RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
LSM5-209ENST00000468872 TULP1O00294 542 aaPredicted RBP11.9□□□□□ -0.5
LSM5-209ENST00000468872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
LSM5-209ENST00000468872 METTL3Q86U44 580 aaKnown RBP11.89□□□□□ -0.51
LSM5-209ENST00000468872 BCANQ96GW7 911 aa11.89□□□□□ -0.51
LSM5-209ENST00000468872 TJAP1Q5JTD0 557 aa11.88□□□□□ -0.51
LSM5-209ENST00000468872 MTRQ99707 1265 aa11.86□□□□□ -0.51
LSM5-209ENST00000468872 IL21Q9HBE4 155 aa11.83□□□□□ -0.52
LSM5-209ENST00000468872 PRR14Q9BWN1 585 aa11.82□□□□□ -0.52
LSM5-209ENST00000468872 RGS20O76081 388 aa11.8□□□□□ -0.52
LSM5-209ENST00000468872 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
LSM5-209ENST00000468872 SLC10A3P09131 477 aa11.79□□□□□ -0.52
LSM5-209ENST00000468872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
LSM5-209ENST00000468872 PHOX2BQ99453 314 aa11.79□□□□□ -0.52
LSM5-209ENST00000468872 CFHP08603 1231 aa11.78□□□□□ -0.52
LSM5-209ENST00000468872 COPS2P61201 443 aa11.78□□□□□ -0.52
LSM5-209ENST00000468872 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
LSM5-209ENST00000468872 PCDHB3Q9Y5E6 796 aa11.77□□□□□ -0.53
LSM5-209ENST00000468872 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
LSM5-209ENST00000468872 KMT5BQ4FZB7 885 aa11.76□□□□□ -0.53
LSM5-209ENST00000468872 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
LSM5-209ENST00000468872 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
LSM5-209ENST00000468872 IRF6O14896 467 aa11.73□□□□□ -0.53
LSM5-209ENST00000468872 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
LSM5-209ENST00000468872 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
LSM5-209ENST00000468872 BLOC1S3Q6QNY0 202 aa11.73□□□□□ -0.53
LSM5-209ENST00000468872 ZPR1O75312 459 aa11.72□□□□□ -0.53
LSM5-209ENST00000468872 NKX2-3Q8TAU0 364 aa11.72□□□□□ -0.53
LSM5-209ENST00000468872 MINK1Q8N4C8 1332 aaPredicted RBP11.7□□□□□ -0.54
LSM5-209ENST00000468872 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
LSM5-209ENST00000468872 PPP1R18Q6NYC8 613 aa11.69□□□□□ -0.54
LSM5-209ENST00000468872 RDH13Q8NBN7 331 aa11.69□□□□□ -0.54
LSM5-209ENST00000468872 SULF1Q8IWU6 871 aa11.68□□□□□ -0.54
LSM5-209ENST00000468872 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
LSM5-209ENST00000468872 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.65□□□□□ -0.54
LSM5-209ENST00000468872 TLL1O43897 1013 aa11.64□□□□□ -0.55
LSM5-209ENST00000468872 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
LSM5-209ENST00000468872 NR1I2O75469 434 aa11.63□□□□□ -0.55
LSM5-209ENST00000468872 GCGRP47871 477 aa11.63□□□□□ -0.55
LSM5-209ENST00000468872 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
LSM5-209ENST00000468872 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
LSM5-209ENST00000468872 GGCXP38435 758 aa11.61□□□□□ -0.55
LSM5-209ENST00000468872 FUT2Q10981 343 aa11.61□□□□□ -0.55
LSM5-209ENST00000468872 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
LSM5-209ENST00000468872 ZMYND10O75800 440 aa11.6□□□□□ -0.55
LSM5-209ENST00000468872 SCUBE3Q8IX30 993 aa11.6□□□□□ -0.55
LSM5-209ENST00000468872 BARGINQ6ZT62 677 aa11.59□□□□□ -0.55
LSM5-209ENST00000468872 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
LSM5-209ENST00000468872 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
LSM5-209ENST00000468872 MORN1Q5T089 497 aa11.58□□□□□ -0.56
LSM5-209ENST00000468872 KRI1Q8N9T8 703 aaKnown RBP11.58□□□□□ -0.56
LSM5-209ENST00000468872 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
LSM5-209ENST00000468872 ADH1BP00325 375 aa11.57□□□□□ -0.56
LSM5-209ENST00000468872 CD46P15529 392 aa11.57□□□□□ -0.56
LSM5-209ENST00000468872 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
LSM5-209ENST00000468872 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
LSM5-209ENST00000468872 CLCN1P35523 988 aa11.55□□□□□ -0.56
LSM5-209ENST00000468872 GPCPD1Q9NPB8 672 aa11.55□□□□□ -0.56
LSM5-209ENST00000468872 S1PR4O95977 384 aa11.54□□□□□ -0.56
LSM5-209ENST00000468872 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
LSM5-209ENST00000468872 SPSB2Q99619 263 aa11.53□□□□□ -0.56
LSM5-209ENST00000468872 SLC27A5Q9Y2P5 690 aa11.53□□□□□ -0.56
LSM5-209ENST00000468872 V9GY48 417 aaPredicted RBP11.53□□□□□ -0.56
LSM5-209ENST00000468872 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
LSM5-209ENST00000468872 GRIPAP1Q4V328 841 aa11.51□□□□□ -0.57
LSM5-209ENST00000468872 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
LSM5-209ENST00000468872 SLC6A16Q9GZN6 736 aa11.51□□□□□ -0.57
LSM5-209ENST00000468872 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
LSM5-209ENST00000468872 KDM4AO75164 1064 aa11.5□□□□□ -0.57
LSM5-209ENST00000468872 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
LSM5-209ENST00000468872 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
LSM5-209ENST00000468872 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
LSM5-209ENST00000468872 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
LSM5-209ENST00000468872 AMHR2Q16671 573 aa11.46□□□□□ -0.57
LSM5-209ENST00000468872 BRICD5Q6PL45 260 aa11.46□□□□□ -0.57
LSM5-209ENST00000468872 EMID1Q96A84 441 aaPredicted RBP11.46□□□□□ -0.57
LSM5-209ENST00000468872 USP46P62068 366 aa11.45□□□□□ -0.58
LSM5-209ENST00000468872 TTLL12Q14166 644 aaPredicted RBP11.45□□□□□ -0.58
LSM5-209ENST00000468872 FAM160A2Q8N612 972 aaPredicted RBP11.45□□□□□ -0.58
LSM5-209ENST00000468872 SLC19A1P41440 591 aa11.44□□□□□ -0.58
LSM5-209ENST00000468872 RNF19BQ6ZMZ0 732 aa11.44□□□□□ -0.58
LSM5-209ENST00000468872 HOXA2O43364 376 aa11.43□□□□□ -0.58
LSM5-209ENST00000468872 SSTR3P32745 418 aaPredicted RBP11.43□□□□□ -0.58
LSM5-209ENST00000468872 HLA-CQ95604 372 aa11.43□□□□□ -0.58
LSM5-209ENST00000468872 Q3C1V9 767 aa11.42□□□□□ -0.58
LSM5-209ENST00000468872 TRIM66O15016 1216 aa11.41□□□□□ -0.58
LSM5-209ENST00000468872 GFRA3O60609 400 aa11.41□□□□□ -0.58
LSM5-209ENST00000468872 LAPTM4AQ15012 233 aa11.41□□□□□ -0.58
LSM5-209ENST00000468872 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
LSM5-209ENST00000468872 GIGYF2Q6Y7W6 1299 aaKnown RBP11.41□□□□□ -0.58
LSM5-209ENST00000468872 AK7Q96M32 723 aa11.41□□□□□ -0.58
LSM5-209ENST00000468872 PRDM9Q9NQV7 894 aa11.41□□□□□ -0.58
LSM5-209ENST00000468872 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
LSM5-209ENST00000468872 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
LSM5-209ENST00000468872 MSS51Q4VC12 460 aa11.39□□□□□ -0.59
LSM5-209ENST00000468872 SPRYD7Q5W111 196 aa11.39□□□□□ -0.59
LSM5-209ENST00000468872 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
LSM5-209ENST00000468872 Q6ZNB5 142 aa11.37□□□□□ -0.59
LSM5-209ENST00000468872 PARP9Q8IXQ6 854 aa11.37□□□□□ -0.59
LSM5-209ENST00000468872 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms