RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 ARXQ96QS3 562 aa17.48■□□□□ 0.39
SHANK2-214ENST00000468619 KDM5DQ9BY66 1539 aa17.48■□□□□ 0.39
SHANK2-214ENST00000468619 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
SHANK2-214ENST00000468619 NAP1L5Q96NT1 182 aaPredicted RBP17.47■□□□□ 0.39
SHANK2-214ENST00000468619 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
SHANK2-214ENST00000468619 ANKRD30BQ9BXX2 1392 aa17.47■□□□□ 0.39
SHANK2-214ENST00000468619 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
SHANK2-214ENST00000468619 RPRD2Q5VT52 1461 aaKnown RBP17.46■□□□□ 0.39
SHANK2-214ENST00000468619 FAM135AQ9P2D6 1515 aa17.46■□□□□ 0.39
SHANK2-214ENST00000468619 HECW2Q9P2P5 1572 aa17.46■□□□□ 0.39
SHANK2-214ENST00000468619 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
SHANK2-214ENST00000468619 C8orf34Q49A92 452 aa17.46■□□□□ 0.39
SHANK2-214ENST00000468619 USP47Q96K76 1375 aa17.46■□□□□ 0.39
SHANK2-214ENST00000468619 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
SHANK2-214ENST00000468619 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
SHANK2-214ENST00000468619 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
SHANK2-214ENST00000468619 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
SHANK2-214ENST00000468619 RGS3P49796 1198 aa17.43■□□□□ 0.38
SHANK2-214ENST00000468619 ABCA6Q8N139 1617 aa17.42■□□□□ 0.38
SHANK2-214ENST00000468619 PDE3BQ13370 1112 aa17.42■□□□□ 0.38
SHANK2-214ENST00000468619 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
SHANK2-214ENST00000468619 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
SHANK2-214ENST00000468619 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
SHANK2-214ENST00000468619 FRMPD1Q5SYB0 1578 aa17.41■□□□□ 0.38
SHANK2-214ENST00000468619 MAGI2Q86UL8 1455 aa17.41■□□□□ 0.38
SHANK2-214ENST00000468619 KIF3BO15066 747 aa17.41■□□□□ 0.38
SHANK2-214ENST00000468619 KDM2BQ8NHM5 1336 aa17.4■□□□□ 0.38
SHANK2-214ENST00000468619 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
SHANK2-214ENST00000468619 A2MP01023 1474 aa17.39■□□□□ 0.37
SHANK2-214ENST00000468619 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
SHANK2-214ENST00000468619 DEPDC5O75140 1603 aa17.39■□□□□ 0.37
SHANK2-214ENST00000468619 HSP90AA1P07900 732 aaKnown RBP17.38■□□□□ 0.37
SHANK2-214ENST00000468619 EIF2AK4Q9P2K8 1649 aaKnown RBP17.38■□□□□ 0.37
SHANK2-214ENST00000468619 CENPQQ7L2Z9 268 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-214ENST00000468619 SLKQ9H2G2 1235 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-214ENST00000468619 RALBP1Q15311 655 aa17.37■□□□□ 0.37
SHANK2-214ENST00000468619 L1TD1Q5T7N2 865 aaKnown RBP17.37■□□□□ 0.37
SHANK2-214ENST00000468619 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
SHANK2-214ENST00000468619 YEATS2Q9ULM3 1422 aa17.36■□□□□ 0.37
SHANK2-214ENST00000468619 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
SHANK2-214ENST00000468619 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
SHANK2-214ENST00000468619 RRP9O43818 475 aaKnown RBP17.34■□□□□ 0.37
SHANK2-214ENST00000468619 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
SHANK2-214ENST00000468619 ROCK2O75116 1388 aaKnown RBP17.34■□□□□ 0.37
SHANK2-214ENST00000468619 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
SHANK2-214ENST00000468619 COL17A1Q9UMD9 1497 aaPredicted RBP17.32■□□□□ 0.36
SHANK2-214ENST00000468619 E9PCH4 1651 aa17.32■□□□□ 0.36
SHANK2-214ENST00000468619 XRCC6P12956 609 aaKnown RBP eCLIP17.32■□□□□ 0.36
SHANK2-214ENST00000468619 PRDM15P57071 1507 aaPredicted RBP17.32■□□□□ 0.36
SHANK2-214ENST00000468619 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
SHANK2-214ENST00000468619 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
SHANK2-214ENST00000468619 GGT6Q6P531 493 aa17.3■□□□□ 0.36
SHANK2-214ENST00000468619 CARD11Q9BXL7 1154 aa17.3■□□□□ 0.36
SHANK2-214ENST00000468619 KANK1Q14678 1352 aa17.3■□□□□ 0.36
SHANK2-214ENST00000468619 CEP152O94986 1710 aa17.3■□□□□ 0.36
SHANK2-214ENST00000468619 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
SHANK2-214ENST00000468619 CLCN1P35523 988 aa17.3■□□□□ 0.36
SHANK2-214ENST00000468619 RNF17Q9BXT8 1623 aaKnown RBP17.3■□□□□ 0.36
SHANK2-214ENST00000468619 VWDEQ8N2E2 1590 aa17.3■□□□□ 0.36
SHANK2-214ENST00000468619 ST20-MTHFSA0A0A6YYL1 179 aa17.29■□□□□ 0.36
SHANK2-214ENST00000468619 PLA2R1Q13018 1463 aa17.29■□□□□ 0.36
SHANK2-214ENST00000468619 TET3O43151 1660 aa17.29■□□□□ 0.36
SHANK2-214ENST00000468619 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
SHANK2-214ENST00000468619 GOLGA6L3A6NEY3 463 aa17.27■□□□□ 0.35
SHANK2-214ENST00000468619 USP19O94966 1318 aa17.26■□□□□ 0.35
SHANK2-214ENST00000468619 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
SHANK2-214ENST00000468619 SEC24BO95487 1268 aa17.26■□□□□ 0.35
SHANK2-214ENST00000468619 CFAP65Q6ZU64 1925 aaKnown RBP17.24■□□□□ 0.35
SHANK2-214ENST00000468619 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
SHANK2-214ENST00000468619 BECN1Q14457 450 aa17.23■□□□□ 0.35
SHANK2-214ENST00000468619 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
SHANK2-214ENST00000468619 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
SHANK2-214ENST00000468619 ATP10AO60312 1499 aa17.23■□□□□ 0.35
SHANK2-214ENST00000468619 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
SHANK2-214ENST00000468619 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
SHANK2-214ENST00000468619 EFCAB6Q5THR3 1501 aa17.22■□□□□ 0.35
SHANK2-214ENST00000468619 SIGLEC1Q9BZZ2 1709 aa17.21■□□□□ 0.35
SHANK2-214ENST00000468619 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
SHANK2-214ENST00000468619 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
SHANK2-214ENST00000468619 RGL3Q3MIN7 710 aa17.2■□□□□ 0.34
SHANK2-214ENST00000468619 ABCC3O15438 1527 aa17.19■□□□□ 0.34
SHANK2-214ENST00000468619 FSD2A1L4K1 749 aa17.19■□□□□ 0.34
SHANK2-214ENST00000468619 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
SHANK2-214ENST00000468619 TRPM2O94759 1503 aa17.19■□□□□ 0.34
SHANK2-214ENST00000468619 LMTK2Q8IWU2 1503 aa17.19■□□□□ 0.34
SHANK2-214ENST00000468619 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
SHANK2-214ENST00000468619 CLTCL1P53675 1640 aa17.17■□□□□ 0.34
SHANK2-214ENST00000468619 CAMSAP1Q5T5Y3 1602 aa17.17■□□□□ 0.34
SHANK2-214ENST00000468619 UGGT1Q9NYU2 1555 aa17.17■□□□□ 0.34
SHANK2-214ENST00000468619 PTPRTO14522 1441 aa17.16■□□□□ 0.34
SHANK2-214ENST00000468619 DUSP27Q5VZP5 1158 aa17.16■□□□□ 0.34
SHANK2-214ENST00000468619 IGHDP01880 384 aa17.15■□□□□ 0.34
SHANK2-214ENST00000468619 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.15■□□□□ 0.34
SHANK2-214ENST00000468619 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
SHANK2-214ENST00000468619 NPATQ14207 1427 aa17.15■□□□□ 0.34
SHANK2-214ENST00000468619 REREQ9P2R6 1566 aa17.15■□□□□ 0.34
SHANK2-214ENST00000468619 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
SHANK2-214ENST00000468619 ADAMTS8Q9UP79 889 aa17.14■□□□□ 0.33
SHANK2-214ENST00000468619 ESPNB1AK53 854 aa17.14■□□□□ 0.33
SHANK2-214ENST00000468619 PER1O15534 1290 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms