RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 GNPATO15228 680 aa9.83□□□□□ -0.84
COL9A1-206ENST00000470652 PADI6Q6TGC4 694 aa9.83□□□□□ -0.84
COL9A1-206ENST00000470652 LCE2BO14633 110 aa9.82□□□□□ -0.84
COL9A1-206ENST00000470652 GPR37O15354 613 aa9.82□□□□□ -0.84
COL9A1-206ENST00000470652 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.82□□□□□ -0.84
COL9A1-206ENST00000470652 NKX2-3Q8TAU0 364 aa9.81□□□□□ -0.84
COL9A1-206ENST00000470652 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
COL9A1-206ENST00000470652 V9GY48 417 aaPredicted RBP9.8□□□□□ -0.84
COL9A1-206ENST00000470652 NRG2O14511 850 aaPredicted RBP9.79□□□□□ -0.84
COL9A1-206ENST00000470652 COPS2P61201 443 aa9.78□□□□□ -0.84
COL9A1-206ENST00000470652 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
COL9A1-206ENST00000470652 SLF2Q8IX21 1173 aa9.77□□□□□ -0.85
COL9A1-206ENST00000470652 ZC3H15Q8WU90 426 aaKnown RBP9.77□□□□□ -0.85
COL9A1-206ENST00000470652 FECHP22830 423 aa9.76□□□□□ -0.85
COL9A1-206ENST00000470652 OATP04181 439 aa9.75□□□□□ -0.85
COL9A1-206ENST00000470652 GGCXP38435 758 aa9.75□□□□□ -0.85
COL9A1-206ENST00000470652 SLC4A3P48751 1232 aa9.75□□□□□ -0.85
COL9A1-206ENST00000470652 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
COL9A1-206ENST00000470652 ADGRG1Q9Y653 693 aa9.75□□□□□ -0.85
COL9A1-206ENST00000470652 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
COL9A1-206ENST00000470652 ZMYND10O75800 440 aa9.73□□□□□ -0.85
COL9A1-206ENST00000470652 MAP2K5Q13163 448 aa9.73□□□□□ -0.85
COL9A1-206ENST00000470652 EYA1Q99502 592 aa9.73□□□□□ -0.85
COL9A1-206ENST00000470652 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
COL9A1-206ENST00000470652 ZPR1O75312 459 aa9.71□□□□□ -0.86
COL9A1-206ENST00000470652 FAM161AQ3B820 660 aa9.71□□□□□ -0.86
COL9A1-206ENST00000470652 BARGINQ6ZT62 677 aa9.71□□□□□ -0.86
COL9A1-206ENST00000470652 IRF6O14896 467 aa9.7□□□□□ -0.86
COL9A1-206ENST00000470652 TMUB1Q9BVT8 246 aa9.7□□□□□ -0.86
COL9A1-206ENST00000470652 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
COL9A1-206ENST00000470652 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
COL9A1-206ENST00000470652 PXYLP1Q8TE99 480 aa9.69□□□□□ -0.86
COL9A1-206ENST00000470652 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
COL9A1-206ENST00000470652 DNAJB2P25686 324 aa9.68□□□□□ -0.86
COL9A1-206ENST00000470652 ZNF787Q6DD87 383 aa9.68□□□□□ -0.86
COL9A1-206ENST00000470652 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
COL9A1-206ENST00000470652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.67□□□□□ -0.86
COL9A1-206ENST00000470652 RCCD1A6NED2 376 aa9.67□□□□□ -0.86
COL9A1-206ENST00000470652 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
COL9A1-206ENST00000470652 RNF223E7ERA6 249 aa9.64□□□□□ -0.87
COL9A1-206ENST00000470652 SLC19A1P41440 591 aa9.64□□□□□ -0.87
COL9A1-206ENST00000470652 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
COL9A1-206ENST00000470652 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
COL9A1-206ENST00000470652 PHOX2BQ99453 314 aa9.62□□□□□ -0.87
COL9A1-206ENST00000470652 TLL1O43897 1013 aa9.6□□□□□ -0.87
COL9A1-206ENST00000470652 AK7Q96M32 723 aa9.6□□□□□ -0.87
COL9A1-206ENST00000470652 PPEF1O14829 653 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-206ENST00000470652 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
COL9A1-206ENST00000470652 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
COL9A1-206ENST00000470652 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-206ENST00000470652 DAXXQ9UER7 740 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-206ENST00000470652 ACTN4O43707 911 aaKnown RBP9.58□□□□□ -0.88
COL9A1-206ENST00000470652 SPRYD7Q5W111 196 aa9.58□□□□□ -0.88
COL9A1-206ENST00000470652 S1PR4O95977 384 aa9.57□□□□□ -0.88
COL9A1-206ENST00000470652 RSPH4AQ5TD94 716 aa9.57□□□□□ -0.88
COL9A1-206ENST00000470652 SLC24A3Q9HC58 644 aa9.57□□□□□ -0.88
COL9A1-206ENST00000470652 CFHP08603 1231 aa9.56□□□□□ -0.88
COL9A1-206ENST00000470652 PKDCCQ504Y2 493 aa9.56□□□□□ -0.88
COL9A1-206ENST00000470652 ZNF598Q86UK7 904 aaKnown RBP9.56□□□□□ -0.88
COL9A1-206ENST00000470652 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
COL9A1-206ENST00000470652 ZNF775Q96BV0 537 aaPredicted RBP9.56□□□□□ -0.88
COL9A1-206ENST00000470652 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
COL9A1-206ENST00000470652 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
COL9A1-206ENST00000470652 NLRP7Q8WX94 980 aa9.55□□□□□ -0.88
COL9A1-206ENST00000470652 TRIM66O15016 1216 aa9.54□□□□□ -0.88
COL9A1-206ENST00000470652 CLCN1P35523 988 aa9.54□□□□□ -0.88
COL9A1-206ENST00000470652 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
COL9A1-206ENST00000470652 AMHR2Q16671 573 aa9.54□□□□□ -0.88
COL9A1-206ENST00000470652 TPRNQ4KMQ1 711 aa9.54□□□□□ -0.88
COL9A1-206ENST00000470652 DGAT1O75907 488 aa9.53□□□□□ -0.88
COL9A1-206ENST00000470652 SLC10A3P09131 477 aa9.53□□□□□ -0.88
COL9A1-206ENST00000470652 MYT1Q01538 1121 aa9.53□□□□□ -0.88
COL9A1-206ENST00000470652 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
COL9A1-206ENST00000470652 NR1I2O75469 434 aa9.52□□□□□ -0.89
COL9A1-206ENST00000470652 ZNF697Q5TEC3 545 aa9.52□□□□□ -0.89
COL9A1-206ENST00000470652 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
COL9A1-206ENST00000470652 PRR20EP86478 221 aa9.51□□□□□ -0.89
COL9A1-206ENST00000470652 PRR20CP86479 221 aa9.51□□□□□ -0.89
COL9A1-206ENST00000470652 PRR20DP86480 221 aa9.51□□□□□ -0.89
COL9A1-206ENST00000470652 PRR20BP86481 221 aa9.51□□□□□ -0.89
COL9A1-206ENST00000470652 PRR20AP86496 221 aa9.51□□□□□ -0.89
COL9A1-206ENST00000470652 TNFRSF10AO00220 468 aa9.5□□□□□ -0.89
COL9A1-206ENST00000470652 ADH1BP00325 375 aa9.5□□□□□ -0.89
COL9A1-206ENST00000470652 TTLL12Q14166 644 aaPredicted RBP9.5□□□□□ -0.89
COL9A1-206ENST00000470652 SLC6A16Q9GZN6 736 aa9.5□□□□□ -0.89
COL9A1-206ENST00000470652 SCUBE3Q8IX30 993 aa9.49□□□□□ -0.89
COL9A1-206ENST00000470652 RDH13Q8NBN7 331 aa9.49□□□□□ -0.89
COL9A1-206ENST00000470652 FAM187AA6NFU0 413 aa9.48□□□□□ -0.89
COL9A1-206ENST00000470652 POTECB2RU33 542 aa9.48□□□□□ -0.89
COL9A1-206ENST00000470652 GDF9O60383 454 aa9.47□□□□□ -0.89
COL9A1-206ENST00000470652 PDE4DQ08499 809 aa9.47□□□□□ -0.89
COL9A1-206ENST00000470652 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
COL9A1-206ENST00000470652 FAM217BQ9NTX9 383 aaPredicted RBP9.47□□□□□ -0.89
COL9A1-206ENST00000470652 PLA2G2CQ5R387 149 aa9.46□□□□□ -0.9
COL9A1-206ENST00000470652 PARP9Q8IXQ6 854 aa9.45□□□□□ -0.9
COL9A1-206ENST00000470652 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
COL9A1-206ENST00000470652 CD46P15529 392 aa9.44□□□□□ -0.9
COL9A1-206ENST00000470652 SSTR3P32745 418 aaPredicted RBP9.44□□□□□ -0.9
COL9A1-206ENST00000470652 GCGRP47871 477 aa9.44□□□□□ -0.9
COL9A1-206ENST00000470652 GIGYF2Q6Y7W6 1299 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms