RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
TRAF4-208ENST00000469529 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
TRAF4-208ENST00000469529 CEP170BQ9Y4F5 1589 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-208ENST00000469529 CHGAP10645 457 aaKnown RBP18.09■□□□□ 0.49
TRAF4-208ENST00000469529 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
TRAF4-208ENST00000469529 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
TRAF4-208ENST00000469529 A2ML1A8K2U0 1454 aa18.08■□□□□ 0.49
TRAF4-208ENST00000469529 KIF1BO60333 1816 aa18.08■□□□□ 0.48
TRAF4-208ENST00000469529 FBXO41Q8TF61 875 aa18.08■□□□□ 0.48
TRAF4-208ENST00000469529 TMEM131LA2VDJ0 1609 aa18.08■□□□□ 0.48
TRAF4-208ENST00000469529 RALGAPBQ86X10 1494 aa18.07■□□□□ 0.48
TRAF4-208ENST00000469529 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRAF4-208ENST00000469529 STAG3Q9UJ98 1225 aa18.06■□□□□ 0.48
TRAF4-208ENST00000469529 KDM5AP29375 1690 aaKnown RBP18.06■□□□□ 0.48
TRAF4-208ENST00000469529 ADGRF5Q8IZF2 1346 aa18.05■□□□□ 0.48
TRAF4-208ENST00000469529 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
TRAF4-208ENST00000469529 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
TRAF4-208ENST00000469529 C14orf93Q9H972 538 aaKnown RBP18.05■□□□□ 0.48
TRAF4-208ENST00000469529 CFAP65Q6ZU64 1925 aaKnown RBP18.05■□□□□ 0.48
TRAF4-208ENST00000469529 NCKAP5LQ9HCH0 1330 aa18.04■□□□□ 0.48
TRAF4-208ENST00000469529 THEMISQ8N1K5 641 aaPredicted RBP18.03■□□□□ 0.48
TRAF4-208ENST00000469529 NEXMIFQ5QGS0 1516 aa18.02■□□□□ 0.47
TRAF4-208ENST00000469529 TMEM2Q9UHN6 1383 aa18.02■□□□□ 0.47
TRAF4-208ENST00000469529 PIK3C2GO75747 1445 aa18.01■□□□□ 0.47
TRAF4-208ENST00000469529 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
TRAF4-208ENST00000469529 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
TRAF4-208ENST00000469529 ROCK2O75116 1388 aaKnown RBP18■□□□□ 0.47
TRAF4-208ENST00000469529 RIMS2Q9UQ26 1411 aa17.98■□□□□ 0.47
TRAF4-208ENST00000469529 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
TRAF4-208ENST00000469529 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
TRAF4-208ENST00000469529 ARHGAP23Q9P227 1491 aa17.97■□□□□ 0.47
TRAF4-208ENST00000469529 CFAP70Q5T0N1 1121 aa17.97■□□□□ 0.47
TRAF4-208ENST00000469529 PPLO60437 1756 aa17.96■□□□□ 0.47
TRAF4-208ENST00000469529 KIAA1210Q9ULL0 1709 aa17.96■□□□□ 0.47
TRAF4-208ENST00000469529 TRPM1Q7Z4N2 1603 aa17.96■□□□□ 0.47
TRAF4-208ENST00000469529 SLIT1O75093 1534 aa17.95■□□□□ 0.46
TRAF4-208ENST00000469529 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
TRAF4-208ENST00000469529 LAMC1P11047 1609 aa17.94■□□□□ 0.46
TRAF4-208ENST00000469529 USP47Q96K76 1375 aa17.94■□□□□ 0.46
TRAF4-208ENST00000469529 EID1Q9Y6B2 187 aa17.93■□□□□ 0.46
TRAF4-208ENST00000469529 UBR1Q8IWV7 1749 aa17.92■□□□□ 0.46
TRAF4-208ENST00000469529 SETBP1Q9Y6X0 1596 aa17.92■□□□□ 0.46
TRAF4-208ENST00000469529 LTBP4Q8N2S1 1624 aa17.92■□□□□ 0.46
TRAF4-208ENST00000469529 ANKLE2Q86XL3 938 aa17.92■□□□□ 0.46
TRAF4-208ENST00000469529 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
TRAF4-208ENST00000469529 LTKP29376 864 aa17.91■□□□□ 0.46
TRAF4-208ENST00000469529 TXNDC2Q86VQ3 553 aa17.91■□□□□ 0.46
TRAF4-208ENST00000469529 POLR1AO95602 1720 aaPredicted RBP17.91■□□□□ 0.46
TRAF4-208ENST00000469529 NUTM2DQ5VT03 806 aaPredicted RBP17.9■□□□□ 0.46
TRAF4-208ENST00000469529 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
TRAF4-208ENST00000469529 PLEKHG1Q9ULL1 1385 aa17.9■□□□□ 0.46
TRAF4-208ENST00000469529 ST20-MTHFSA0A0A6YYL1 179 aa17.89■□□□□ 0.45
TRAF4-208ENST00000469529 ADGRB1O14514 1584 aa17.88■□□□□ 0.45
TRAF4-208ENST00000469529 SIRT1Q96EB6 747 aa17.87■□□□□ 0.45
TRAF4-208ENST00000469529 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
TRAF4-208ENST00000469529 TESK2Q96S53 571 aa17.86■□□□□ 0.45
TRAF4-208ENST00000469529 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
TRAF4-208ENST00000469529 MED14O60244 1454 aa17.85■□□□□ 0.45
TRAF4-208ENST00000469529 NPHP4O75161 1426 aaPredicted RBP17.85■□□□□ 0.45
TRAF4-208ENST00000469529 EIF3AQ14152 1382 aaKnown RBP17.85■□□□□ 0.45
TRAF4-208ENST00000469529 IQSEC2Q5JU85 1478 aa17.84■□□□□ 0.45
TRAF4-208ENST00000469529 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
TRAF4-208ENST00000469529 ALKQ9UM73 1620 aa17.83■□□□□ 0.45
TRAF4-208ENST00000469529 ABCC11Q96J66 1382 aa17.83■□□□□ 0.45
TRAF4-208ENST00000469529 SBNO2Q9Y2G9 1366 aa17.83■□□□□ 0.45
TRAF4-208ENST00000469529 TMEM132EQ6IEE7 984 aa17.83■□□□□ 0.44
TRAF4-208ENST00000469529 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
TRAF4-208ENST00000469529 LRPPRCP42704 1394 aaKnown RBP17.81■□□□□ 0.44
TRAF4-208ENST00000469529 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
TRAF4-208ENST00000469529 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
TRAF4-208ENST00000469529 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
TRAF4-208ENST00000469529 IQGAP1P46940 1657 aa17.8■□□□□ 0.44
TRAF4-208ENST00000469529 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
TRAF4-208ENST00000469529 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
TRAF4-208ENST00000469529 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
TRAF4-208ENST00000469529 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
TRAF4-208ENST00000469529 METP08581 1390 aa17.78■□□□□ 0.44
TRAF4-208ENST00000469529 CENPJQ9HC77 1338 aaPredicted RBP17.77■□□□□ 0.44
TRAF4-208ENST00000469529 TMF1P82094 1093 aa17.77■□□□□ 0.44
TRAF4-208ENST00000469529 TRAK1Q9UPV9 953 aa17.77■□□□□ 0.44
TRAF4-208ENST00000469529 TECPR2O15040 1411 aa17.77■□□□□ 0.44
TRAF4-208ENST00000469529 CPS1P31327 1500 aa17.77■□□□□ 0.43
TRAF4-208ENST00000469529 NRXN3Q9Y4C0 1643 aa17.76■□□□□ 0.43
TRAF4-208ENST00000469529 KIF7Q2M1P5 1343 aa17.76■□□□□ 0.43
TRAF4-208ENST00000469529 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
TRAF4-208ENST00000469529 ASXL1Q8IXJ9 1541 aa17.76■□□□□ 0.43
TRAF4-208ENST00000469529 DLC1Q96QB1 1528 aa17.76■□□□□ 0.43
TRAF4-208ENST00000469529 FAM135BQ49AJ0 1406 aa17.74■□□□□ 0.43
TRAF4-208ENST00000469529 BCANQ96GW7 911 aa17.74■□□□□ 0.43
TRAF4-208ENST00000469529 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
TRAF4-208ENST00000469529 UBAP1LF5GYI3 381 aa17.73■□□□□ 0.43
TRAF4-208ENST00000469529 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
TRAF4-208ENST00000469529 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
TRAF4-208ENST00000469529 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
TRAF4-208ENST00000469529 STK26Q9P289 416 aa17.7■□□□□ 0.42
TRAF4-208ENST00000469529 PRAM1Q96QH2 718 aa17.69■□□□□ 0.42
TRAF4-208ENST00000469529 POGKQ9P215 609 aa17.68■□□□□ 0.42
TRAF4-208ENST00000469529 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
TRAF4-208ENST00000469529 DISP3Q9P2K9 1392 aa17.67■□□□□ 0.42
TRAF4-208ENST00000469529 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms