RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 E9PCH4 1651 aa14.09□□□□□ -0.15
SFXN3-204ENST00000466982 BCAR3O75815 825 aa14.09□□□□□ -0.15
SFXN3-204ENST00000466982 TMEM51Q9NW97 253 aa14.09□□□□□ -0.15
SFXN3-204ENST00000466982 ZMYM4Q5VZL5 1548 aa14.09□□□□□ -0.15
SFXN3-204ENST00000466982 ERCC6L2Q5T890 1561 aa14.09□□□□□ -0.15
SFXN3-204ENST00000466982 CHRM1P11229 460 aaPredicted RBP14.09□□□□□ -0.15
SFXN3-204ENST00000466982 ZNF830Q96NB3 372 aaPredicted RBP14.09□□□□□ -0.15
SFXN3-204ENST00000466982 ZHX1Q9UKY1 873 aaPredicted RBP14.09□□□□□ -0.15
SFXN3-204ENST00000466982 MCM4P33991 863 aa14.08□□□□□ -0.16
SFXN3-204ENST00000466982 EPRSP07814 1512 aaKnown RBP14.08□□□□□ -0.16
SFXN3-204ENST00000466982 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
SFXN3-204ENST00000466982 ESPNB1AK53 854 aa14.07□□□□□ -0.16
SFXN3-204ENST00000466982 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
SFXN3-204ENST00000466982 SHROOM2Q13796 1616 aa14.07□□□□□ -0.16
SFXN3-204ENST00000466982 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
SFXN3-204ENST00000466982 PANK3Q9H999 370 aa14.06□□□□□ -0.16
SFXN3-204ENST00000466982 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
SFXN3-204ENST00000466982 PTPRGP23470 1445 aa14.06□□□□□ -0.16
SFXN3-204ENST00000466982 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.06□□□□□ -0.16
SFXN3-204ENST00000466982 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
SFXN3-204ENST00000466982 TRAK2O60296 914 aa14.05□□□□□ -0.16
SFXN3-204ENST00000466982 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
SFXN3-204ENST00000466982 UTP14CQ5TAP6 766 aaKnown RBP14.05□□□□□ -0.16
SFXN3-204ENST00000466982 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
SFXN3-204ENST00000466982 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
SFXN3-204ENST00000466982 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
SFXN3-204ENST00000466982 MAP7D2Q96T17 732 aa14.04□□□□□ -0.16
SFXN3-204ENST00000466982 MYH16Q9H6N6 1097 aa14.04□□□□□ -0.16
SFXN3-204ENST00000466982 GRPEL1Q9HAV7 217 aa14.03□□□□□ -0.16
SFXN3-204ENST00000466982 ZNF521Q96K83 1311 aa14.02□□□□□ -0.16
SFXN3-204ENST00000466982 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.16
SFXN3-204ENST00000466982 MRE11P49959 708 aa14.02□□□□□ -0.16
SFXN3-204ENST00000466982 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.16
SFXN3-204ENST00000466982 VIRMAQ69YN4 1812 aaKnown RBP14.02□□□□□ -0.16
SFXN3-204ENST00000466982 SLFN5Q08AF3 891 aa14.02□□□□□ -0.17
SFXN3-204ENST00000466982 HOMEZQ8IX15 550 aa14.02□□□□□ -0.17
SFXN3-204ENST00000466982 ZNF777Q9ULD5 760 aaPredicted RBP14.02□□□□□ -0.17
SFXN3-204ENST00000466982 TBC1D32Q96NH3 1257 aa14.01□□□□□ -0.17
SFXN3-204ENST00000466982 PLEKHH2Q8IVE3 1493 aa14.01□□□□□ -0.17
SFXN3-204ENST00000466982 PANK1Q8TE04 598 aa14□□□□□ -0.17
SFXN3-204ENST00000466982 COG6Q9Y2V7 657 aa14□□□□□ -0.17
SFXN3-204ENST00000466982 EIF3AQ14152 1382 aaKnown RBP14□□□□□ -0.17
SFXN3-204ENST00000466982 DISP3Q9P2K9 1392 aa14□□□□□ -0.17
SFXN3-204ENST00000466982 WDR43Q15061 677 aaKnown RBP eCLIP14□□□□□ -0.17
SFXN3-204ENST00000466982 DMTNQ08495 405 aa14□□□□□ -0.17
SFXN3-204ENST00000466982 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
SFXN3-204ENST00000466982 GAS2L3Q86XJ1 694 aa13.99□□□□□ -0.17
SFXN3-204ENST00000466982 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
SFXN3-204ENST00000466982 INSRP06213 1382 aa13.98□□□□□ -0.17
SFXN3-204ENST00000466982 VGLL3A8MV65 326 aa13.98□□□□□ -0.17
SFXN3-204ENST00000466982 NUP155O75694 1391 aa13.98□□□□□ -0.17
SFXN3-204ENST00000466982 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
SFXN3-204ENST00000466982 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
SFXN3-204ENST00000466982 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
SFXN3-204ENST00000466982 CAMSAP2Q08AD1 1489 aa13.97□□□□□ -0.17
SFXN3-204ENST00000466982 CLUAP1Q96AJ1 413 aa13.97□□□□□ -0.17
SFXN3-204ENST00000466982 TRIM44Q96DX7 344 aaPredicted RBP13.97□□□□□ -0.17
SFXN3-204ENST00000466982 PPP2R1AP30153 589 aa13.96□□□□□ -0.17
SFXN3-204ENST00000466982 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
SFXN3-204ENST00000466982 TESK2Q96S53 571 aa13.96□□□□□ -0.17
SFXN3-204ENST00000466982 RAPGEF6Q8TEU7 1601 aa13.95□□□□□ -0.18
SFXN3-204ENST00000466982 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
SFXN3-204ENST00000466982 APAF1O14727 1248 aa13.95□□□□□ -0.18
SFXN3-204ENST00000466982 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
SFXN3-204ENST00000466982 CHMP5Q9NZZ3 219 aa13.95□□□□□ -0.18
SFXN3-204ENST00000466982 CFDP1Q9UEE9 299 aaPredicted RBP13.94□□□□□ -0.18
SFXN3-204ENST00000466982 NUP153P49790 1475 aaKnown RBP13.94□□□□□ -0.18
SFXN3-204ENST00000466982 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
SFXN3-204ENST00000466982 ARHGEF12Q9NZN5 1544 aa13.93□□□□□ -0.18
SFXN3-204ENST00000466982 TNNQ9UQP3 1299 aa13.93□□□□□ -0.18
SFXN3-204ENST00000466982 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
SFXN3-204ENST00000466982 CYB5RLQ6IPT4 315 aa13.93□□□□□ -0.18
SFXN3-204ENST00000466982 PDZRN3Q9UPQ7 1066 aa13.93□□□□□ -0.18
SFXN3-204ENST00000466982 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
SFXN3-204ENST00000466982 ABCA8O94911 1581 aa13.92□□□□□ -0.18
SFXN3-204ENST00000466982 CGNL1Q0VF96 1302 aa13.92□□□□□ -0.18
SFXN3-204ENST00000466982 VGFO15240 615 aaPredicted RBP13.92□□□□□ -0.18
SFXN3-204ENST00000466982 ANP32BQ92688 251 aaKnown RBP13.92□□□□□ -0.18
SFXN3-204ENST00000466982 NKTRP30414 1462 aaKnown RBP13.92□□□□□ -0.18
SFXN3-204ENST00000466982 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
SFXN3-204ENST00000466982 COL17A1Q9UMD9 1497 aaPredicted RBP13.91□□□□□ -0.18
SFXN3-204ENST00000466982 MFAP1P55081 439 aaKnown RBP13.91□□□□□ -0.18
SFXN3-204ENST00000466982 RIPK4P57078 832 aa13.91□□□□□ -0.18
SFXN3-204ENST00000466982 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
SFXN3-204ENST00000466982 ARID3AQ99856 593 aa13.9□□□□□ -0.18
SFXN3-204ENST00000466982 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
SFXN3-204ENST00000466982 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
SFXN3-204ENST00000466982 KIF20AO95235 890 aa13.89□□□□□ -0.19
SFXN3-204ENST00000466982 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
SFXN3-204ENST00000466982 PDE3AQ14432 1141 aa13.89□□□□□ -0.19
SFXN3-204ENST00000466982 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
SFXN3-204ENST00000466982 RLBP1P12271 317 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
SFXN3-204ENST00000466982 TERF1P54274 439 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 PRAG1Q86YV5 1406 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 ATP10BO94823 1461 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 ANKRD30AQ9BXX3 1397 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 RGS22Q8NE09 1264 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 MTERF4Q7Z6M4 381 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms