RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
LRCH3-212ENST00000466845 KCNC4Q03721 635 aa10.36□□□□□ -0.75
LRCH3-212ENST00000466845 METTL3Q86U44 580 aaKnown RBP10.36□□□□□ -0.75
LRCH3-212ENST00000466845 RNF40O75150 1001 aa10.35□□□□□ -0.75
LRCH3-212ENST00000466845 RGS20O76081 388 aa10.35□□□□□ -0.75
LRCH3-212ENST00000466845 TTBK1Q5TCY1 1321 aaPredicted RBP10.34□□□□□ -0.75
LRCH3-212ENST00000466845 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-212ENST00000466845 MAP2K5Q13163 448 aa10.33□□□□□ -0.76
LRCH3-212ENST00000466845 FECHP22830 423 aa10.32□□□□□ -0.76
LRCH3-212ENST00000466845 MYT1Q01538 1121 aa10.32□□□□□ -0.76
LRCH3-212ENST00000466845 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
LRCH3-212ENST00000466845 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
LRCH3-212ENST00000466845 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
LRCH3-212ENST00000466845 IL21Q9HBE4 155 aa10.31□□□□□ -0.76
LRCH3-212ENST00000466845 IRF6O14896 467 aa10.29□□□□□ -0.76
LRCH3-212ENST00000466845 SULF1Q8IWU6 871 aa10.29□□□□□ -0.76
LRCH3-212ENST00000466845 A0A0G2JS52 829 aa10.28□□□□□ -0.76
LRCH3-212ENST00000466845 APLP1P51693 650 aa10.28□□□□□ -0.76
LRCH3-212ENST00000466845 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
LRCH3-212ENST00000466845 ACTN4O43707 911 aaKnown RBP10.26□□□□□ -0.77
LRCH3-212ENST00000466845 MTRQ99707 1265 aa10.25□□□□□ -0.77
LRCH3-212ENST00000466845 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
LRCH3-212ENST00000466845 CFHP08603 1231 aa10.22□□□□□ -0.77
LRCH3-212ENST00000466845 SLC10A3P09131 477 aa10.22□□□□□ -0.77
LRCH3-212ENST00000466845 BARGINQ6ZT62 677 aa10.22□□□□□ -0.77
LRCH3-212ENST00000466845 ZMYND10O75800 440 aa10.21□□□□□ -0.77
LRCH3-212ENST00000466845 KRI1Q8N9T8 703 aaKnown RBP10.2□□□□□ -0.78
LRCH3-212ENST00000466845 NR1I2O75469 434 aa10.19□□□□□ -0.78
LRCH3-212ENST00000466845 GGCXP38435 758 aa10.19□□□□□ -0.78
LRCH3-212ENST00000466845 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
LRCH3-212ENST00000466845 PHOX2BQ99453 314 aa10.19□□□□□ -0.78
LRCH3-212ENST00000466845 ZPR1O75312 459 aa10.18□□□□□ -0.78
LRCH3-212ENST00000466845 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
LRCH3-212ENST00000466845 CCDC102AQ96A19 550 aa10.18□□□□□ -0.78
LRCH3-212ENST00000466845 DDX11L8A8MPP1 907 aa10.17□□□□□ -0.78
LRCH3-212ENST00000466845 CLCN1P35523 988 aa10.17□□□□□ -0.78
LRCH3-212ENST00000466845 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
LRCH3-212ENST00000466845 BCANQ96GW7 911 aa10.17□□□□□ -0.78
LRCH3-212ENST00000466845 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
LRCH3-212ENST00000466845 GCGRP47871 477 aa10.16□□□□□ -0.78
LRCH3-212ENST00000466845 COPS2P61201 443 aa10.16□□□□□ -0.78
LRCH3-212ENST00000466845 ZNF516Q92618 1163 aa10.15□□□□□ -0.78
LRCH3-212ENST00000466845 BLOC1S3Q6QNY0 202 aa10.14□□□□□ -0.79
LRCH3-212ENST00000466845 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
LRCH3-212ENST00000466845 ATP6V1AP38606 617 aa10.13□□□□□ -0.79
LRCH3-212ENST00000466845 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
LRCH3-212ENST00000466845 CD46P15529 392 aa10.12□□□□□ -0.79
LRCH3-212ENST00000466845 USP46P62068 366 aa10.11□□□□□ -0.79
LRCH3-212ENST00000466845 MDM2Q00987 491 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-212ENST00000466845 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
LRCH3-212ENST00000466845 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
LRCH3-212ENST00000466845 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
LRCH3-212ENST00000466845 SALL2Q9Y467 1007 aaPredicted RBP10.1□□□□□ -0.79
LRCH3-212ENST00000466845 AMHR2Q16671 573 aa10.09□□□□□ -0.79
LRCH3-212ENST00000466845 AK7Q96M32 723 aa10.09□□□□□ -0.79
LRCH3-212ENST00000466845 ADH1BP00325 375 aa10.08□□□□□ -0.8
LRCH3-212ENST00000466845 MORN1Q5T089 497 aa10.08□□□□□ -0.8
LRCH3-212ENST00000466845 FUT2Q10981 343 aa10.07□□□□□ -0.8
LRCH3-212ENST00000466845 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
LRCH3-212ENST00000466845 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
LRCH3-212ENST00000466845 KDM4AO75164 1064 aa10.06□□□□□ -0.8
LRCH3-212ENST00000466845 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
LRCH3-212ENST00000466845 V9GY48 417 aaPredicted RBP10.06□□□□□ -0.8
LRCH3-212ENST00000466845 Q3C1V9 767 aa10.05□□□□□ -0.8
LRCH3-212ENST00000466845 FMNL1O95466 1100 aaPredicted RBP10.04□□□□□ -0.8
LRCH3-212ENST00000466845 SPSB2Q99619 263 aa10.04□□□□□ -0.8
LRCH3-212ENST00000466845 PUS10Q3MIT2 529 aaKnown RBP10.03□□□□□ -0.8
LRCH3-212ENST00000466845 SLC6A16Q9GZN6 736 aa10.03□□□□□ -0.8
LRCH3-212ENST00000466845 SSTR3P32745 418 aaPredicted RBP10.02□□□□□ -0.81
LRCH3-212ENST00000466845 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
LRCH3-212ENST00000466845 ERICH6Q7L0X2 663 aa10.02□□□□□ -0.81
LRCH3-212ENST00000466845 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.81
LRCH3-212ENST00000466845 TRIM66O15016 1216 aa10.01□□□□□ -0.81
LRCH3-212ENST00000466845 DIXDC1Q155Q3 683 aa10.01□□□□□ -0.81
LRCH3-212ENST00000466845 NUTM1Q86Y26 1132 aa10.01□□□□□ -0.81
LRCH3-212ENST00000466845 SLC27A5Q9Y2P5 690 aa10.01□□□□□ -0.81
LRCH3-212ENST00000466845 BRICD5Q6PL45 260 aa10□□□□□ -0.81
LRCH3-212ENST00000466845 THAP11Q96EK4 314 aa10□□□□□ -0.81
LRCH3-212ENST00000466845 IRX2Q9BZI1 471 aaPredicted RBP10□□□□□ -0.81
LRCH3-212ENST00000466845 RNF223E7ERA6 249 aa9.99□□□□□ -0.81
LRCH3-212ENST00000466845 LAPTM4AQ15012 233 aa9.99□□□□□ -0.81
LRCH3-212ENST00000466845 PRKD2Q9BZL6 878 aa9.99□□□□□ -0.81
LRCH3-212ENST00000466845 TLL1O43897 1013 aa9.98□□□□□ -0.81
LRCH3-212ENST00000466845 MSS51Q4VC12 460 aa9.97□□□□□ -0.81
LRCH3-212ENST00000466845 HOXA2O43364 376 aa9.96□□□□□ -0.82
LRCH3-212ENST00000466845 S1PR4O95977 384 aa9.96□□□□□ -0.82
LRCH3-212ENST00000466845 GIGYF2Q6Y7W6 1299 aaKnown RBP9.96□□□□□ -0.82
LRCH3-212ENST00000466845 REPIN1Q9BWE0 567 aaKnown RBP9.96□□□□□ -0.82
LRCH3-212ENST00000466845 GJA5P36382 358 aa9.94□□□□□ -0.82
LRCH3-212ENST00000466845 SLC19A1P41440 591 aa9.94□□□□□ -0.82
LRCH3-212ENST00000466845 PDE4DQ08499 809 aa9.93□□□□□ -0.82
LRCH3-212ENST00000466845 PARP9Q8IXQ6 854 aa9.93□□□□□ -0.82
LRCH3-212ENST00000466845 ARXQ96QS3 562 aa9.93□□□□□ -0.82
LRCH3-212ENST00000466845 SLC24A3Q9HC58 644 aa9.93□□□□□ -0.82
LRCH3-212ENST00000466845 FAM160A2Q8N612 972 aaPredicted RBP9.92□□□□□ -0.82
LRCH3-212ENST00000466845 USB1Q9BQ65 265 aaKnown RBP9.92□□□□□ -0.82
LRCH3-212ENST00000466845 SPIRE2Q8WWL2 714 aa9.91□□□□□ -0.82
LRCH3-212ENST00000466845 BEGAINQ9BUH8 593 aa9.91□□□□□ -0.82
LRCH3-212ENST00000466845 RPIAP49247 311 aa9.9□□□□□ -0.82
LRCH3-212ENST00000466845 FDX1P10109 184 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms