RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ONECUT3O60422 494 aaPredicted RBP7.91□□□□□ -1.14
PRPF3-204ENST00000470824 TATDN2Q93075 761 aa7.91□□□□□ -1.14
PRPF3-204ENST00000470824 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
PRPF3-204ENST00000470824 PNMA3Q9UL41 463 aa7.91□□□□□ -1.14
PRPF3-204ENST00000470824 DNAJB2P25686 324 aa7.9□□□□□ -1.14
PRPF3-204ENST00000470824 MYSM1Q5VVJ2 828 aa7.9□□□□□ -1.14
PRPF3-204ENST00000470824 SULF1Q8IWU6 871 aa7.9□□□□□ -1.14
PRPF3-204ENST00000470824 PROCA1Q8NCQ7 364 aaPredicted RBP7.89□□□□□ -1.15
PRPF3-204ENST00000470824 KCNK17Q96T54 332 aa7.89□□□□□ -1.15
PRPF3-204ENST00000470824 TBC1D2Q9BYX2 928 aa7.89□□□□□ -1.15
PRPF3-204ENST00000470824 CD46P15529 392 aa7.87□□□□□ -1.15
PRPF3-204ENST00000470824 CLK2P49760 499 aaKnown RBP7.87□□□□□ -1.15
PRPF3-204ENST00000470824 TMEM134Q9H6X4 195 aa7.87□□□□□ -1.15
PRPF3-204ENST00000470824 DDX11L8A8MPP1 907 aa7.86□□□□□ -1.15
PRPF3-204ENST00000470824 C3orf80F5H4A9 247 aa7.86□□□□□ -1.15
PRPF3-204ENST00000470824 PROX2Q3B8N5 592 aa7.86□□□□□ -1.15
PRPF3-204ENST00000470824 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.86□□□□□ -1.15
PRPF3-204ENST00000470824 LSM11P83369 360 aaKnown RBP eCLIP7.85□□□□□ -1.15
PRPF3-204ENST00000470824 NUTM1Q86Y26 1132 aa7.85□□□□□ -1.15
PRPF3-204ENST00000470824 SPIRE2Q8WWL2 714 aa7.85□□□□□ -1.15
PRPF3-204ENST00000470824 KIAA1468Q9P260 1216 aa7.85□□□□□ -1.15
PRPF3-204ENST00000470824 SMAPO00193 183 aa7.84□□□□□ -1.15
PRPF3-204ENST00000470824 RSPH4AQ5TD94 716 aa7.84□□□□□ -1.15
PRPF3-204ENST00000470824 RIC3Q7Z5B4 369 aa7.84□□□□□ -1.15
PRPF3-204ENST00000470824 ZBED2Q9BTP6 218 aa7.84□□□□□ -1.15
PRPF3-204ENST00000470824 ARHGAP33O14559 1287 aa7.83□□□□□ -1.16
PRPF3-204ENST00000470824 UBTFP17480 764 aaKnown RBP7.83□□□□□ -1.16
PRPF3-204ENST00000470824 HOMEZQ8IX15 550 aa7.83□□□□□ -1.16
PRPF3-204ENST00000470824 A6NJR5 290 aa7.82□□□□□ -1.16
PRPF3-204ENST00000470824 SPTLC1O15269 473 aa7.82□□□□□ -1.16
PRPF3-204ENST00000470824 PSEN2P49810 448 aa7.82□□□□□ -1.16
PRPF3-204ENST00000470824 MCM6Q14566 821 aa7.82□□□□□ -1.16
PRPF3-204ENST00000470824 TUSC1Q2TAM9 212 aa7.82□□□□□ -1.16
PRPF3-204ENST00000470824 RDH13Q8NBN7 331 aa7.82□□□□□ -1.16
PRPF3-204ENST00000470824 AXIN2Q9Y2T1 843 aa7.82□□□□□ -1.16
PRPF3-204ENST00000470824 HDGFP51858 240 aaKnown RBP7.81□□□□□ -1.16
PRPF3-204ENST00000470824 SLC4A5Q9BY07 1137 aa7.81□□□□□ -1.16
PRPF3-204ENST00000470824 LIMD1Q9UGP4 676 aa7.81□□□□□ -1.16
PRPF3-204ENST00000470824 RABGEF1Q9UJ41 708 aa7.81□□□□□ -1.16
PRPF3-204ENST00000470824 GJA5P36382 358 aa7.8□□□□□ -1.16
PRPF3-204ENST00000470824 RFC5P40937 340 aa7.8□□□□□ -1.16
PRPF3-204ENST00000470824 TMEM259Q4ZIN3 620 aa7.8□□□□□ -1.16
PRPF3-204ENST00000470824 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
PRPF3-204ENST00000470824 BANK1Q8NDB2 785 aa7.8□□□□□ -1.16
PRPF3-204ENST00000470824 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
PRPF3-204ENST00000470824 KDM4AO75164 1064 aa7.79□□□□□ -1.16
PRPF3-204ENST00000470824 PBX2P40425 430 aa7.79□□□□□ -1.16
PRPF3-204ENST00000470824 RSBN1LQ6PCB5 846 aaPredicted RBP7.79□□□□□ -1.16
PRPF3-204ENST00000470824 SPDYE5A6NIY4 337 aa7.78□□□□□ -1.16
PRPF3-204ENST00000470824 RAD21O60216 631 aa7.78□□□□□ -1.16
PRPF3-204ENST00000470824 SLC4A3P48751 1232 aa7.78□□□□□ -1.16
PRPF3-204ENST00000470824 USP46P62068 366 aa7.78□□□□□ -1.16
PRPF3-204ENST00000470824 CLUAP1Q96AJ1 413 aa7.78□□□□□ -1.16
PRPF3-204ENST00000470824 GCGRP47871 477 aa7.77□□□□□ -1.17
PRPF3-204ENST00000470824 CSPP1Q1MSJ5 1256 aa7.77□□□□□ -1.17
PRPF3-204ENST00000470824 SWT1Q5T5J6 900 aaKnown RBP7.77□□□□□ -1.17
PRPF3-204ENST00000470824 TRAK2O60296 914 aa7.76□□□□□ -1.17
PRPF3-204ENST00000470824 NDUFV2P19404 249 aa7.76□□□□□ -1.17
PRPF3-204ENST00000470824 FAM98CQ17RN3 349 aaKnown RBP7.76□□□□□ -1.17
PRPF3-204ENST00000470824 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
PRPF3-204ENST00000470824 POTEEQ6S8J3 1075 aa7.76□□□□□ -1.17
PRPF3-204ENST00000470824 SEPT9Q9UHD8 586 aaPredicted RBP7.76□□□□□ -1.17
PRPF3-204ENST00000470824 APBB1O00213 710 aa7.75□□□□□ -1.17
PRPF3-204ENST00000470824 VPS9D1Q9Y2B5 631 aa7.75□□□□□ -1.17
PRPF3-204ENST00000470824 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
PRPF3-204ENST00000470824 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
PRPF3-204ENST00000470824 LILRB3O75022 631 aa7.74□□□□□ -1.17
PRPF3-204ENST00000470824 SLC10A3P09131 477 aa7.74□□□□□ -1.17
PRPF3-204ENST00000470824 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
PRPF3-204ENST00000470824 PRPF38BQ5VTL8 546 aaKnown RBP7.74□□□□□ -1.17
PRPF3-204ENST00000470824 FBXO31Q5XUX0 539 aaPredicted RBP7.74□□□□□ -1.17
PRPF3-204ENST00000470824 LAPTM4BQ86VI4 370 aa7.74□□□□□ -1.17
PRPF3-204ENST00000470824 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
PRPF3-204ENST00000470824 SLF2Q8IX21 1173 aa7.74□□□□□ -1.17
PRPF3-204ENST00000470824 NBPF3Q9H094 633 aa7.74□□□□□ -1.17
PRPF3-204ENST00000470824 SNRKQ9NRH2 765 aa7.74□□□□□ -1.17
PRPF3-204ENST00000470824 PCDHB15Q9Y5E8 787 aa7.74□□□□□ -1.17
PRPF3-204ENST00000470824 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
PRPF3-204ENST00000470824 FDX1P10109 184 aa7.73□□□□□ -1.17
PRPF3-204ENST00000470824 QPCTQ16769 361 aa7.73□□□□□ -1.17
PRPF3-204ENST00000470824 HOXA2O43364 376 aa7.72□□□□□ -1.17
PRPF3-204ENST00000470824 ADGRD1Q6QNK2 874 aa7.72□□□□□ -1.17
PRPF3-204ENST00000470824 PROSER2Q86WR7 435 aaPredicted RBP7.72□□□□□ -1.17
PRPF3-204ENST00000470824 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
PRPF3-204ENST00000470824 C1orf115Q9H7X2 142 aa7.72□□□□□ -1.17
PRPF3-204ENST00000470824 AP1G2O75843 785 aa7.71□□□□□ -1.18
PRPF3-204ENST00000470824 GRIPAP1Q4V328 841 aa7.71□□□□□ -1.18
PRPF3-204ENST00000470824 RTL5Q5HYW3 569 aaPredicted RBP7.71□□□□□ -1.18
PRPF3-204ENST00000470824 POM121Q96HA1 1249 aa7.71□□□□□ -1.18
PRPF3-204ENST00000470824 ARID3AQ99856 593 aa7.71□□□□□ -1.18
PRPF3-204ENST00000470824 TK2O00142 265 aa7.7□□□□□ -1.18
PRPF3-204ENST00000470824 SAMD7Q7Z3H4 446 aa7.7□□□□□ -1.18
PRPF3-204ENST00000470824 CABLES1Q8TDN4 633 aa7.7□□□□□ -1.18
PRPF3-204ENST00000470824 PRM3Q9NNZ6 103 aa7.7□□□□□ -1.18
PRPF3-204ENST00000470824 PLA2G2EQ9NZK7 142 aa7.7□□□□□ -1.18
PRPF3-204ENST00000470824 COG6Q9Y2V7 657 aa7.7□□□□□ -1.18
PRPF3-204ENST00000470824 SOCS7O14512 581 aa7.69□□□□□ -1.18
PRPF3-204ENST00000470824 HRCP23327 699 aa7.69□□□□□ -1.18
PRPF3-204ENST00000470824 FNBP4Q8N3X1 1017 aaPredicted RBP7.69□□□□□ -1.18
PRPF3-204ENST00000470824 HCSTQ9UBK5 93 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms