RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 TBX22Q9Y458 520 aa9.11□□□□□ -0.95
CXXC4-202ENST00000466963 GCC2Q8IWJ2 1684 aa9.1□□□□□ -0.95
CXXC4-202ENST00000466963 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
CXXC4-202ENST00000466963 SETD5Q9C0A6 1442 aa9.1□□□□□ -0.95
CXXC4-202ENST00000466963 RGS17Q9UGC6 210 aaPredicted RBP9.09□□□□□ -0.95
CXXC4-202ENST00000466963 TMEM94Q12767 1356 aa9.09□□□□□ -0.95
CXXC4-202ENST00000466963 IQGAP3Q86VI3 1631 aa9.09□□□□□ -0.95
CXXC4-202ENST00000466963 ANKRD30AQ9BXX3 1397 aa9.08□□□□□ -0.96
CXXC4-202ENST00000466963 NHSL1Q5SYE7 1610 aa9.08□□□□□ -0.96
CXXC4-202ENST00000466963 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
CXXC4-202ENST00000466963 PTCH1Q13635 1447 aa9.07□□□□□ -0.96
CXXC4-202ENST00000466963 ZFYVE9O95405 1425 aa9.06□□□□□ -0.96
CXXC4-202ENST00000466963 SPHKAPQ2M3C7 1700 aa9.06□□□□□ -0.96
CXXC4-202ENST00000466963 RANGAP1P46060 587 aaPredicted RBP9.06□□□□□ -0.96
CXXC4-202ENST00000466963 PROSER2Q86WR7 435 aaPredicted RBP9.05□□□□□ -0.96
CXXC4-202ENST00000466963 ATAD2Q6PL18 1390 aa9.05□□□□□ -0.96
CXXC4-202ENST00000466963 KIF15Q9NS87 1388 aa9.05□□□□□ -0.96
CXXC4-202ENST00000466963 SLAIN2Q9P270 581 aa9.05□□□□□ -0.96
CXXC4-202ENST00000466963 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
CXXC4-202ENST00000466963 NGLY1Q96IV0 654 aa9.04□□□□□ -0.96
CXXC4-202ENST00000466963 UNC13BO14795 1591 aa9.04□□□□□ -0.96
CXXC4-202ENST00000466963 UPF1Q92900 1129 aaKnown RBP eCLIP9.04□□□□□ -0.96
CXXC4-202ENST00000466963 C19orf44Q9H6X5 657 aa9.04□□□□□ -0.96
CXXC4-202ENST00000466963 SETBP1Q9Y6X0 1596 aa9.04□□□□□ -0.96
CXXC4-202ENST00000466963 ACIN1Q9UKV3 1341 aaKnown RBP9.03□□□□□ -0.96
CXXC4-202ENST00000466963 RXRBP28702 533 aa9.03□□□□□ -0.96
CXXC4-202ENST00000466963 LRP5O75197 1615 aa9.03□□□□□ -0.96
CXXC4-202ENST00000466963 COL22A1Q8NFW1 1626 aaPredicted RBP9.03□□□□□ -0.96
CXXC4-202ENST00000466963 POTEAQ6S8J7 498 aa9.03□□□□□ -0.96
CXXC4-202ENST00000466963 STAG3Q9UJ98 1225 aa9.03□□□□□ -0.96
CXXC4-202ENST00000466963 TMEM131LA2VDJ0 1609 aa9.03□□□□□ -0.96
CXXC4-202ENST00000466963 XRN1Q8IZH2 1706 aaKnown RBP9.02□□□□□ -0.97
CXXC4-202ENST00000466963 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.97
CXXC4-202ENST00000466963 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.02□□□□□ -0.97
CXXC4-202ENST00000466963 LTKP29376 864 aa9.01□□□□□ -0.97
CXXC4-202ENST00000466963 RBM6P78332 1123 aaKnown RBP9.01□□□□□ -0.97
CXXC4-202ENST00000466963 DAPK1P53355 1430 aa9.01□□□□□ -0.97
CXXC4-202ENST00000466963 RIMS2Q9UQ26 1411 aa9.01□□□□□ -0.97
CXXC4-202ENST00000466963 LRRC59Q96AG4 307 aaKnown RBP9□□□□□ -0.97
CXXC4-202ENST00000466963 ATF3P18847 181 aa9□□□□□ -0.97
CXXC4-202ENST00000466963 MEX3CQ5U5Q3 659 aaKnown RBP9□□□□□ -0.97
CXXC4-202ENST00000466963 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
CXXC4-202ENST00000466963 ABCC5O15440 1437 aa8.99□□□□□ -0.97
CXXC4-202ENST00000466963 ZNF644Q9H582 1327 aaPredicted RBP8.99□□□□□ -0.97
CXXC4-202ENST00000466963 ASXL1Q8IXJ9 1541 aa8.99□□□□□ -0.97
CXXC4-202ENST00000466963 ADRA2BP18089 450 aa8.99□□□□□ -0.97
CXXC4-202ENST00000466963 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
CXXC4-202ENST00000466963 ADGRL3Q9HAR2 1447 aa8.96□□□□□ -0.97
CXXC4-202ENST00000466963 LRP6O75581 1613 aa8.96□□□□□ -0.98
CXXC4-202ENST00000466963 ZRANB1Q9UGI0 708 aa8.96□□□□□ -0.98
CXXC4-202ENST00000466963 LRPPRCP42704 1394 aaKnown RBP8.96□□□□□ -0.98
CXXC4-202ENST00000466963 IDI1Q13907 227 aa8.95□□□□□ -0.98
CXXC4-202ENST00000466963 ADAMTS13Q76LX8 1427 aa8.95□□□□□ -0.98
CXXC4-202ENST00000466963 MARF1Q9Y4F3 1742 aaKnown RBP8.94□□□□□ -0.98
CXXC4-202ENST00000466963 ATRNO75882 1429 aa8.93□□□□□ -0.98
CXXC4-202ENST00000466963 MST1RQ04912 1400 aa8.93□□□□□ -0.98
CXXC4-202ENST00000466963 TRPC5Q9UL62 973 aaPredicted RBP8.93□□□□□ -0.98
CXXC4-202ENST00000466963 HFM1A2PYH4 1435 aa8.93□□□□□ -0.98
CXXC4-202ENST00000466963 RPGRIP1LQ68CZ1 1315 aa8.92□□□□□ -0.98
CXXC4-202ENST00000466963 KIF1AQ12756 1690 aa8.92□□□□□ -0.98
CXXC4-202ENST00000466963 PNPLA6Q8IY17 1366 aa8.92□□□□□ -0.98
CXXC4-202ENST00000466963 ANKRD50Q9ULJ7 1429 aa8.92□□□□□ -0.98
CXXC4-202ENST00000466963 RGS12O14924 1447 aa8.91□□□□□ -0.98
CXXC4-202ENST00000466963 FNBP4Q8N3X1 1017 aaPredicted RBP8.91□□□□□ -0.98
CXXC4-202ENST00000466963 CDC42BPGQ6DT37 1551 aa8.91□□□□□ -0.98
CXXC4-202ENST00000466963 C11orf95C9JLR9 678 aaPredicted RBP8.91□□□□□ -0.98
CXXC4-202ENST00000466963 AFF2P51816 1311 aa8.9□□□□□ -0.99
CXXC4-202ENST00000466963 BLMP54132 1417 aaPredicted RBP8.9□□□□□ -0.99
CXXC4-202ENST00000466963 NWD2Q9ULI1 1742 aa8.9□□□□□ -0.99
CXXC4-202ENST00000466963 NEXMIFQ5QGS0 1516 aa8.89□□□□□ -0.99
CXXC4-202ENST00000466963 SOS2Q07890 1332 aaPredicted RBP8.89□□□□□ -0.99
CXXC4-202ENST00000466963 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
CXXC4-202ENST00000466963 E9PCH4 1651 aa8.88□□□□□ -0.99
CXXC4-202ENST00000466963 APLP2Q06481 763 aa8.88□□□□□ -0.99
CXXC4-202ENST00000466963 PARD3Q8TEW0 1356 aa8.88□□□□□ -0.99
CXXC4-202ENST00000466963 MYO5BQ9ULV0 1848 aa8.88□□□□□ -0.99
CXXC4-202ENST00000466963 NRXN3Q9Y4C0 1643 aa8.87□□□□□ -0.99
CXXC4-202ENST00000466963 MYOM2P54296 1465 aa8.87□□□□□ -0.99
CXXC4-202ENST00000466963 KNDC1Q76NI1 1749 aa8.87□□□□□ -0.99
CXXC4-202ENST00000466963 SIRT1Q96EB6 747 aa8.87□□□□□ -0.99
CXXC4-202ENST00000466963 CFAP65Q6ZU64 1925 aaKnown RBP8.86□□□□□ -0.99
CXXC4-202ENST00000466963 QTRT2Q9H974 415 aaKnown RBP8.86□□□□□ -0.99
CXXC4-202ENST00000466963 C14orf37Q86TY3 774 aa8.86□□□□□ -0.99
CXXC4-202ENST00000466963 NALCNQ8IZF0 1738 aa8.86□□□□□ -0.99
CXXC4-202ENST00000466963 DISP2A7MBM2 1401 aa8.86□□□□□ -0.99
CXXC4-202ENST00000466963 NPHP3Q7Z494 1330 aa8.85□□□□□ -0.99
CXXC4-202ENST00000466963 C1orf167Q5SNV9 1468 aa8.85□□□□□ -0.99
CXXC4-202ENST00000466963 KIF1BO60333 1816 aa8.85□□□□□ -0.99
CXXC4-202ENST00000466963 BCANQ96GW7 911 aa8.85□□□□□ -0.99
CXXC4-202ENST00000466963 SLC26A8Q96RN1 970 aa8.85□□□□□ -0.99
CXXC4-202ENST00000466963 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
CXXC4-202ENST00000466963 ADGRB2O60241 1585 aa8.85□□□□□ -0.99
CXXC4-202ENST00000466963 RGPD1P0DJD0 1748 aa8.84□□□□□ -0.99
CXXC4-202ENST00000466963 TECPR2O15040 1411 aa8.84□□□□□ -0.99
CXXC4-202ENST00000466963 AMOTL2Q9Y2J4 779 aa8.84□□□□□ -0.99
CXXC4-202ENST00000466963 EIF3AQ14152 1382 aaKnown RBP8.84□□□□□ -0.99
CXXC4-202ENST00000466963 CCDC144AA2RUR9 1427 aa8.82□□□□□ -1
CXXC4-202ENST00000466963 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
CXXC4-202ENST00000466963 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
CXXC4-202ENST00000466963 RRP7BPQ9NSQ0 103 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms