RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
VAMP3-202ENST00000470357 DISP3Q9P2K9 1392 aa10.08□□□□□ -0.8
VAMP3-202ENST00000470357 ZMYM4Q5VZL5 1548 aa10.07□□□□□ -0.8
VAMP3-202ENST00000470357 ITSN2Q9NZM3 1697 aa10.07□□□□□ -0.8
VAMP3-202ENST00000470357 NCOA2Q15596 1464 aa10.07□□□□□ -0.8
VAMP3-202ENST00000470357 POGZQ7Z3K3 1410 aa10.07□□□□□ -0.8
VAMP3-202ENST00000470357 FANCAO15360 1455 aa10.06□□□□□ -0.8
VAMP3-202ENST00000470357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.06□□□□□ -0.8
VAMP3-202ENST00000470357 RRBP1Q9P2E9 1410 aaKnown RBP10.06□□□□□ -0.8
VAMP3-202ENST00000470357 TTC37Q6PGP7 1564 aa10.05□□□□□ -0.8
VAMP3-202ENST00000470357 MAGI2Q86UL8 1455 aa10.05□□□□□ -0.8
VAMP3-202ENST00000470357 MLECQ14165 292 aa10.05□□□□□ -0.8
VAMP3-202ENST00000470357 ZFYVE16Q7Z3T8 1539 aa10.04□□□□□ -0.8
VAMP3-202ENST00000470357 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
VAMP3-202ENST00000470357 MYOM3Q5VTT5 1437 aa10.04□□□□□ -0.8
VAMP3-202ENST00000470357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.03□□□□□ -0.8
VAMP3-202ENST00000470357 ARHGEF12Q9NZN5 1544 aa10.03□□□□□ -0.8
VAMP3-202ENST00000470357 CEBPAP49715 358 aaPredicted RBP10.03□□□□□ -0.8
VAMP3-202ENST00000470357 MIA2Q96PC5 1412 aa10.03□□□□□ -0.8
VAMP3-202ENST00000470357 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
VAMP3-202ENST00000470357 CCNB3Q8WWL7 1395 aa10.02□□□□□ -0.8
VAMP3-202ENST00000470357 PCGF6Q9BYE7 350 aa10.02□□□□□ -0.81
VAMP3-202ENST00000470357 FGD6Q6ZV73 1430 aa10.01□□□□□ -0.81
VAMP3-202ENST00000470357 MYO5CQ9NQX4 1742 aa10.01□□□□□ -0.81
VAMP3-202ENST00000470357 FER1L4A9Z1Z3 1794 aa10.01□□□□□ -0.81
VAMP3-202ENST00000470357 CFAP74Q9C0B2 1584 aa10.01□□□□□ -0.81
VAMP3-202ENST00000470357 SCAPERQ9BY12 1400 aa10□□□□□ -0.81
VAMP3-202ENST00000470357 ATP10AO60312 1499 aa10□□□□□ -0.81
VAMP3-202ENST00000470357 CDC42BPAQ5VT25 1732 aa10□□□□□ -0.81
VAMP3-202ENST00000470357 PTPN23Q9H3S7 1636 aa10□□□□□ -0.81
VAMP3-202ENST00000470357 PLCH2O75038 1416 aa9.99□□□□□ -0.81
VAMP3-202ENST00000470357 PREX1Q8TCU6 1659 aa9.99□□□□□ -0.81
VAMP3-202ENST00000470357 PREX2Q70Z35 1606 aa9.98□□□□□ -0.81
VAMP3-202ENST00000470357 PTPRTO14522 1441 aa9.98□□□□□ -0.81
VAMP3-202ENST00000470357 C9orf84Q5VXU9 1444 aa9.98□□□□□ -0.81
VAMP3-202ENST00000470357 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
VAMP3-202ENST00000470357 LTBP4Q8N2S1 1624 aa9.97□□□□□ -0.81
VAMP3-202ENST00000470357 GPATCH8Q9UKJ3 1502 aaKnown RBP9.97□□□□□ -0.81
VAMP3-202ENST00000470357 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
VAMP3-202ENST00000470357 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.82
VAMP3-202ENST00000470357 SPATA31D1Q6ZQQ2 1576 aa9.96□□□□□ -0.82
VAMP3-202ENST00000470357 TMC2Q8TDI7 906 aa9.95□□□□□ -0.82
VAMP3-202ENST00000470357 CFDP1Q9UEE9 299 aaPredicted RBP9.95□□□□□ -0.82
VAMP3-202ENST00000470357 CDC42BPBQ9Y5S2 1711 aa9.95□□□□□ -0.82
VAMP3-202ENST00000470357 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
VAMP3-202ENST00000470357 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
VAMP3-202ENST00000470357 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
VAMP3-202ENST00000470357 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
VAMP3-202ENST00000470357 AFAP1Q8N556 730 aa9.94□□□□□ -0.82
VAMP3-202ENST00000470357 PLEKHH2Q8IVE3 1493 aa9.93□□□□□ -0.82
VAMP3-202ENST00000470357 KIF3CO14782 793 aa9.93□□□□□ -0.82
VAMP3-202ENST00000470357 FAM163AQ96GL9 167 aaPredicted RBP9.93□□□□□ -0.82
VAMP3-202ENST00000470357 ARHGAP5Q13017 1502 aa9.92□□□□□ -0.82
VAMP3-202ENST00000470357 IQSEC2Q5JU85 1478 aa9.92□□□□□ -0.82
VAMP3-202ENST00000470357 DNMT1P26358 1616 aaKnown RBP9.92□□□□□ -0.82
VAMP3-202ENST00000470357 KDM5CP41229 1560 aa9.92□□□□□ -0.82
VAMP3-202ENST00000470357 CAMSAP2Q08AD1 1489 aa9.91□□□□□ -0.82
VAMP3-202ENST00000470357 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
VAMP3-202ENST00000470357 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
VAMP3-202ENST00000470357 NCOA1Q15788 1441 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 NCKAP5LQ9HCH0 1330 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 ARHGEF5Q12774 1597 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 REREQ9P2R6 1566 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 SNPHO15079 494 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 PDE4AP27815 886 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 RSPH4AQ5TD94 716 aa9.9□□□□□ -0.82
VAMP3-202ENST00000470357 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.83
VAMP3-202ENST00000470357 DIP2CQ9Y2E4 1556 aa9.89□□□□□ -0.83
VAMP3-202ENST00000470357 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
VAMP3-202ENST00000470357 TSHZ2Q9NRE2 1034 aa9.89□□□□□ -0.83
VAMP3-202ENST00000470357 C3P01024 1663 aa9.89□□□□□ -0.83
VAMP3-202ENST00000470357 ADGBQ8N7X0 1667 aa9.89□□□□□ -0.83
VAMP3-202ENST00000470357 SAMD9LQ8IVG5 1584 aa9.88□□□□□ -0.83
VAMP3-202ENST00000470357 ACIN1Q9UKV3 1341 aaKnown RBP9.88□□□□□ -0.83
VAMP3-202ENST00000470357 AGLP35573 1532 aa9.88□□□□□ -0.83
VAMP3-202ENST00000470357 MLH3Q9UHC1 1453 aa9.88□□□□□ -0.83
VAMP3-202ENST00000470357 DAPK1P53355 1430 aa9.88□□□□□ -0.83
VAMP3-202ENST00000470357 KIAA1107Q9UPP5 1409 aa9.88□□□□□ -0.83
VAMP3-202ENST00000470357 SHANK2Q9UPX8 1470 aa9.87□□□□□ -0.83
VAMP3-202ENST00000470357 HOXB3P14651 431 aaPredicted RBP9.87□□□□□ -0.83
VAMP3-202ENST00000470357 DSG2Q14126 1118 aa9.87□□□□□ -0.83
VAMP3-202ENST00000470357 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
VAMP3-202ENST00000470357 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
VAMP3-202ENST00000470357 GCC2Q8IWJ2 1684 aa9.87□□□□□ -0.83
VAMP3-202ENST00000470357 ITGAEP38570 1179 aa9.86□□□□□ -0.83
VAMP3-202ENST00000470357 ABCC1P33527 1531 aa9.86□□□□□ -0.83
VAMP3-202ENST00000470357 ROCK1Q13464 1354 aa9.86□□□□□ -0.83
VAMP3-202ENST00000470357 ABCA6Q8N139 1617 aa9.85□□□□□ -0.83
VAMP3-202ENST00000470357 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
VAMP3-202ENST00000470357 ZNF335Q9H4Z2 1342 aaPredicted RBP9.85□□□□□ -0.83
VAMP3-202ENST00000470357 FOXK1P85037 733 aa9.85□□□□□ -0.83
VAMP3-202ENST00000470357 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
VAMP3-202ENST00000470357 ABCC5O15440 1437 aa9.84□□□□□ -0.83
VAMP3-202ENST00000470357 SYCP2Q9BX26 1530 aa9.84□□□□□ -0.83
VAMP3-202ENST00000470357 ST18O60284 1047 aa9.84□□□□□ -0.83
VAMP3-202ENST00000470357 HRCP23327 699 aa9.84□□□□□ -0.83
VAMP3-202ENST00000470357 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
VAMP3-202ENST00000470357 MAST1Q9Y2H9 1570 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms