RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
SSR3-204ENST00000467733 PCDHB3Q9Y5E6 796 aa9.15□□□□□ -0.94
SSR3-204ENST00000467733 DNAJB2P25686 324 aa9.14□□□□□ -0.95
SSR3-204ENST00000467733 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
SSR3-204ENST00000467733 RBM46Q8TBY0 533 aaKnown RBP9.12□□□□□ -0.95
SSR3-204ENST00000467733 MYO15BQ96JP2 1530 aa9.1□□□□□ -0.95
SSR3-204ENST00000467733 PTGDRQ13258 359 aa9.1□□□□□ -0.95
SSR3-204ENST00000467733 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
SSR3-204ENST00000467733 KMT5BQ4FZB7 885 aa9.09□□□□□ -0.95
SSR3-204ENST00000467733 TMEM134Q9H6X4 195 aa9.09□□□□□ -0.95
SSR3-204ENST00000467733 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
SSR3-204ENST00000467733 BLOC1S3Q6QNY0 202 aa9.08□□□□□ -0.96
SSR3-204ENST00000467733 CC2D2AQ9P2K1 1620 aa9.08□□□□□ -0.96
SSR3-204ENST00000467733 KCNV2Q8TDN2 545 aa9.07□□□□□ -0.96
SSR3-204ENST00000467733 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
SSR3-204ENST00000467733 CECR2Q9BXF3 1484 aa9.07□□□□□ -0.96
SSR3-204ENST00000467733 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
SSR3-204ENST00000467733 ACTN4O43707 911 aaKnown RBP9.06□□□□□ -0.96
SSR3-204ENST00000467733 SLC19A1P41440 591 aa9.05□□□□□ -0.96
SSR3-204ENST00000467733 ANKLE1Q8NAG6 615 aa9.05□□□□□ -0.96
SSR3-204ENST00000467733 CFHP08603 1231 aa9.04□□□□□ -0.96
SSR3-204ENST00000467733 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
SSR3-204ENST00000467733 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
SSR3-204ENST00000467733 RCCD1A6NED2 376 aa9.03□□□□□ -0.96
SSR3-204ENST00000467733 TLL1O43897 1013 aa9.03□□□□□ -0.96
SSR3-204ENST00000467733 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
SSR3-204ENST00000467733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.97
SSR3-204ENST00000467733 NR1I2O75469 434 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 FCHSD2O94868 740 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 PRR20EP86478 221 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 PRR20CP86479 221 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 PRR20DP86480 221 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 PRR20BP86481 221 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 PRR20AP86496 221 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
SSR3-204ENST00000467733 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
SSR3-204ENST00000467733 ADH1BP00325 375 aa9□□□□□ -0.97
SSR3-204ENST00000467733 TRIM67Q6ZTA4 783 aa9□□□□□ -0.97
SSR3-204ENST00000467733 TSHZ2Q9NRE2 1034 aa9□□□□□ -0.97
SSR3-204ENST00000467733 DGAT1O75907 488 aa8.99□□□□□ -0.97
SSR3-204ENST00000467733 S1PR4O95977 384 aa8.99□□□□□ -0.97
SSR3-204ENST00000467733 EIF4G1Q04637 1599 aaKnown RBP8.99□□□□□ -0.97
SSR3-204ENST00000467733 OATP04181 439 aa8.98□□□□□ -0.97
SSR3-204ENST00000467733 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
SSR3-204ENST00000467733 EMID1Q96A84 441 aaPredicted RBP8.98□□□□□ -0.97
SSR3-204ENST00000467733 FAM161AQ3B820 660 aa8.96□□□□□ -0.98
SSR3-204ENST00000467733 ZNF697Q5TEC3 545 aa8.96□□□□□ -0.98
SSR3-204ENST00000467733 SLC6A16Q9GZN6 736 aa8.96□□□□□ -0.98
SSR3-204ENST00000467733 SLC10A3P09131 477 aa8.95□□□□□ -0.98
SSR3-204ENST00000467733 PXYLP1Q8TE99 480 aa8.95□□□□□ -0.98
SSR3-204ENST00000467733 PPEF1O14829 653 aaPredicted RBP8.94□□□□□ -0.98
SSR3-204ENST00000467733 HIC1Q14526 733 aa8.94□□□□□ -0.98
SSR3-204ENST00000467733 LIAT1Q6ZQX7 453 aa8.94□□□□□ -0.98
SSR3-204ENST00000467733 MYT1Q01538 1121 aa8.93□□□□□ -0.98
SSR3-204ENST00000467733 FAM187AA6NFU0 413 aa8.91□□□□□ -0.98
SSR3-204ENST00000467733 SEMA3EO15041 775 aa8.91□□□□□ -0.98
SSR3-204ENST00000467733 GDF9O60383 454 aa8.91□□□□□ -0.98
SSR3-204ENST00000467733 LMOD2Q6P5Q4 547 aa8.91□□□□□ -0.98
SSR3-204ENST00000467733 METTL3Q86U44 580 aaKnown RBP8.91□□□□□ -0.98
SSR3-204ENST00000467733 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
SSR3-204ENST00000467733 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
SSR3-204ENST00000467733 SPSB2Q99619 263 aa8.9□□□□□ -0.98
SSR3-204ENST00000467733 TNFRSF10AO00220 468 aa8.89□□□□□ -0.99
SSR3-204ENST00000467733 SCRIBQ14160 1630 aa8.88□□□□□ -0.99
SSR3-204ENST00000467733 SMYD5Q6GMV2 418 aa8.88□□□□□ -0.99
SSR3-204ENST00000467733 DCAF1Q9Y4B6 1507 aa8.87□□□□□ -0.99
SSR3-204ENST00000467733 PUS10Q3MIT2 529 aaKnown RBP8.87□□□□□ -0.99
SSR3-204ENST00000467733 PLA2G2CQ5R387 149 aa8.87□□□□□ -0.99
SSR3-204ENST00000467733 RPIAP49247 311 aa8.86□□□□□ -0.99
SSR3-204ENST00000467733 GNPATO15228 680 aa8.85□□□□□ -0.99
SSR3-204ENST00000467733 RDH13Q8NBN7 331 aa8.85□□□□□ -0.99
SSR3-204ENST00000467733 DAXXQ9UER7 740 aaPredicted RBP8.85□□□□□ -0.99
SSR3-204ENST00000467733 ZCCHC6Q5VYS8 1495 aaKnown RBP8.84□□□□□ -0.99
SSR3-204ENST00000467733 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
SSR3-204ENST00000467733 TESPA1A2RU30 521 aaPredicted RBP8.83□□□□□ -1
SSR3-204ENST00000467733 ATP6V1AP38606 617 aa8.83□□□□□ -1
SSR3-204ENST00000467733 MORN1Q5T089 497 aa8.83□□□□□ -1
SSR3-204ENST00000467733 FMNL1O95466 1100 aaPredicted RBP8.82□□□□□ -1
SSR3-204ENST00000467733 RBM26Q5T8P6 1007 aaKnown RBP8.82□□□□□ -1
SSR3-204ENST00000467733 AAASQ9NRG9 546 aa8.82□□□□□ -1
SSR3-204ENST00000467733 PKD2L1Q9P0L9 805 aa8.82□□□□□ -1
SSR3-204ENST00000467733 DDX11L8A8MPP1 907 aa8.81□□□□□ -1
SSR3-204ENST00000467733 CD2BP2O95400 341 aaKnown RBP8.81□□□□□ -1
SSR3-204ENST00000467733 FUT2Q10981 343 aa8.81□□□□□ -1
SSR3-204ENST00000467733 FOXC1Q12948 553 aa8.81□□□□□ -1
SSR3-204ENST00000467733 CRIPAKQ8N1N5 446 aa8.81□□□□□ -1
SSR3-204ENST00000467733 FCF1Q9Y324 198 aaKnown RBP8.81□□□□□ -1
SSR3-204ENST00000467733 SALL2Q9Y467 1007 aaPredicted RBP8.81□□□□□ -1
SSR3-204ENST00000467733 CUX2O14529 1486 aa8.81□□□□□ -1
SSR3-204ENST00000467733 THAP11Q96EK4 314 aa8.8□□□□□ -1
SSR3-204ENST00000467733 POTECB2RU33 542 aa8.79□□□□□ -1
SSR3-204ENST00000467733 GPR37O15354 613 aa8.79□□□□□ -1
SSR3-204ENST00000467733 ST8SIA5O15466 376 aa8.79□□□□□ -1
SSR3-204ENST00000467733 GCGRP47871 477 aa8.79□□□□□ -1
SSR3-204ENST00000467733 FECHP22830 423 aa8.78□□□□□ -1
SSR3-204ENST00000467733 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
SSR3-204ENST00000467733 TOR4AQ9NXH8 423 aa8.78□□□□□ -1
SSR3-204ENST00000467733 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
SSR3-204ENST00000467733 AVPP01185 164 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms