RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 EID1Q9Y6B2 187 aa13.76□□□□□ -0.21
CCM2-204ENST00000470837 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
CCM2-204ENST00000470837 BCANQ96GW7 911 aa13.75□□□□□ -0.21
CCM2-204ENST00000470837 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
CCM2-204ENST00000470837 PTPRMP28827 1452 aa13.74□□□□□ -0.21
CCM2-204ENST00000470837 ADGRF5Q8IZF2 1346 aa13.74□□□□□ -0.21
CCM2-204ENST00000470837 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
CCM2-204ENST00000470837 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
CCM2-204ENST00000470837 TMEM131LA2VDJ0 1609 aa13.73□□□□□ -0.21
CCM2-204ENST00000470837 ZFYVE9O95405 1425 aa13.72□□□□□ -0.21
CCM2-204ENST00000470837 TMEM2Q9UHN6 1383 aa13.71□□□□□ -0.21
CCM2-204ENST00000470837 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
CCM2-204ENST00000470837 TXNDC2Q86VQ3 553 aa13.7□□□□□ -0.22
CCM2-204ENST00000470837 USP47Q96K76 1375 aa13.7□□□□□ -0.22
CCM2-204ENST00000470837 NEXMIFQ5QGS0 1516 aa13.69□□□□□ -0.22
CCM2-204ENST00000470837 HSPA5P11021 654 aaKnown RBP13.69□□□□□ -0.22
CCM2-204ENST00000470837 NBPF1Q3BBV0 1214 aa13.69□□□□□ -0.22
CCM2-204ENST00000470837 C14orf93Q9H972 538 aaKnown RBP13.69□□□□□ -0.22
CCM2-204ENST00000470837 PIK3C2GO75747 1445 aa13.69□□□□□ -0.22
CCM2-204ENST00000470837 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
CCM2-204ENST00000470837 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
CCM2-204ENST00000470837 KDM5AP29375 1690 aaKnown RBP13.68□□□□□ -0.22
CCM2-204ENST00000470837 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
CCM2-204ENST00000470837 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
CCM2-204ENST00000470837 MYO3AQ8NEV4 1616 aa13.67□□□□□ -0.22
CCM2-204ENST00000470837 ANKLE2Q86XL3 938 aa13.66□□□□□ -0.22
CCM2-204ENST00000470837 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
CCM2-204ENST00000470837 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
CCM2-204ENST00000470837 CEP170BQ9Y4F5 1589 aaPredicted RBP13.66□□□□□ -0.22
CCM2-204ENST00000470837 PPLO60437 1756 aa13.66□□□□□ -0.22
CCM2-204ENST00000470837 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
CCM2-204ENST00000470837 TRPM1Q7Z4N2 1603 aa13.64□□□□□ -0.23
CCM2-204ENST00000470837 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
CCM2-204ENST00000470837 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
CCM2-204ENST00000470837 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
CCM2-204ENST00000470837 PLEKHG1Q9ULL1 1385 aa13.63□□□□□ -0.23
CCM2-204ENST00000470837 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
CCM2-204ENST00000470837 SLIT1O75093 1534 aa13.63□□□□□ -0.23
CCM2-204ENST00000470837 LTKP29376 864 aa13.62□□□□□ -0.23
CCM2-204ENST00000470837 TMEM132EQ6IEE7 984 aa13.62□□□□□ -0.23
CCM2-204ENST00000470837 SETD1BQ9UPS6 1966 aaKnown RBP13.62□□□□□ -0.23
CCM2-204ENST00000470837 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
CCM2-204ENST00000470837 TRAK1Q9UPV9 953 aa13.61□□□□□ -0.23
CCM2-204ENST00000470837 ARHGAP23Q9P227 1491 aa13.61□□□□□ -0.23
CCM2-204ENST00000470837 LAMC1P11047 1609 aa13.61□□□□□ -0.23
CCM2-204ENST00000470837 MYO5BQ9ULV0 1848 aa13.6□□□□□ -0.23
CCM2-204ENST00000470837 STK26Q9P289 416 aa13.6□□□□□ -0.23
CCM2-204ENST00000470837 SETBP1Q9Y6X0 1596 aa13.6□□□□□ -0.23
CCM2-204ENST00000470837 TMF1P82094 1093 aa13.59□□□□□ -0.23
CCM2-204ENST00000470837 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
CCM2-204ENST00000470837 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
CCM2-204ENST00000470837 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
CCM2-204ENST00000470837 POGKQ9P215 609 aa13.58□□□□□ -0.24
CCM2-204ENST00000470837 CENPJQ9HC77 1338 aaPredicted RBP13.58□□□□□ -0.24
CCM2-204ENST00000470837 ALKQ9UM73 1620 aa13.57□□□□□ -0.24
CCM2-204ENST00000470837 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
CCM2-204ENST00000470837 TBX22Q9Y458 520 aa13.57□□□□□ -0.24
CCM2-204ENST00000470837 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
CCM2-204ENST00000470837 ADGRB1O14514 1584 aa13.55□□□□□ -0.24
CCM2-204ENST00000470837 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
CCM2-204ENST00000470837 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
CCM2-204ENST00000470837 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
CCM2-204ENST00000470837 METP08581 1390 aa13.53□□□□□ -0.24
CCM2-204ENST00000470837 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
CCM2-204ENST00000470837 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
CCM2-204ENST00000470837 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.25
CCM2-204ENST00000470837 PRAM1Q96QH2 718 aa13.52□□□□□ -0.25
CCM2-204ENST00000470837 CCDC7Q96M83 1385 aa13.52□□□□□ -0.25
CCM2-204ENST00000470837 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
CCM2-204ENST00000470837 DIP2AQ14689 1571 aa13.51□□□□□ -0.25
CCM2-204ENST00000470837 PIK3R4Q99570 1358 aa13.51□□□□□ -0.25
CCM2-204ENST00000470837 KIF7Q2M1P5 1343 aa13.51□□□□□ -0.25
CCM2-204ENST00000470837 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
CCM2-204ENST00000470837 HSPA2P54652 639 aa13.51□□□□□ -0.25
CCM2-204ENST00000470837 SAFB2Q14151 953 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCM2-204ENST00000470837 TESK2Q96S53 571 aa13.51□□□□□ -0.25
CCM2-204ENST00000470837 SIRT1Q96EB6 747 aa13.5□□□□□ -0.25
CCM2-204ENST00000470837 AMOTL2Q9Y2J4 779 aa13.5□□□□□ -0.25
CCM2-204ENST00000470837 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
CCM2-204ENST00000470837 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
CCM2-204ENST00000470837 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
CCM2-204ENST00000470837 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
CCM2-204ENST00000470837 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
CCM2-204ENST00000470837 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
CCM2-204ENST00000470837 DLC1Q96QB1 1528 aa13.48□□□□□ -0.25
CCM2-204ENST00000470837 MED14O60244 1454 aa13.48□□□□□ -0.25
CCM2-204ENST00000470837 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
CCM2-204ENST00000470837 FAM135BQ49AJ0 1406 aa13.47□□□□□ -0.25
CCM2-204ENST00000470837 MINK1Q8N4C8 1332 aaPredicted RBP13.46□□□□□ -0.25
CCM2-204ENST00000470837 SRPK2P78362 688 aaKnown RBP13.46□□□□□ -0.25
CCM2-204ENST00000470837 WAPLQ7Z5K2 1190 aa13.46□□□□□ -0.25
CCM2-204ENST00000470837 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
CCM2-204ENST00000470837 TECPR2O15040 1411 aa13.46□□□□□ -0.26
CCM2-204ENST00000470837 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
CCM2-204ENST00000470837 KCNA6P17658 529 aa13.44□□□□□ -0.26
CCM2-204ENST00000470837 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
CCM2-204ENST00000470837 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
CCM2-204ENST00000470837 ROBO2Q9HCK4 1378 aa13.43□□□□□ -0.26
CCM2-204ENST00000470837 POLR1AO95602 1720 aaPredicted RBP13.42□□□□□ -0.26
CCM2-204ENST00000470837 ANP32CO43423 234 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms