ENST00000471496 NEXMIFQ5QGS0 1516 aa18.36■□□□□ 0.53
LINC00888-202ENST00000471496 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
LINC00888-202ENST00000471496 NRXN3Q9Y4C0 1643 aa18.33■□□□□ 0.52
LINC00888-202ENST00000471496 NUTM2DQ5VT03 806 aaPredicted RBP18.33■□□□□ 0.52
LINC00888-202ENST00000471496 PPLO60437 1756 aa18.32■□□□□ 0.52
LINC00888-202ENST00000471496 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
LINC00888-202ENST00000471496 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
LINC00888-202ENST00000471496 SPATA31E1Q6ZUB1 1445 aa18.31■□□□□ 0.52
LINC00888-202ENST00000471496 CPS1P31327 1500 aa18.31■□□□□ 0.52
LINC00888-202ENST00000471496 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
LINC00888-202ENST00000471496 SLC26A8Q96RN1 970 aa18.31■□□□□ 0.52
LINC00888-202ENST00000471496 ADAMTS13Q76LX8 1427 aa18.31■□□□□ 0.52
LINC00888-202ENST00000471496 IFT172Q9UG01 1749 aa18.3■□□□□ 0.52
LINC00888-202ENST00000471496 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
LINC00888-202ENST00000471496 ANKRD30BQ9BXX2 1392 aa18.3■□□□□ 0.52
LINC00888-202ENST00000471496 IQSEC2Q5JU85 1478 aa18.3■□□□□ 0.52
LINC00888-202ENST00000471496 PIP4P2Q8N4L2 257 aa18.29■□□□□ 0.52
LINC00888-202ENST00000471496 CHD2O14647 1828 aaKnown RBP18.29■□□□□ 0.52
LINC00888-202ENST00000471496 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
LINC00888-202ENST00000471496 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
LINC00888-202ENST00000471496 FXR2P51116 673 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC00888-202ENST00000471496 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
LINC00888-202ENST00000471496 XIRP1Q702N8 1843 aaKnown RBP18.27■□□□□ 0.52
LINC00888-202ENST00000471496 DIP2AQ14689 1571 aa18.27■□□□□ 0.52
LINC00888-202ENST00000471496 NWD1Q149M9 1564 aa18.27■□□□□ 0.52
LINC00888-202ENST00000471496 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
LINC00888-202ENST00000471496 LRRC7Q96NW7 1537 aa18.26■□□□□ 0.51
LINC00888-202ENST00000471496 FBXO41Q8TF61 875 aa18.25■□□□□ 0.51
LINC00888-202ENST00000471496 TBX22Q9Y458 520 aa18.25■□□□□ 0.51
LINC00888-202ENST00000471496 SETD1AO15047 1707 aaKnown RBP18.25■□□□□ 0.51
LINC00888-202ENST00000471496 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
LINC00888-202ENST00000471496 ILDR1Q86SU0 546 aaPredicted RBP18.24■□□□□ 0.51
LINC00888-202ENST00000471496 BCANQ96GW7 911 aa18.23■□□□□ 0.51
LINC00888-202ENST00000471496 KCNA6P17658 529 aa18.22■□□□□ 0.51
LINC00888-202ENST00000471496 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
LINC00888-202ENST00000471496 PTPRUQ92729 1446 aa18.2■□□□□ 0.5
LINC00888-202ENST00000471496 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
LINC00888-202ENST00000471496 NKTRP30414 1462 aaKnown RBP18.19■□□□□ 0.5
LINC00888-202ENST00000471496 ALKQ9UM73 1620 aa18.19■□□□□ 0.5
LINC00888-202ENST00000471496 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
LINC00888-202ENST00000471496 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
LINC00888-202ENST00000471496 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
LINC00888-202ENST00000471496 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
LINC00888-202ENST00000471496 METP08581 1390 aa18.17■□□□□ 0.5
LINC00888-202ENST00000471496 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
LINC00888-202ENST00000471496 MYOM2P54296 1465 aa18.14■□□□□ 0.49
LINC00888-202ENST00000471496 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.49
LINC00888-202ENST00000471496 TMEM94Q12767 1356 aa18.13■□□□□ 0.49
LINC00888-202ENST00000471496 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
LINC00888-202ENST00000471496 RBM33Q96EV2 1170 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms