RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.34
SYN3-210ENST00000468922 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.34
SYN3-210ENST00000468922 LMTK2Q8IWU2 1503 aa12.94□□□□□ -0.34
SYN3-210ENST00000468922 BCANQ96GW7 911 aa12.94□□□□□ -0.34
SYN3-210ENST00000468922 KANK1Q14678 1352 aa12.93□□□□□ -0.34
SYN3-210ENST00000468922 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
SYN3-210ENST00000468922 LRP6O75581 1613 aa12.91□□□□□ -0.34
SYN3-210ENST00000468922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.34
SYN3-210ENST00000468922 IDI1Q13907 227 aa12.9□□□□□ -0.34
SYN3-210ENST00000468922 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
SYN3-210ENST00000468922 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
SYN3-210ENST00000468922 NUTM2BA6NNL0 878 aaPredicted RBP12.89□□□□□ -0.35
SYN3-210ENST00000468922 NUTM2EB1AL46 878 aaPredicted RBP12.89□□□□□ -0.35
SYN3-210ENST00000468922 FOXD1Q16676 465 aa12.89□□□□□ -0.35
SYN3-210ENST00000468922 NUTM2AQ8IVF1 878 aaPredicted RBP12.89□□□□□ -0.35
SYN3-210ENST00000468922 CFAP65Q6ZU64 1925 aaKnown RBP12.89□□□□□ -0.35
SYN3-210ENST00000468922 UNC13BO14795 1591 aa12.89□□□□□ -0.35
SYN3-210ENST00000468922 ITGAEP38570 1179 aa12.88□□□□□ -0.35
SYN3-210ENST00000468922 C14orf37Q86TY3 774 aa12.88□□□□□ -0.35
SYN3-210ENST00000468922 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
SYN3-210ENST00000468922 TET3O43151 1660 aa12.87□□□□□ -0.35
SYN3-210ENST00000468922 AFF2P51816 1311 aa12.87□□□□□ -0.35
SYN3-210ENST00000468922 ATF3P18847 181 aa12.86□□□□□ -0.35
SYN3-210ENST00000468922 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
SYN3-210ENST00000468922 CADPS2Q86UW7 1296 aa12.86□□□□□ -0.35
SYN3-210ENST00000468922 COL16A1Q07092 1604 aaPredicted RBP12.86□□□□□ -0.35
SYN3-210ENST00000468922 NOS1P29475 1434 aa12.86□□□□□ -0.35
SYN3-210ENST00000468922 RPRD2Q5VT52 1461 aaKnown RBP12.85□□□□□ -0.35
SYN3-210ENST00000468922 SRCAPQ6ZRS2 3230 aa12.85□□□□□ -0.35
SYN3-210ENST00000468922 RBM6P78332 1123 aaKnown RBP12.85□□□□□ -0.35
SYN3-210ENST00000468922 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
SYN3-210ENST00000468922 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
SYN3-210ENST00000468922 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
SYN3-210ENST00000468922 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
SYN3-210ENST00000468922 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
SYN3-210ENST00000468922 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.35
SYN3-210ENST00000468922 NWD1Q149M9 1564 aa12.83□□□□□ -0.36
SYN3-210ENST00000468922 NAIPQ13075 1403 aa12.83□□□□□ -0.36
SYN3-210ENST00000468922 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.36
SYN3-210ENST00000468922 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
SYN3-210ENST00000468922 PPP1R15AO75807 674 aaPredicted RBP12.82□□□□□ -0.36
SYN3-210ENST00000468922 KDM5AP29375 1690 aaKnown RBP12.82□□□□□ -0.36
SYN3-210ENST00000468922 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
SYN3-210ENST00000468922 C8orf37Q96NL8 207 aa12.81□□□□□ -0.36
SYN3-210ENST00000468922 SLC52A1Q9NWF4 448 aa12.81□□□□□ -0.36
SYN3-210ENST00000468922 NUP155O75694 1391 aa12.81□□□□□ -0.36
SYN3-210ENST00000468922 RGS12O14924 1447 aa12.8□□□□□ -0.36
SYN3-210ENST00000468922 BRINP3Q76B58 766 aa12.8□□□□□ -0.36
SYN3-210ENST00000468922 TBX22Q9Y458 520 aa12.8□□□□□ -0.36
SYN3-210ENST00000468922 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
SYN3-210ENST00000468922 E9PCH4 1651 aa12.8□□□□□ -0.36
SYN3-210ENST00000468922 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
SYN3-210ENST00000468922 SHPRHQ149N8 1683 aa12.79□□□□□ -0.36
SYN3-210ENST00000468922 ATAD2Q6PL18 1390 aa12.79□□□□□ -0.36
SYN3-210ENST00000468922 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
SYN3-210ENST00000468922 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
SYN3-210ENST00000468922 ADGRB3O60242 1522 aa12.76□□□□□ -0.37
SYN3-210ENST00000468922 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.75□□□□□ -0.37
SYN3-210ENST00000468922 SETD5Q9C0A6 1442 aa12.75□□□□□ -0.37
SYN3-210ENST00000468922 RIMS2Q9UQ26 1411 aa12.74□□□□□ -0.37
SYN3-210ENST00000468922 CCDC125Q86Z20 511 aa12.74□□□□□ -0.37
SYN3-210ENST00000468922 TMEM131LA2VDJ0 1609 aa12.73□□□□□ -0.37
SYN3-210ENST00000468922 DIP2AQ14689 1571 aa12.73□□□□□ -0.37
SYN3-210ENST00000468922 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
SYN3-210ENST00000468922 ZFYVE9O95405 1425 aa12.72□□□□□ -0.37
SYN3-210ENST00000468922 CHD2O14647 1828 aaKnown RBP12.72□□□□□ -0.37
SYN3-210ENST00000468922 AMOTL2Q9Y2J4 779 aa12.72□□□□□ -0.37
SYN3-210ENST00000468922 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
SYN3-210ENST00000468922 CHGAP10645 457 aaKnown RBP12.71□□□□□ -0.37
SYN3-210ENST00000468922 USP21Q9UK80 565 aa12.71□□□□□ -0.37
SYN3-210ENST00000468922 TRPC5Q9UL62 973 aaPredicted RBP12.71□□□□□ -0.37
SYN3-210ENST00000468922 SETBP1Q9Y6X0 1596 aa12.71□□□□□ -0.37
SYN3-210ENST00000468922 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.71□□□□□ -0.38
SYN3-210ENST00000468922 MYO5BQ9ULV0 1848 aa12.7□□□□□ -0.38
SYN3-210ENST00000468922 SPHKAPQ2M3C7 1700 aa12.7□□□□□ -0.38
SYN3-210ENST00000468922 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
SYN3-210ENST00000468922 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
SYN3-210ENST00000468922 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
SYN3-210ENST00000468922 DCCP43146 1447 aa12.68□□□□□ -0.38
SYN3-210ENST00000468922 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
SYN3-210ENST00000468922 TRPM2O94759 1503 aa12.67□□□□□ -0.38
SYN3-210ENST00000468922 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
SYN3-210ENST00000468922 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
SYN3-210ENST00000468922 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
SYN3-210ENST00000468922 MST1RQ04912 1400 aa12.65□□□□□ -0.38
SYN3-210ENST00000468922 CLTCL1P53675 1640 aa12.64□□□□□ -0.39
SYN3-210ENST00000468922 PTPRUQ92729 1446 aa12.63□□□□□ -0.39
SYN3-210ENST00000468922 MPHOSPH9Q99550 1183 aa12.62□□□□□ -0.39
SYN3-210ENST00000468922 ATRNO75882 1429 aa12.62□□□□□ -0.39
SYN3-210ENST00000468922 NHSL1Q5SYE7 1610 aa12.61□□□□□ -0.39
SYN3-210ENST00000468922 SF3B2Q13435 895 aaKnown RBP12.6□□□□□ -0.39
SYN3-210ENST00000468922 PTCH1Q13635 1447 aa12.6□□□□□ -0.39
SYN3-210ENST00000468922 KIF1BO60333 1816 aa12.6□□□□□ -0.39
SYN3-210ENST00000468922 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
SYN3-210ENST00000468922 HRCP23327 699 aa12.59□□□□□ -0.39
SYN3-210ENST00000468922 DEFB132Q7Z7B7 95 aa12.59□□□□□ -0.39
SYN3-210ENST00000468922 GJD4Q96KN9 370 aaPredicted RBP12.59□□□□□ -0.39
SYN3-210ENST00000468922 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
SYN3-210ENST00000468922 NEXMIFQ5QGS0 1516 aa12.58□□□□□ -0.4
SYN3-210ENST00000468922 BLMP54132 1417 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms