RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CFDP1Q9UEE9 299 aaPredicted RBP12.12□□□□□ -0.47
NHLRC3-203ENST00000470258 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
NHLRC3-203ENST00000470258 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
NHLRC3-203ENST00000470258 MFAP1P55081 439 aaKnown RBP12.12□□□□□ -0.47
NHLRC3-203ENST00000470258 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
NHLRC3-203ENST00000470258 TBC1D32Q96NH3 1257 aa12.11□□□□□ -0.47
NHLRC3-203ENST00000470258 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
NHLRC3-203ENST00000470258 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
NHLRC3-203ENST00000470258 PDCL3Q9H2J4 239 aa12.11□□□□□ -0.47
NHLRC3-203ENST00000470258 PLEKHH2Q8IVE3 1493 aa12.1□□□□□ -0.47
NHLRC3-203ENST00000470258 APAF1O14727 1248 aa12.1□□□□□ -0.47
NHLRC3-203ENST00000470258 TPM2P07951 284 aa12.1□□□□□ -0.47
NHLRC3-203ENST00000470258 ABCA8O94911 1581 aa12.1□□□□□ -0.47
NHLRC3-203ENST00000470258 UHRF1BP1LA0JNW5 1464 aa12.09□□□□□ -0.47
NHLRC3-203ENST00000470258 EIF3AQ14152 1382 aaKnown RBP12.09□□□□□ -0.47
NHLRC3-203ENST00000470258 FAM13BQ9NYF5 915 aa12.09□□□□□ -0.47
NHLRC3-203ENST00000470258 KNSTRNQ9Y448 316 aa12.09□□□□□ -0.47
NHLRC3-203ENST00000470258 DISP3Q9P2K9 1392 aa12.08□□□□□ -0.48
NHLRC3-203ENST00000470258 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
NHLRC3-203ENST00000470258 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
NHLRC3-203ENST00000470258 UHRF1BP1Q6BDS2 1440 aa12.08□□□□□ -0.48
NHLRC3-203ENST00000470258 PPP2R1AP30153 589 aa12.08□□□□□ -0.48
NHLRC3-203ENST00000470258 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
NHLRC3-203ENST00000470258 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
NHLRC3-203ENST00000470258 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
NHLRC3-203ENST00000470258 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
NHLRC3-203ENST00000470258 PTPRGP23470 1445 aa12.07□□□□□ -0.48
NHLRC3-203ENST00000470258 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
NHLRC3-203ENST00000470258 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
NHLRC3-203ENST00000470258 GAS2L3Q86XJ1 694 aa12.06□□□□□ -0.48
NHLRC3-203ENST00000470258 C22orf23Q9BZE7 217 aa12.06□□□□□ -0.48
NHLRC3-203ENST00000470258 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
NHLRC3-203ENST00000470258 TMF1P82094 1093 aa12.06□□□□□ -0.48
NHLRC3-203ENST00000470258 CENPJQ9HC77 1338 aaPredicted RBP12.06□□□□□ -0.48
NHLRC3-203ENST00000470258 RAPGEF6Q8TEU7 1601 aa12.05□□□□□ -0.48
NHLRC3-203ENST00000470258 DNMT1P26358 1616 aaKnown RBP12.05□□□□□ -0.48
NHLRC3-203ENST00000470258 ZCCHC11Q5TAX3 1644 aaKnown RBP12.05□□□□□ -0.48
NHLRC3-203ENST00000470258 MSNP26038 577 aaKnown RBP12.05□□□□□ -0.48
NHLRC3-203ENST00000470258 ANP32BQ92688 251 aaKnown RBP12.05□□□□□ -0.48
NHLRC3-203ENST00000470258 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
NHLRC3-203ENST00000470258 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
NHLRC3-203ENST00000470258 ZNF521Q96K83 1311 aa12.04□□□□□ -0.48
NHLRC3-203ENST00000470258 ANKRD50Q9ULJ7 1429 aa12.04□□□□□ -0.48
NHLRC3-203ENST00000470258 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
NHLRC3-203ENST00000470258 R3HCC1Q9Y3T6 440 aaKnown RBP12.03□□□□□ -0.48
NHLRC3-203ENST00000470258 E9PCH4 1651 aa12.03□□□□□ -0.48
NHLRC3-203ENST00000470258 NKTRP30414 1462 aaKnown RBP12.03□□□□□ -0.48
NHLRC3-203ENST00000470258 TNNQ9UQP3 1299 aa12.03□□□□□ -0.48
NHLRC3-203ENST00000470258 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
NHLRC3-203ENST00000470258 E9PSI1 815 aa12.03□□□□□ -0.48
NHLRC3-203ENST00000470258 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
NHLRC3-203ENST00000470258 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.48
NHLRC3-203ENST00000470258 CALD1Q05682 793 aaKnown RBP12.02□□□□□ -0.48
NHLRC3-203ENST00000470258 PDE3AQ14432 1141 aa12.02□□□□□ -0.48
NHLRC3-203ENST00000470258 PLB1Q6P1J6 1458 aa12.02□□□□□ -0.49
NHLRC3-203ENST00000470258 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
NHLRC3-203ENST00000470258 TESK2Q96S53 571 aa12.01□□□□□ -0.49
NHLRC3-203ENST00000470258 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
NHLRC3-203ENST00000470258 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
NHLRC3-203ENST00000470258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.49
NHLRC3-203ENST00000470258 PRDM10Q9NQV6 1147 aa12.01□□□□□ -0.49
NHLRC3-203ENST00000470258 CAMSAP2Q08AD1 1489 aa12□□□□□ -0.49
NHLRC3-203ENST00000470258 INSRP06213 1382 aa12□□□□□ -0.49
NHLRC3-203ENST00000470258 ZBTB7CA1YPR0 619 aa12□□□□□ -0.49
NHLRC3-203ENST00000470258 GBP4Q96PP9 640 aa12□□□□□ -0.49
NHLRC3-203ENST00000470258 RRP7AQ9Y3A4 280 aaKnown RBP12□□□□□ -0.49
NHLRC3-203ENST00000470258 ERBINQ96RT1 1412 aa12□□□□□ -0.49
NHLRC3-203ENST00000470258 ZSCAN30Q86W11 494 aa11.99□□□□□ -0.49
NHLRC3-203ENST00000470258 NCLP19338 710 aaKnown RBP11.99□□□□□ -0.49
NHLRC3-203ENST00000470258 RWDD1Q9H446 243 aaPredicted RBP11.99□□□□□ -0.49
NHLRC3-203ENST00000470258 ISY1Q9ULR0 285 aaKnown RBP11.99□□□□□ -0.49
NHLRC3-203ENST00000470258 RLBP1P12271 317 aa11.99□□□□□ -0.49
NHLRC3-203ENST00000470258 RIPK4P57078 832 aa11.99□□□□□ -0.49
NHLRC3-203ENST00000470258 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 PRDM4Q9UKN5 801 aa11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 ZHX1Q9UKY1 873 aaPredicted RBP11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 COL17A1Q9UMD9 1497 aaPredicted RBP11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 VIRMAQ69YN4 1812 aaKnown RBP11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 TSPY4P0CV99 314 aa11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 TSPY10P0CW01 314 aa11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 CCDC173Q0VFZ6 552 aa11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 TRMT2AQ8IZ69 625 aaKnown RBP11.98□□□□□ -0.49
NHLRC3-203ENST00000470258 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
NHLRC3-203ENST00000470258 OFD1O75665 1012 aa11.97□□□□□ -0.49
NHLRC3-203ENST00000470258 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.49
NHLRC3-203ENST00000470258 XPCQ01831 940 aaPredicted RBP11.96□□□□□ -0.49
NHLRC3-203ENST00000470258 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.5
NHLRC3-203ENST00000470258 UQCRHLA0A096LP55 91 aa11.96□□□□□ -0.5
NHLRC3-203ENST00000470258 UQCRHP07919 91 aa11.96□□□□□ -0.5
NHLRC3-203ENST00000470258 DDX49Q9Y6V7 483 aaKnown RBP11.96□□□□□ -0.5
NHLRC3-203ENST00000470258 CCDC144AA2RUR9 1427 aa11.95□□□□□ -0.5
NHLRC3-203ENST00000470258 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
NHLRC3-203ENST00000470258 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
NHLRC3-203ENST00000470258 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
NHLRC3-203ENST00000470258 SKOR2Q2VWA4 1001 aaPredicted RBP11.94□□□□□ -0.5
NHLRC3-203ENST00000470258 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
NHLRC3-203ENST00000470258 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
NHLRC3-203ENST00000470258 GLI2P10070 1586 aa11.93□□□□□ -0.5
NHLRC3-203ENST00000470258 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms