RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 RTEL1-TNFRSF6BF6WH68 1400 aa8.94□□□□□ -0.98
CHMP3-206ENST00000466032 MAP3K4Q9Y6R4 1608 aa8.94□□□□□ -0.98
CHMP3-206ENST00000466032 PLEKHG5O94827 1062 aa8.93□□□□□ -0.98
CHMP3-206ENST00000466032 HFM1A2PYH4 1435 aa8.93□□□□□ -0.98
CHMP3-206ENST00000466032 ADGRL2O95490 1459 aa8.93□□□□□ -0.98
CHMP3-206ENST00000466032 MBD5Q9P267 1494 aa8.93□□□□□ -0.98
CHMP3-206ENST00000466032 SAMD9LQ8IVG5 1584 aa8.92□□□□□ -0.98
CHMP3-206ENST00000466032 ABCC1P33527 1531 aa8.92□□□□□ -0.98
CHMP3-206ENST00000466032 ADGRL1O94910 1474 aa8.92□□□□□ -0.98
CHMP3-206ENST00000466032 ZNF518AQ6AHZ1 1483 aa8.92□□□□□ -0.98
CHMP3-206ENST00000466032 ABCC5O15440 1437 aa8.92□□□□□ -0.98
CHMP3-206ENST00000466032 SETD5Q9C0A6 1442 aa8.92□□□□□ -0.98
CHMP3-206ENST00000466032 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
CHMP3-206ENST00000466032 MAST1Q9Y2H9 1570 aa8.91□□□□□ -0.98
CHMP3-206ENST00000466032 ZNF644Q9H582 1327 aaPredicted RBP8.91□□□□□ -0.98
CHMP3-206ENST00000466032 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
CHMP3-206ENST00000466032 DPY19L2Q6NUT2 758 aa8.91□□□□□ -0.98
CHMP3-206ENST00000466032 POTEEQ6S8J3 1075 aa8.91□□□□□ -0.98
CHMP3-206ENST00000466032 C9orf84Q5VXU9 1444 aa8.9□□□□□ -0.98
CHMP3-206ENST00000466032 SCAPERQ9BY12 1400 aa8.9□□□□□ -0.98
CHMP3-206ENST00000466032 CLSPNQ9HAW4 1339 aa8.9□□□□□ -0.98
CHMP3-206ENST00000466032 ITGAEP38570 1179 aa8.9□□□□□ -0.98
CHMP3-206ENST00000466032 HNRNPMP52272 730 aaKnown RBP eCLIP8.9□□□□□ -0.98
CHMP3-206ENST00000466032 SYCP2Q9BX26 1530 aa8.9□□□□□ -0.99
CHMP3-206ENST00000466032 NCOA1Q15788 1441 aa8.89□□□□□ -0.99
CHMP3-206ENST00000466032 SPAG9O60271 1321 aaKnown RBP8.89□□□□□ -0.99
CHMP3-206ENST00000466032 DENND4BO75064 1496 aaPredicted RBP8.89□□□□□ -0.99
CHMP3-206ENST00000466032 CROCC2H7BZ55 1655 aa8.88□□□□□ -0.99
CHMP3-206ENST00000466032 ADGBQ8N7X0 1667 aa8.88□□□□□ -0.99
CHMP3-206ENST00000466032 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
CHMP3-206ENST00000466032 MAGI2Q86UL8 1455 aa8.88□□□□□ -0.99
CHMP3-206ENST00000466032 PLXNC1O60486 1568 aa8.87□□□□□ -0.99
CHMP3-206ENST00000466032 MLH3Q9UHC1 1453 aa8.87□□□□□ -0.99
CHMP3-206ENST00000466032 NAIPQ13075 1403 aa8.87□□□□□ -0.99
CHMP3-206ENST00000466032 PTPRKQ15262 1439 aa8.87□□□□□ -0.99
CHMP3-206ENST00000466032 POGZQ7Z3K3 1410 aa8.87□□□□□ -0.99
CHMP3-206ENST00000466032 ZEB1P37275 1124 aaPredicted RBP8.86□□□□□ -0.99
CHMP3-206ENST00000466032 MIER1Q8N108 512 aa8.86□□□□□ -0.99
CHMP3-206ENST00000466032 PROM2Q8N271 834 aa8.86□□□□□ -0.99
CHMP3-206ENST00000466032 PCDHB8Q9UN66 801 aa8.86□□□□□ -0.99
CHMP3-206ENST00000466032 DUOX2Q9NRD8 1548 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 GCC2Q8IWJ2 1684 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 KIF13AQ9H1H9 1805 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 CHIC2Q9UKJ5 165 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 TRAPPC8Q9Y2L5 1435 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 KDM5CP41229 1560 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 KIF15Q9NS87 1388 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 ARHGEF12Q9NZN5 1544 aa8.85□□□□□ -0.99
CHMP3-206ENST00000466032 AFAP1Q8N556 730 aa8.84□□□□□ -0.99
CHMP3-206ENST00000466032 ANKRD50Q9ULJ7 1429 aa8.84□□□□□ -0.99
CHMP3-206ENST00000466032 GOLGA2Q08379 1002 aa8.83□□□□□ -1
CHMP3-206ENST00000466032 ADGRD1Q6QNK2 874 aa8.83□□□□□ -1
CHMP3-206ENST00000466032 ZNF775Q96BV0 537 aaPredicted RBP8.83□□□□□ -1
CHMP3-206ENST00000466032 FAM212AQ96EL1 285 aa8.83□□□□□ -1
CHMP3-206ENST00000466032 RRP7BPQ9NSQ0 103 aa8.83□□□□□ -1
CHMP3-206ENST00000466032 ATP7AQ04656 1500 aa8.83□□□□□ -1
CHMP3-206ENST00000466032 ZMYM4Q5VZL5 1548 aa8.82□□□□□ -1
CHMP3-206ENST00000466032 LAPTM4AQ15012 233 aa8.82□□□□□ -1
CHMP3-206ENST00000466032 DHX29Q7Z478 1369 aaKnown RBP8.82□□□□□ -1
CHMP3-206ENST00000466032 HECW2Q9P2P5 1572 aa8.82□□□□□ -1
CHMP3-206ENST00000466032 INO80Q9ULG1 1556 aaPredicted RBP8.82□□□□□ -1
CHMP3-206ENST00000466032 PPRC1Q5VV67 1664 aaKnown RBP8.81□□□□□ -1
CHMP3-206ENST00000466032 ZFYVE16Q7Z3T8 1539 aa8.81□□□□□ -1
CHMP3-206ENST00000466032 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
CHMP3-206ENST00000466032 G3V3G9 751 aa8.8□□□□□ -1
CHMP3-206ENST00000466032 ARSIQ5FYB1 569 aa8.8□□□□□ -1
CHMP3-206ENST00000466032 DCAF8Q5TAQ9 597 aa8.8□□□□□ -1
CHMP3-206ENST00000466032 RICTORQ6R327 1708 aa8.8□□□□□ -1
CHMP3-206ENST00000466032 EIF2AK4Q9P2K8 1649 aaKnown RBP8.8□□□□□ -1
CHMP3-206ENST00000466032 KANK1Q14678 1352 aa8.79□□□□□ -1
CHMP3-206ENST00000466032 HRO43593 1189 aa8.79□□□□□ -1
CHMP3-206ENST00000466032 TSPOAP1O95153 1857 aa8.79□□□□□ -1
CHMP3-206ENST00000466032 REREQ9P2R6 1566 aa8.78□□□□□ -1
CHMP3-206ENST00000466032 A2MP01023 1474 aa8.78□□□□□ -1
CHMP3-206ENST00000466032 RAPGEF3O95398 923 aa8.78□□□□□ -1
CHMP3-206ENST00000466032 TRIM52Q96A61 297 aa8.78□□□□□ -1
CHMP3-206ENST00000466032 TIMELESSQ9UNS1 1208 aa8.78□□□□□ -1
CHMP3-206ENST00000466032 KIDINS220Q9ULH0 1771 aa8.78□□□□□ -1
CHMP3-206ENST00000466032 ATP10AO60312 1499 aa8.77□□□□□ -1
CHMP3-206ENST00000466032 DHX57Q6P158 1386 aaKnown RBP8.77□□□□□ -1.01
CHMP3-206ENST00000466032 KDM5DQ9BY66 1539 aa8.77□□□□□ -1.01
CHMP3-206ENST00000466032 FAM135AQ9P2D6 1515 aa8.77□□□□□ -1.01
CHMP3-206ENST00000466032 AXIN2Q9Y2T1 843 aa8.77□□□□□ -1.01
CHMP3-206ENST00000466032 BCORL1Q5H9F3 1711 aa8.76□□□□□ -1.01
CHMP3-206ENST00000466032 AGLP35573 1532 aa8.75□□□□□ -1.01
CHMP3-206ENST00000466032 NUP155O75694 1391 aa8.75□□□□□ -1.01
CHMP3-206ENST00000466032 MPHOSPH9Q99550 1183 aa8.75□□□□□ -1.01
CHMP3-206ENST00000466032 UNC13BO14795 1591 aa8.74□□□□□ -1.01
CHMP3-206ENST00000466032 FRMPD1Q5SYB0 1578 aa8.74□□□□□ -1.01
CHMP3-206ENST00000466032 KDM6BO15054 1643 aa8.74□□□□□ -1.01
CHMP3-206ENST00000466032 KIF3BO15066 747 aa8.74□□□□□ -1.01
CHMP3-206ENST00000466032 KCTD12Q96CX2 325 aaKnown RBP8.74□□□□□ -1.01
CHMP3-206ENST00000466032 DIP2CQ9Y2E4 1556 aa8.73□□□□□ -1.01
CHMP3-206ENST00000466032 TMEM92Q6UXU6 159 aa8.73□□□□□ -1.01
CHMP3-206ENST00000466032 DEPDC5O75140 1603 aa8.72□□□□□ -1.01
CHMP3-206ENST00000466032 ARHGEF40Q8TER5 1519 aa8.72□□□□□ -1.01
CHMP3-206ENST00000466032 TK2O00142 265 aa8.72□□□□□ -1.01
CHMP3-206ENST00000466032 PYGBP11216 843 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms