RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 SKIV2LQ15477 1246 aaKnown RBP8.61□□□□□ -1.03
UBP1-207ENST00000466441 MARVELD3Q96A59 401 aa8.61□□□□□ -1.03
UBP1-207ENST00000466441 ZBED2Q9BTP6 218 aa8.61□□□□□ -1.03
UBP1-207ENST00000466441 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
UBP1-207ENST00000466441 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
UBP1-207ENST00000466441 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
UBP1-207ENST00000466441 KIAA1468Q9P260 1216 aa8.6□□□□□ -1.03
UBP1-207ENST00000466441 RABGEF1Q9UJ41 708 aa8.6□□□□□ -1.03
UBP1-207ENST00000466441 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
UBP1-207ENST00000466441 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
UBP1-207ENST00000466441 ZNF687Q8N1G0 1237 aa8.59□□□□□ -1.03
UBP1-207ENST00000466441 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
UBP1-207ENST00000466441 PSEN2P49810 448 aa8.57□□□□□ -1.04
UBP1-207ENST00000466441 FLIIQ13045 1269 aa8.57□□□□□ -1.04
UBP1-207ENST00000466441 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
UBP1-207ENST00000466441 CD46P15529 392 aa8.56□□□□□ -1.04
UBP1-207ENST00000466441 ATP1B4Q9UN42 357 aaPredicted RBP8.56□□□□□ -1.04
UBP1-207ENST00000466441 FAM205CA6NFA0 338 aa8.55□□□□□ -1.04
UBP1-207ENST00000466441 DDX11L8A8MPP1 907 aa8.55□□□□□ -1.04
UBP1-207ENST00000466441 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
UBP1-207ENST00000466441 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
UBP1-207ENST00000466441 SMAPO00193 183 aa8.54□□□□□ -1.04
UBP1-207ENST00000466441 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
UBP1-207ENST00000466441 LAPTM4BQ86VI4 370 aa8.54□□□□□ -1.04
UBP1-207ENST00000466441 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
UBP1-207ENST00000466441 C3orf80F5H4A9 247 aa8.53□□□□□ -1.04
UBP1-207ENST00000466441 CLK2P49760 499 aaKnown RBP8.53□□□□□ -1.04
UBP1-207ENST00000466441 TK2O00142 265 aa8.52□□□□□ -1.05
UBP1-207ENST00000466441 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.05
UBP1-207ENST00000466441 TUSC1Q2TAM9 212 aa8.52□□□□□ -1.05
UBP1-207ENST00000466441 POTEEQ6S8J3 1075 aa8.52□□□□□ -1.05
UBP1-207ENST00000466441 RDH13Q8NBN7 331 aa8.52□□□□□ -1.05
UBP1-207ENST00000466441 HS3ST6Q96QI5 342 aa8.52□□□□□ -1.05
UBP1-207ENST00000466441 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
UBP1-207ENST00000466441 VPS9D1Q9Y2B5 631 aa8.52□□□□□ -1.05
UBP1-207ENST00000466441 GJA5P36382 358 aa8.51□□□□□ -1.05
UBP1-207ENST00000466441 DMRTA1Q5VZB9 504 aa8.51□□□□□ -1.05
UBP1-207ENST00000466441 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
UBP1-207ENST00000466441 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
UBP1-207ENST00000466441 POTEB3A0JP26 581 aa8.5□□□□□ -1.05
UBP1-207ENST00000466441 USP46P62068 366 aa8.5□□□□□ -1.05
UBP1-207ENST00000466441 POTEBQ6S5H4 581 aa8.5□□□□□ -1.05
UBP1-207ENST00000466441 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
UBP1-207ENST00000466441 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
UBP1-207ENST00000466441 ZMYND15Q9H091 742 aa8.5□□□□□ -1.05
UBP1-207ENST00000466441 SWT1Q5T5J6 900 aaKnown RBP8.49□□□□□ -1.05
UBP1-207ENST00000466441 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
UBP1-207ENST00000466441 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
UBP1-207ENST00000466441 SEPT9Q9UHD8 586 aaPredicted RBP8.49□□□□□ -1.05
UBP1-207ENST00000466441 MROH2BQ7Z745 1585 aa8.48□□□□□ -1.05
UBP1-207ENST00000466441 SPTLC1O15269 473 aa8.48□□□□□ -1.05
UBP1-207ENST00000466441 KDM4AO75164 1064 aa8.48□□□□□ -1.05
UBP1-207ENST00000466441 GCGRP47871 477 aa8.48□□□□□ -1.05
UBP1-207ENST00000466441 PROCA1Q8NCQ7 364 aaPredicted RBP8.48□□□□□ -1.05
UBP1-207ENST00000466441 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
UBP1-207ENST00000466441 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
UBP1-207ENST00000466441 TMEM259Q4ZIN3 620 aa8.46□□□□□ -1.06
UBP1-207ENST00000466441 MRPL50Q8N5N7 158 aaKnown RBP8.46□□□□□ -1.06
UBP1-207ENST00000466441 STAC3Q96MF2 364 aa8.46□□□□□ -1.06
UBP1-207ENST00000466441 SMARCA4P51532 1647 aa8.46□□□□□ -1.06
UBP1-207ENST00000466441 WIZO95785 1651 aa8.46□□□□□ -1.06
UBP1-207ENST00000466441 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
UBP1-207ENST00000466441 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
UBP1-207ENST00000466441 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
UBP1-207ENST00000466441 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
UBP1-207ENST00000466441 ADGRD1Q6QNK2 874 aa8.44□□□□□ -1.06
UBP1-207ENST00000466441 SAMD7Q7Z3H4 446 aa8.44□□□□□ -1.06
UBP1-207ENST00000466441 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
UBP1-207ENST00000466441 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
UBP1-207ENST00000466441 ZFRQ96KR1 1074 aaKnown RBP8.43□□□□□ -1.06
UBP1-207ENST00000466441 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
UBP1-207ENST00000466441 EIF4G1Q04637 1599 aaKnown RBP8.43□□□□□ -1.06
UBP1-207ENST00000466441 SLC10A3P09131 477 aa8.42□□□□□ -1.06
UBP1-207ENST00000466441 RFC5P40937 340 aa8.42□□□□□ -1.06
UBP1-207ENST00000466441 KMT5BQ4FZB7 885 aa8.42□□□□□ -1.06
UBP1-207ENST00000466441 CDAN1Q8IWY9 1227 aa8.42□□□□□ -1.06
UBP1-207ENST00000466441 RSF1Q96T23 1441 aaPredicted RBP8.42□□□□□ -1.06
UBP1-207ENST00000466441 SPDYE5A6NIY4 337 aa8.41□□□□□ -1.06
UBP1-207ENST00000466441 GOLGA8CPA6NN73 597 aa8.41□□□□□ -1.06
UBP1-207ENST00000466441 SUPT5HO00267 1087 aaKnown RBP8.41□□□□□ -1.06
UBP1-207ENST00000466441 HOXA2O43364 376 aa8.41□□□□□ -1.06
UBP1-207ENST00000466441 LRCH3Q96II8 777 aa8.41□□□□□ -1.06
UBP1-207ENST00000466441 PRR14Q9BWN1 585 aa8.41□□□□□ -1.06
UBP1-207ENST00000466441 BAZ1AQ9NRL2 1556 aaPredicted RBP8.4□□□□□ -1.06
UBP1-207ENST00000466441 LILRB3O75022 631 aa8.4□□□□□ -1.06
UBP1-207ENST00000466441 FDX1P10109 184 aa8.4□□□□□ -1.06
UBP1-207ENST00000466441 UBTFP17480 764 aaKnown RBP8.4□□□□□ -1.06
UBP1-207ENST00000466441 NDUFV2P19404 249 aa8.4□□□□□ -1.06
UBP1-207ENST00000466441 MCM6Q14566 821 aa8.4□□□□□ -1.06
UBP1-207ENST00000466441 A6NJR5 290 aa8.39□□□□□ -1.07
UBP1-207ENST00000466441 NUTM2BA6NNL0 878 aaPredicted RBP8.39□□□□□ -1.07
UBP1-207ENST00000466441 NUTM2EB1AL46 878 aaPredicted RBP8.39□□□□□ -1.07
UBP1-207ENST00000466441 APBB1O00213 710 aa8.39□□□□□ -1.07
UBP1-207ENST00000466441 RNF40O75150 1001 aa8.39□□□□□ -1.07
UBP1-207ENST00000466441 NUTM2DQ5VT03 806 aaPredicted RBP8.39□□□□□ -1.07
UBP1-207ENST00000466441 NUTM2AQ8IVF1 878 aaPredicted RBP8.39□□□□□ -1.07
UBP1-207ENST00000466441 ZBTB3Q9H5J0 574 aa8.39□□□□□ -1.07
UBP1-207ENST00000466441 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.39□□□□□ -1.07
UBP1-207ENST00000466441 HRO43593 1189 aa8.38□□□□□ -1.07
UBP1-207ENST00000466441 RAD21O60216 631 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms