RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC8-216ENST00000470998 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
HDAC8-216ENST00000470998 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
HDAC8-216ENST00000470998 PPARGC1BQ86YN6 1023 aaKnown RBP8.42□□□□□ -1.06
HDAC8-216ENST00000470998 AFAP1Q8N556 730 aa8.42□□□□□ -1.06
HDAC8-216ENST00000470998 LRRC9Q6ZRR7 1453 aa8.42□□□□□ -1.06
HDAC8-216ENST00000470998 MLH3Q9UHC1 1453 aa8.42□□□□□ -1.06
HDAC8-216ENST00000470998 PCF11O94913 1555 aaKnown RBP8.42□□□□□ -1.06
HDAC8-216ENST00000470998 KDM5CP41229 1560 aa8.42□□□□□ -1.06
HDAC8-216ENST00000470998 MADDQ8WXG6 1647 aa8.41□□□□□ -1.06
HDAC8-216ENST00000470998 CCNB3Q8WWL7 1395 aa8.41□□□□□ -1.06
HDAC8-216ENST00000470998 PPP1R37O75864 691 aa8.41□□□□□ -1.06
HDAC8-216ENST00000470998 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
HDAC8-216ENST00000470998 TMEM121BQ9BXQ6 578 aaPredicted RBP8.4□□□□□ -1.06
HDAC8-216ENST00000470998 MYT1LQ9UL68 1186 aa8.4□□□□□ -1.06
HDAC8-216ENST00000470998 REREQ9P2R6 1566 aa8.39□□□□□ -1.07
HDAC8-216ENST00000470998 ARHGEF12Q9NZN5 1544 aa8.39□□□□□ -1.07
HDAC8-216ENST00000470998 PLEKHH2Q8IVE3 1493 aa8.39□□□□□ -1.07
HDAC8-216ENST00000470998 KIAA1107Q9UPP5 1409 aa8.39□□□□□ -1.07
HDAC8-216ENST00000470998 MLECQ14165 292 aa8.39□□□□□ -1.07
HDAC8-216ENST00000470998 ABCC1P33527 1531 aa8.39□□□□□ -1.07
HDAC8-216ENST00000470998 AGLP35573 1532 aa8.39□□□□□ -1.07
HDAC8-216ENST00000470998 GPATCH8Q9UKJ3 1502 aaKnown RBP8.39□□□□□ -1.07
HDAC8-216ENST00000470998 LMTK3Q96Q04 1460 aa8.38□□□□□ -1.07
HDAC8-216ENST00000470998 MTUS2Q5JR59 1369 aa8.38□□□□□ -1.07
HDAC8-216ENST00000470998 TMC2Q8TDI7 906 aa8.38□□□□□ -1.07
HDAC8-216ENST00000470998 PREX2Q70Z35 1606 aa8.38□□□□□ -1.07
HDAC8-216ENST00000470998 TRAPPC8Q9Y2L5 1435 aa8.37□□□□□ -1.07
HDAC8-216ENST00000470998 CFDP1Q9UEE9 299 aaPredicted RBP8.37□□□□□ -1.07
HDAC8-216ENST00000470998 LRRIQ1Q96JM4 1722 aa8.37□□□□□ -1.07
HDAC8-216ENST00000470998 RIMS1Q86UR5 1692 aaKnown RBP8.37□□□□□ -1.07
HDAC8-216ENST00000470998 ESF1Q9H501 851 aaKnown RBP8.36□□□□□ -1.07
HDAC8-216ENST00000470998 ZNF777Q9ULD5 760 aaPredicted RBP8.36□□□□□ -1.07
HDAC8-216ENST00000470998 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
HDAC8-216ENST00000470998 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
HDAC8-216ENST00000470998 DIP2CQ9Y2E4 1556 aa8.35□□□□□ -1.07
HDAC8-216ENST00000470998 SPAG9O60271 1321 aaKnown RBP8.35□□□□□ -1.07
HDAC8-216ENST00000470998 EHBP1L1Q8N3D4 1523 aa8.35□□□□□ -1.07
HDAC8-216ENST00000470998 KANK4Q5T7N3 995 aaPredicted RBP8.35□□□□□ -1.07
HDAC8-216ENST00000470998 RSPH4AQ5TD94 716 aa8.35□□□□□ -1.07
HDAC8-216ENST00000470998 FBXO41Q8TF61 875 aa8.34□□□□□ -1.07
HDAC8-216ENST00000470998 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.08
HDAC8-216ENST00000470998 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
HDAC8-216ENST00000470998 SNPHO15079 494 aa8.33□□□□□ -1.08
HDAC8-216ENST00000470998 HNRNPMP52272 730 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC8-216ENST00000470998 SIGLEC1Q9BZZ2 1709 aa8.33□□□□□ -1.08
HDAC8-216ENST00000470998 FER1L4A9Z1Z3 1794 aa8.33□□□□□ -1.08
HDAC8-216ENST00000470998 CDC42BPAQ5VT25 1732 aa8.32□□□□□ -1.08
HDAC8-216ENST00000470998 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
HDAC8-216ENST00000470998 RTEL1-TNFRSF6BF6WH68 1400 aa8.32□□□□□ -1.08
HDAC8-216ENST00000470998 UHRF1BP1Q6BDS2 1440 aa8.32□□□□□ -1.08
HDAC8-216ENST00000470998 HSPA2P54652 639 aa8.32□□□□□ -1.08
HDAC8-216ENST00000470998 SYCP2Q9BX26 1530 aa8.32□□□□□ -1.08
HDAC8-216ENST00000470998 ABCA6Q8N139 1617 aa8.32□□□□□ -1.08
HDAC8-216ENST00000470998 CEBPAP49715 358 aaPredicted RBP8.31□□□□□ -1.08
HDAC8-216ENST00000470998 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
HDAC8-216ENST00000470998 A2MP01023 1474 aa8.31□□□□□ -1.08
HDAC8-216ENST00000470998 KIDINS220Q9ULH0 1771 aa8.3□□□□□ -1.08
HDAC8-216ENST00000470998 NPATQ14207 1427 aa8.29□□□□□ -1.08
HDAC8-216ENST00000470998 ATP7AQ04656 1500 aa8.29□□□□□ -1.08
HDAC8-216ENST00000470998 C2orf72A6NCS6 295 aa8.29□□□□□ -1.08
HDAC8-216ENST00000470998 PDE4AP27815 886 aa8.29□□□□□ -1.08
HDAC8-216ENST00000470998 MBD5Q9P267 1494 aa8.29□□□□□ -1.08
HDAC8-216ENST00000470998 FGD6Q6ZV73 1430 aa8.29□□□□□ -1.08
HDAC8-216ENST00000470998 SETD1BQ9UPS6 1966 aaKnown RBP8.28□□□□□ -1.08
HDAC8-216ENST00000470998 ZMYM3Q14202 1370 aa8.28□□□□□ -1.08
HDAC8-216ENST00000470998 DHX57Q6P158 1386 aaKnown RBP8.28□□□□□ -1.08
HDAC8-216ENST00000470998 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
HDAC8-216ENST00000470998 TMEM92Q6UXU6 159 aa8.28□□□□□ -1.08
HDAC8-216ENST00000470998 MYOM3Q5VTT5 1437 aa8.28□□□□□ -1.08
HDAC8-216ENST00000470998 MIA2Q96PC5 1412 aa8.28□□□□□ -1.08
HDAC8-216ENST00000470998 PREX1Q8TCU6 1659 aa8.27□□□□□ -1.08
HDAC8-216ENST00000470998 PLXNC1O60486 1568 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 INO80Q9ULG1 1556 aaPredicted RBP8.27□□□□□ -1.09
HDAC8-216ENST00000470998 NCOA2Q15596 1464 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 DHX29Q7Z478 1369 aaKnown RBP8.27□□□□□ -1.09
HDAC8-216ENST00000470998 TSPY4P0CV99 314 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 TSPY10P0CW01 314 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 DOK7Q18PE1 504 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 ZNF710Q8N1W2 664 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 PTPRTO14522 1441 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 SETD5Q9C0A6 1442 aa8.27□□□□□ -1.09
HDAC8-216ENST00000470998 ZNF644Q9H582 1327 aaPredicted RBP8.27□□□□□ -1.09
HDAC8-216ENST00000470998 CCDC141Q6ZP82 1450 aa8.26□□□□□ -1.09
HDAC8-216ENST00000470998 SUPT6HQ7KZ85 1726 aaKnown RBP8.26□□□□□ -1.09
HDAC8-216ENST00000470998 HAP1P54257 671 aaPredicted RBP8.26□□□□□ -1.09
HDAC8-216ENST00000470998 GGT6Q6P531 493 aa8.26□□□□□ -1.09
HDAC8-216ENST00000470998 CERKQ8TCT0 537 aa8.26□□□□□ -1.09
HDAC8-216ENST00000470998 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
HDAC8-216ENST00000470998 GPHNQ9NQX3 736 aaPredicted RBP8.26□□□□□ -1.09
HDAC8-216ENST00000470998 TIMELESSQ9UNS1 1208 aa8.26□□□□□ -1.09
HDAC8-216ENST00000470998 FAM135AQ9P2D6 1515 aa8.25□□□□□ -1.09
HDAC8-216ENST00000470998 TCOF1Q13428 1488 aaKnown RBP8.25□□□□□ -1.09
HDAC8-216ENST00000470998 MROH2AA6NES4 1674 aa8.24□□□□□ -1.09
HDAC8-216ENST00000470998 HFM1A2PYH4 1435 aa8.24□□□□□ -1.09
HDAC8-216ENST00000470998 FAM163AQ96GL9 167 aaPredicted RBP8.24□□□□□ -1.09
HDAC8-216ENST00000470998 DDX27Q96GQ7 796 aaKnown RBP8.24□□□□□ -1.09
HDAC8-216ENST00000470998 WDR70Q9NW82 654 aa8.24□□□□□ -1.09
HDAC8-216ENST00000470998 CAMSAP2Q08AD1 1489 aa8.24□□□□□ -1.09
HDAC8-216ENST00000470998 C3P01024 1663 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms