RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FOSBP53539 338 aa11.86□□□□□ -0.51
SMC5-202ENST00000471372 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
SMC5-202ENST00000471372 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
SMC5-202ENST00000471372 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
SMC5-202ENST00000471372 LIMD1Q9UGP4 676 aa11.85□□□□□ -0.51
SMC5-202ENST00000471372 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
SMC5-202ENST00000471372 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
SMC5-202ENST00000471372 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
SMC5-202ENST00000471372 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
SMC5-202ENST00000471372 GPR153Q6NV75 609 aa11.81□□□□□ -0.52
SMC5-202ENST00000471372 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
SMC5-202ENST00000471372 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
SMC5-202ENST00000471372 DIXDC1Q155Q3 683 aa11.8□□□□□ -0.52
SMC5-202ENST00000471372 PRSS12P56730 875 aa11.79□□□□□ -0.52
SMC5-202ENST00000471372 TMEM259Q4ZIN3 620 aa11.79□□□□□ -0.52
SMC5-202ENST00000471372 PPP2R2DQ66LE6 453 aa11.79□□□□□ -0.52
SMC5-202ENST00000471372 RIC3Q7Z5B4 369 aa11.79□□□□□ -0.52
SMC5-202ENST00000471372 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
SMC5-202ENST00000471372 ADAM33Q9BZ11 813 aa11.79□□□□□ -0.52
SMC5-202ENST00000471372 MTMR14Q8NCE2 650 aa11.78□□□□□ -0.52
SMC5-202ENST00000471372 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
SMC5-202ENST00000471372 CDCA7LQ96GN5 454 aa11.78□□□□□ -0.52
SMC5-202ENST00000471372 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
SMC5-202ENST00000471372 TRAIPQ9BWF2 469 aa11.77□□□□□ -0.53
SMC5-202ENST00000471372 GDPD2Q9HCC8 539 aa11.77□□□□□ -0.53
SMC5-202ENST00000471372 FAM198AQ9UFP1 575 aa11.76□□□□□ -0.53
SMC5-202ENST00000471372 CCDC9Q9Y3X0 531 aaKnown RBP11.76□□□□□ -0.53
SMC5-202ENST00000471372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
SMC5-202ENST00000471372 RCCD1A6NED2 376 aa11.74□□□□□ -0.53
SMC5-202ENST00000471372 CD46P15529 392 aa11.74□□□□□ -0.53
SMC5-202ENST00000471372 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMC5-202ENST00000471372 SPTLC1O15269 473 aa11.73□□□□□ -0.53
SMC5-202ENST00000471372 NUDT7P0C024 238 aa11.73□□□□□ -0.53
SMC5-202ENST00000471372 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
SMC5-202ENST00000471372 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
SMC5-202ENST00000471372 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
SMC5-202ENST00000471372 TUSC1Q2TAM9 212 aa11.71□□□□□ -0.53
SMC5-202ENST00000471372 RETREG2Q8NC44 543 aa11.71□□□□□ -0.53
SMC5-202ENST00000471372 EYA1Q99502 592 aa11.71□□□□□ -0.53
SMC5-202ENST00000471372 MOXD2PA6NHM9 499 aa11.7□□□□□ -0.54
SMC5-202ENST00000471372 QPCTQ16769 361 aa11.7□□□□□ -0.54
SMC5-202ENST00000471372 ABL2P42684 1182 aa11.69□□□□□ -0.54
SMC5-202ENST00000471372 POM121CA8CG34 1229 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 DDX11L8A8MPP1 907 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 C3orf80F5H4A9 247 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 NDUFV2P19404 249 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 COL9A1P20849 921 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
SMC5-202ENST00000471372 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
SMC5-202ENST00000471372 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
SMC5-202ENST00000471372 LILRB3O75022 631 aa11.66□□□□□ -0.54
SMC5-202ENST00000471372 AP1G2O75843 785 aa11.66□□□□□ -0.54
SMC5-202ENST00000471372 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
SMC5-202ENST00000471372 SULF1Q8IWU6 871 aa11.66□□□□□ -0.54
SMC5-202ENST00000471372 CALR3Q96L12 384 aaKnown RBP11.66□□□□□ -0.54
SMC5-202ENST00000471372 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
SMC5-202ENST00000471372 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
SMC5-202ENST00000471372 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
SMC5-202ENST00000471372 WWC1Q8IX03 1113 aa11.64□□□□□ -0.55
SMC5-202ENST00000471372 GLMNQ92990 594 aa11.64□□□□□ -0.55
SMC5-202ENST00000471372 SOCS7O14512 581 aa11.63□□□□□ -0.55
SMC5-202ENST00000471372 IRF5Q13568 498 aa11.63□□□□□ -0.55
SMC5-202ENST00000471372 CABLES1Q8TDN4 633 aa11.63□□□□□ -0.55
SMC5-202ENST00000471372 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
SMC5-202ENST00000471372 DNAJB2P25686 324 aa11.62□□□□□ -0.55
SMC5-202ENST00000471372 MYT1LQ9UL68 1186 aa11.62□□□□□ -0.55
SMC5-202ENST00000471372 GJA5P36382 358 aa11.61□□□□□ -0.55
SMC5-202ENST00000471372 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
SMC5-202ENST00000471372 PRM3Q9NNZ6 103 aa11.61□□□□□ -0.55
SMC5-202ENST00000471372 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
SMC5-202ENST00000471372 NUTM2BA6NNL0 878 aaPredicted RBP11.59□□□□□ -0.55
SMC5-202ENST00000471372 NUTM2EB1AL46 878 aaPredicted RBP11.59□□□□□ -0.55
SMC5-202ENST00000471372 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
SMC5-202ENST00000471372 NUTM2DQ5VT03 806 aaPredicted RBP11.59□□□□□ -0.55
SMC5-202ENST00000471372 ANKRD13DQ6ZTN6 518 aa11.59□□□□□ -0.55
SMC5-202ENST00000471372 NUTM2AQ8IVF1 878 aaPredicted RBP11.59□□□□□ -0.55
SMC5-202ENST00000471372 TATDN2Q93075 761 aa11.59□□□□□ -0.55
SMC5-202ENST00000471372 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
SMC5-202ENST00000471372 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
SMC5-202ENST00000471372 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
SMC5-202ENST00000471372 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
SMC5-202ENST00000471372 RDH13Q8NBN7 331 aa11.57□□□□□ -0.56
SMC5-202ENST00000471372 GJD4Q96KN9 370 aaPredicted RBP11.57□□□□□ -0.56
SMC5-202ENST00000471372 PPP4R3BQ5MIZ7 849 aa11.56□□□□□ -0.56
SMC5-202ENST00000471372 TRIM6-TRIM34B2RNG4 842 aa11.55□□□□□ -0.56
SMC5-202ENST00000471372 SMAPO00193 183 aa11.55□□□□□ -0.56
SMC5-202ENST00000471372 KDM4AO75164 1064 aa11.55□□□□□ -0.56
SMC5-202ENST00000471372 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMC5-202ENST00000471372 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
SMC5-202ENST00000471372 ADAMTS19Q8TE59 1207 aa11.54□□□□□ -0.56
SMC5-202ENST00000471372 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
SMC5-202ENST00000471372 PTPREP23469 700 aa11.53□□□□□ -0.56
SMC5-202ENST00000471372 PBX2P40425 430 aa11.53□□□□□ -0.56
SMC5-202ENST00000471372 HDGFL1Q5TGJ6 251 aa11.53□□□□□ -0.56
SMC5-202ENST00000471372 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
SMC5-202ENST00000471372 NDUFB9Q9Y6M9 179 aa11.53□□□□□ -0.56
SMC5-202ENST00000471372 PACS2Q86VP3 889 aa11.52□□□□□ -0.57
SMC5-202ENST00000471372 GZF1Q9H116 711 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms