RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
RBM39-226ENST00000468086 FECHP22830 423 aa11.12□□□□□ -0.63
RBM39-226ENST00000468086 APLP1P51693 650 aa11.12□□□□□ -0.63
RBM39-226ENST00000468086 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
RBM39-226ENST00000468086 DNAJB2P25686 324 aa11.11□□□□□ -0.63
RBM39-226ENST00000468086 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
RBM39-226ENST00000468086 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
RBM39-226ENST00000468086 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
RBM39-226ENST00000468086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
RBM39-226ENST00000468086 PXYLP1Q8TE99 480 aa11.1□□□□□ -0.63
RBM39-226ENST00000468086 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
RBM39-226ENST00000468086 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
RBM39-226ENST00000468086 RCCD1A6NED2 376 aa11.08□□□□□ -0.64
RBM39-226ENST00000468086 ZMYND10O75800 440 aa11.08□□□□□ -0.64
RBM39-226ENST00000468086 Q6ZNB5 142 aa11.08□□□□□ -0.64
RBM39-226ENST00000468086 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
RBM39-226ENST00000468086 IRF6O14896 467 aa11.07□□□□□ -0.64
RBM39-226ENST00000468086 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
RBM39-226ENST00000468086 PPP1R18Q6NYC8 613 aa11.07□□□□□ -0.64
RBM39-226ENST00000468086 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
RBM39-226ENST00000468086 BARGINQ6ZT62 677 aa11.06□□□□□ -0.64
RBM39-226ENST00000468086 LAPTM4AQ15012 233 aa11.05□□□□□ -0.64
RBM39-226ENST00000468086 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
RBM39-226ENST00000468086 COPS2P61201 443 aa11.04□□□□□ -0.64
RBM39-226ENST00000468086 PRR14Q9BWN1 585 aa11.03□□□□□ -0.64
RBM39-226ENST00000468086 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.03□□□□□ -0.64
RBM39-226ENST00000468086 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.65
RBM39-226ENST00000468086 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
RBM39-226ENST00000468086 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
RBM39-226ENST00000468086 GFRA3O60609 400 aa11□□□□□ -0.65
RBM39-226ENST00000468086 GGCXP38435 758 aa11□□□□□ -0.65
RBM39-226ENST00000468086 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
RBM39-226ENST00000468086 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
RBM39-226ENST00000468086 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
RBM39-226ENST00000468086 ZPR1O75312 459 aa10.98□□□□□ -0.65
RBM39-226ENST00000468086 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
RBM39-226ENST00000468086 PHOX2BQ99453 314 aa10.97□□□□□ -0.65
RBM39-226ENST00000468086 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
RBM39-226ENST00000468086 SULF1Q8IWU6 871 aa10.94□□□□□ -0.66
RBM39-226ENST00000468086 TMUB1Q9BVT8 246 aa10.94□□□□□ -0.66
RBM39-226ENST00000468086 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
RBM39-226ENST00000468086 NRG2O14511 850 aaPredicted RBP10.92□□□□□ -0.66
RBM39-226ENST00000468086 AK7Q96M32 723 aa10.92□□□□□ -0.66
RBM39-226ENST00000468086 CFHP08603 1231 aa10.91□□□□□ -0.66
RBM39-226ENST00000468086 SLC10A3P09131 477 aa10.91□□□□□ -0.66
RBM39-226ENST00000468086 CLCN1P35523 988 aa10.91□□□□□ -0.66
RBM39-226ENST00000468086 ACTN4O43707 911 aaKnown RBP10.9□□□□□ -0.66
RBM39-226ENST00000468086 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
RBM39-226ENST00000468086 TLL1O43897 1013 aa10.89□□□□□ -0.67
RBM39-226ENST00000468086 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
RBM39-226ENST00000468086 MDM2Q00987 491 aaPredicted RBP10.88□□□□□ -0.67
RBM39-226ENST00000468086 AMHR2Q16671 573 aa10.88□□□□□ -0.67
RBM39-226ENST00000468086 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
RBM39-226ENST00000468086 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
RBM39-226ENST00000468086 LCE2BO14633 110 aa10.87□□□□□ -0.67
RBM39-226ENST00000468086 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
RBM39-226ENST00000468086 RDH13Q8NBN7 331 aa10.86□□□□□ -0.67
RBM39-226ENST00000468086 RNF223E7ERA6 249 aa10.85□□□□□ -0.67
RBM39-226ENST00000468086 TRIM66O15016 1216 aa10.85□□□□□ -0.67
RBM39-226ENST00000468086 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
RBM39-226ENST00000468086 GCGRP47871 477 aa10.83□□□□□ -0.68
RBM39-226ENST00000468086 NR1I2O75469 434 aa10.82□□□□□ -0.68
RBM39-226ENST00000468086 CD46P15529 392 aa10.82□□□□□ -0.68
RBM39-226ENST00000468086 SLC19A1P41440 591 aa10.82□□□□□ -0.68
RBM39-226ENST00000468086 FAM217BQ9NTX9 383 aaPredicted RBP10.82□□□□□ -0.68
RBM39-226ENST00000468086 S1PR4O95977 384 aa10.81□□□□□ -0.68
RBM39-226ENST00000468086 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
RBM39-226ENST00000468086 ADH1BP00325 375 aa10.8□□□□□ -0.68
RBM39-226ENST00000468086 TTLL12Q14166 644 aaPredicted RBP10.8□□□□□ -0.68
RBM39-226ENST00000468086 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
RBM39-226ENST00000468086 EMID1Q96A84 441 aaPredicted RBP10.78□□□□□ -0.68
RBM39-226ENST00000468086 REPIN1Q9BWE0 567 aaKnown RBP10.78□□□□□ -0.68
RBM39-226ENST00000468086 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
RBM39-226ENST00000468086 SSTR3P32745 418 aaPredicted RBP10.77□□□□□ -0.69
RBM39-226ENST00000468086 PDE4DQ08499 809 aa10.77□□□□□ -0.69
RBM39-226ENST00000468086 GRIPAP1Q4V328 841 aa10.77□□□□□ -0.69
RBM39-226ENST00000468086 SPRYD7Q5W111 196 aa10.77□□□□□ -0.69
RBM39-226ENST00000468086 ATP6V1AP38606 617 aa10.76□□□□□ -0.69
RBM39-226ENST00000468086 GIGYF2Q6Y7W6 1299 aaKnown RBP10.76□□□□□ -0.69
RBM39-226ENST00000468086 PARP9Q8IXQ6 854 aa10.76□□□□□ -0.69
RBM39-226ENST00000468086 SLC6A16Q9GZN6 736 aa10.76□□□□□ -0.69
RBM39-226ENST00000468086 USP46P62068 366 aa10.75□□□□□ -0.69
RBM39-226ENST00000468086 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
RBM39-226ENST00000468086 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
RBM39-226ENST00000468086 KDM4AO75164 1064 aa10.74□□□□□ -0.69
RBM39-226ENST00000468086 FUT2Q10981 343 aa10.74□□□□□ -0.69
RBM39-226ENST00000468086 TRIM67Q6ZTA4 783 aa10.74□□□□□ -0.69
RBM39-226ENST00000468086 LIAT1Q6ZQX7 453 aa10.73□□□□□ -0.69
RBM39-226ENST00000468086 MORN1Q5T089 497 aa10.72□□□□□ -0.69
RBM39-226ENST00000468086 ZNF697Q5TEC3 545 aa10.71□□□□□ -0.69
RBM39-226ENST00000468086 SPSB2Q99619 263 aa10.71□□□□□ -0.69
RBM39-226ENST00000468086 PRR20EP86478 221 aa10.7□□□□□ -0.7
RBM39-226ENST00000468086 PRR20CP86479 221 aa10.7□□□□□ -0.7
RBM39-226ENST00000468086 PRR20DP86480 221 aa10.7□□□□□ -0.7
RBM39-226ENST00000468086 PRR20BP86481 221 aa10.7□□□□□ -0.7
RBM39-226ENST00000468086 PRR20AP86496 221 aa10.7□□□□□ -0.7
RBM39-226ENST00000468086 NUTM1Q86Y26 1132 aa10.7□□□□□ -0.7
RBM39-226ENST00000468086 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
RBM39-226ENST00000468086 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
RBM39-226ENST00000468086 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms