RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 SPHKAPQ2M3C7 1700 aa13.97□□□□□ -0.17
SEMA4D-215ENST00000469653 PKNOX2Q96KN3 472 aa13.96□□□□□ -0.17
SEMA4D-215ENST00000469653 ERVK-7P63135 1459 aa13.95□□□□□ -0.18
SEMA4D-215ENST00000469653 SPATA31D1Q6ZQQ2 1576 aa13.94□□□□□ -0.18
SEMA4D-215ENST00000469653 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
SEMA4D-215ENST00000469653 PTPRTO14522 1441 aa13.93□□□□□ -0.18
SEMA4D-215ENST00000469653 NOS1P29475 1434 aa13.93□□□□□ -0.18
SEMA4D-215ENST00000469653 SYNMO15061 1565 aa13.93□□□□□ -0.18
SEMA4D-215ENST00000469653 PLA2R1Q13018 1463 aa13.93□□□□□ -0.18
SEMA4D-215ENST00000469653 ANKRD30BQ9BXX2 1392 aa13.92□□□□□ -0.18
SEMA4D-215ENST00000469653 TRPM2O94759 1503 aa13.91□□□□□ -0.18
SEMA4D-215ENST00000469653 TNRQ92752 1358 aa13.91□□□□□ -0.18
SEMA4D-215ENST00000469653 UGGT1Q9NYU2 1555 aa13.91□□□□□ -0.18
SEMA4D-215ENST00000469653 SETD1BQ9UPS6 1966 aaKnown RBP13.91□□□□□ -0.18
SEMA4D-215ENST00000469653 UBE2Q2Q8WVN8 375 aa13.9□□□□□ -0.18
SEMA4D-215ENST00000469653 CLTCL1P53675 1640 aa13.89□□□□□ -0.19
SEMA4D-215ENST00000469653 PIK3C2BO00750 1634 aa13.88□□□□□ -0.19
SEMA4D-215ENST00000469653 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
SEMA4D-215ENST00000469653 CCDC144AA2RUR9 1427 aa13.88□□□□□ -0.19
SEMA4D-215ENST00000469653 IDI1Q13907 227 aa13.87□□□□□ -0.19
SEMA4D-215ENST00000469653 MYO3AQ8NEV4 1616 aa13.87□□□□□ -0.19
SEMA4D-215ENST00000469653 SLC52A1Q9NWF4 448 aa13.87□□□□□ -0.19
SEMA4D-215ENST00000469653 SIN3AQ96ST3 1273 aa13.86□□□□□ -0.19
SEMA4D-215ENST00000469653 KIF1BO60333 1816 aa13.86□□□□□ -0.19
SEMA4D-215ENST00000469653 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
SEMA4D-215ENST00000469653 MYO5BQ9ULV0 1848 aa13.85□□□□□ -0.19
SEMA4D-215ENST00000469653 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
SEMA4D-215ENST00000469653 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
SEMA4D-215ENST00000469653 RBM19Q9Y4C8 960 aaKnown RBP13.83□□□□□ -0.2
SEMA4D-215ENST00000469653 UHRF1BP1Q6BDS2 1440 aa13.83□□□□□ -0.2
SEMA4D-215ENST00000469653 CEP170BQ9Y4F5 1589 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 PPP1R15AO75807 674 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 ZNF142P52746 1687 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 TMEM131LA2VDJ0 1609 aa13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 NEFLP07196 543 aa13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 BCL11BQ9C0K0 894 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 A2ML1A8K2U0 1454 aa13.82□□□□□ -0.2
SEMA4D-215ENST00000469653 ADGRB3O60242 1522 aa13.81□□□□□ -0.2
SEMA4D-215ENST00000469653 CCDC136Q96JN2 1154 aa13.8□□□□□ -0.2
SEMA4D-215ENST00000469653 KDM5AP29375 1690 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-215ENST00000469653 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
SEMA4D-215ENST00000469653 ZNF326Q5BKZ1 582 aaKnown RBP13.79□□□□□ -0.2
SEMA4D-215ENST00000469653 SPATA31E1Q6ZUB1 1445 aa13.79□□□□□ -0.2
SEMA4D-215ENST00000469653 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
SEMA4D-215ENST00000469653 A0A0U1RQG5 324 aaPredicted RBP13.77□□□□□ -0.21
SEMA4D-215ENST00000469653 NEURL4Q96JN8 1562 aa13.76□□□□□ -0.21
SEMA4D-215ENST00000469653 LMTK3Q96Q04 1460 aa13.76□□□□□ -0.21
SEMA4D-215ENST00000469653 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
SEMA4D-215ENST00000469653 PPLO60437 1756 aa13.74□□□□□ -0.21
SEMA4D-215ENST00000469653 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
SEMA4D-215ENST00000469653 TMEM2Q9UHN6 1383 aa13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 HSPA2P54652 639 aa13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 L3MBTL2Q969R5 705 aa13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 DCAF11Q8TEB1 546 aa13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
SEMA4D-215ENST00000469653 MSH5O43196 834 aa13.72□□□□□ -0.21
SEMA4D-215ENST00000469653 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
SEMA4D-215ENST00000469653 SLIT1O75093 1534 aa13.72□□□□□ -0.21
SEMA4D-215ENST00000469653 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
SEMA4D-215ENST00000469653 KDM2AQ9Y2K7 1162 aa13.72□□□□□ -0.21
SEMA4D-215ENST00000469653 ZFYVE9O95405 1425 aa13.71□□□□□ -0.21
SEMA4D-215ENST00000469653 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.21
SEMA4D-215ENST00000469653 LTKP29376 864 aa13.7□□□□□ -0.22
SEMA4D-215ENST00000469653 TXNDC2Q86VQ3 553 aa13.7□□□□□ -0.22
SEMA4D-215ENST00000469653 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
SEMA4D-215ENST00000469653 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
SEMA4D-215ENST00000469653 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEMA4D-215ENST00000469653 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
SEMA4D-215ENST00000469653 POLR1AO95602 1720 aaPredicted RBP13.69□□□□□ -0.22
SEMA4D-215ENST00000469653 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
SEMA4D-215ENST00000469653 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-215ENST00000469653 ANP32CO43423 234 aa13.68□□□□□ -0.22
SEMA4D-215ENST00000469653 SCAF11Q99590 1463 aaKnown RBP13.68□□□□□ -0.22
SEMA4D-215ENST00000469653 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
SEMA4D-215ENST00000469653 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
SEMA4D-215ENST00000469653 ADGRF5Q8IZF2 1346 aa13.67□□□□□ -0.22
SEMA4D-215ENST00000469653 MYOM2P54296 1465 aa13.66□□□□□ -0.22
SEMA4D-215ENST00000469653 STRCQ7RTU9 1775 aa13.66□□□□□ -0.22
SEMA4D-215ENST00000469653 NBR1Q14596 966 aa13.66□□□□□ -0.22
SEMA4D-215ENST00000469653 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
SEMA4D-215ENST00000469653 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
SEMA4D-215ENST00000469653 PLEKHG1Q9ULL1 1385 aa13.63□□□□□ -0.23
SEMA4D-215ENST00000469653 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
SEMA4D-215ENST00000469653 PRAG1Q86YV5 1406 aa13.62□□□□□ -0.23
SEMA4D-215ENST00000469653 PIK3C2GO75747 1445 aa13.62□□□□□ -0.23
SEMA4D-215ENST00000469653 NRXN3Q9Y4C0 1643 aa13.62□□□□□ -0.23
SEMA4D-215ENST00000469653 MED14O60244 1454 aa13.62□□□□□ -0.23
SEMA4D-215ENST00000469653 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-215ENST00000469653 NBPF8Q3BBV2 869 aa13.61□□□□□ -0.23
SEMA4D-215ENST00000469653 SETBP1Q9Y6X0 1596 aa13.61□□□□□ -0.23
SEMA4D-215ENST00000469653 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
SEMA4D-215ENST00000469653 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
SEMA4D-215ENST00000469653 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
SEMA4D-215ENST00000469653 CFAP70Q5T0N1 1121 aa13.59□□□□□ -0.23
SEMA4D-215ENST00000469653 ADAMTS13Q76LX8 1427 aa13.58□□□□□ -0.24
SEMA4D-215ENST00000469653 TRPM1Q7Z4N2 1603 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms