RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
VPS8-218ENST00000465818 KDM5CP41229 1560 aa11.56□□□□□ -0.56
VPS8-218ENST00000465818 MLLT3P42568 568 aaPredicted RBP11.56□□□□□ -0.56
VPS8-218ENST00000465818 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
VPS8-218ENST00000465818 ILDR1Q86SU0 546 aaPredicted RBP11.56□□□□□ -0.56
VPS8-218ENST00000465818 INO80Q9ULG1 1556 aaPredicted RBP11.56□□□□□ -0.56
VPS8-218ENST00000465818 MBD5Q9P267 1494 aa11.56□□□□□ -0.56
VPS8-218ENST00000465818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.56
VPS8-218ENST00000465818 HECW2Q9P2P5 1572 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 MAST1Q9Y2H9 1570 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 DAPK1P53355 1430 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 POGZQ7Z3K3 1410 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 KDM6BO15054 1643 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 SHANK2Q9UPX8 1470 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 ZFYVE16Q7Z3T8 1539 aa11.55□□□□□ -0.56
VPS8-218ENST00000465818 ZNF518AQ6AHZ1 1483 aa11.54□□□□□ -0.56
VPS8-218ENST00000465818 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
VPS8-218ENST00000465818 ABCC5O15440 1437 aa11.53□□□□□ -0.56
VPS8-218ENST00000465818 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
VPS8-218ENST00000465818 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
VPS8-218ENST00000465818 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
VPS8-218ENST00000465818 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
VPS8-218ENST00000465818 C14orf37Q86TY3 774 aa11.53□□□□□ -0.56
VPS8-218ENST00000465818 ZMYM4Q5VZL5 1548 aa11.53□□□□□ -0.56
VPS8-218ENST00000465818 PLXNC1O60486 1568 aa11.53□□□□□ -0.56
VPS8-218ENST00000465818 DENND4BO75064 1496 aaPredicted RBP11.52□□□□□ -0.56
VPS8-218ENST00000465818 KIDINS220Q9ULH0 1771 aa11.52□□□□□ -0.57
VPS8-218ENST00000465818 ATP7AQ04656 1500 aa11.52□□□□□ -0.57
VPS8-218ENST00000465818 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
VPS8-218ENST00000465818 ABCA6Q8N139 1617 aa11.51□□□□□ -0.57
VPS8-218ENST00000465818 PTPRKQ15262 1439 aa11.51□□□□□ -0.57
VPS8-218ENST00000465818 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS8-218ENST00000465818 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
VPS8-218ENST00000465818 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
VPS8-218ENST00000465818 ADGRL2O95490 1459 aa11.5□□□□□ -0.57
VPS8-218ENST00000465818 COL17A1Q9UMD9 1497 aaPredicted RBP11.5□□□□□ -0.57
VPS8-218ENST00000465818 ARHGEF40Q8TER5 1519 aa11.5□□□□□ -0.57
VPS8-218ENST00000465818 ITGAEP38570 1179 aa11.49□□□□□ -0.57
VPS8-218ENST00000465818 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
VPS8-218ENST00000465818 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
VPS8-218ENST00000465818 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
VPS8-218ENST00000465818 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
VPS8-218ENST00000465818 GOLGA2Q08379 1002 aa11.47□□□□□ -0.57
VPS8-218ENST00000465818 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
VPS8-218ENST00000465818 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
VPS8-218ENST00000465818 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
VPS8-218ENST00000465818 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
VPS8-218ENST00000465818 MLH3Q9UHC1 1453 aa11.45□□□□□ -0.58
VPS8-218ENST00000465818 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
VPS8-218ENST00000465818 SPAG9O60271 1321 aaKnown RBP11.44□□□□□ -0.58
VPS8-218ENST00000465818 RAPGEF3O95398 923 aa11.44□□□□□ -0.58
VPS8-218ENST00000465818 POTEHQ6S545 545 aa11.44□□□□□ -0.58
VPS8-218ENST00000465818 AFAP1Q8N556 730 aa11.44□□□□□ -0.58
VPS8-218ENST00000465818 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 YEATS2Q9ULM3 1422 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 ROCK1Q13464 1354 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 DSG2Q14126 1118 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
VPS8-218ENST00000465818 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
VPS8-218ENST00000465818 CHIC2Q9UKJ5 165 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
VPS8-218ENST00000465818 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 KIF15Q9NS87 1388 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
VPS8-218ENST00000465818 DUOX2Q9NRD8 1548 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 DPYSL4O14531 572 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 TIE1P35590 1138 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 PCGF6Q9BYE7 350 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.586e-7■■■□□ 16.6
VPS8-218ENST00000465818 MAGI2Q86UL8 1455 aa11.42□□□□□ -0.58
VPS8-218ENST00000465818 BCORL1Q5H9F3 1711 aa11.41□□□□□ -0.58
VPS8-218ENST00000465818 GPIHBP1Q8IV16 184 aa11.41□□□□□ -0.58
VPS8-218ENST00000465818 NAIPQ13075 1403 aa11.41□□□□□ -0.58
VPS8-218ENST00000465818 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
VPS8-218ENST00000465818 TSPY4P0CV99 314 aa11.4□□□□□ -0.58
VPS8-218ENST00000465818 TSPY10P0CW01 314 aa11.4□□□□□ -0.58
VPS8-218ENST00000465818 ARXQ96QS3 562 aa11.4□□□□□ -0.58
VPS8-218ENST00000465818 DEPDC5O75140 1603 aa11.39□□□□□ -0.59
VPS8-218ENST00000465818 RNF17Q9BXT8 1623 aaKnown RBP11.39□□□□□ -0.59
VPS8-218ENST00000465818 UNC13BO14795 1591 aa11.39□□□□□ -0.59
VPS8-218ENST00000465818 GPR37O15354 613 aa11.39□□□□□ -0.59
VPS8-218ENST00000465818 AK7Q96M32 723 aa11.39□□□□□ -0.59
VPS8-218ENST00000465818 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
VPS8-218ENST00000465818 A2MP01023 1474 aa11.38□□□□□ -0.59
VPS8-218ENST00000465818 ERBINQ96RT1 1412 aa11.38□□□□□ -0.59
VPS8-218ENST00000465818 PDIA6Q15084 440 aa11.38□□□□□ -0.59
VPS8-218ENST00000465818 MYT1LQ9UL68 1186 aa11.38□□□□□ -0.59
VPS8-218ENST00000465818 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
VPS8-218ENST00000465818 MROH1Q8NDA8 1641 aa11.37□□□□□ -0.59
VPS8-218ENST00000465818 SETD5Q9C0A6 1442 aa11.36□□□□□ -0.59
VPS8-218ENST00000465818 ANKRD50Q9ULJ7 1429 aa11.36□□□□□ -0.59
VPS8-218ENST00000465818 GALR2O43603 387 aaPredicted RBP11.36□□□□□ -0.59
VPS8-218ENST00000465818 PDCD7Q8N8D1 485 aaKnown RBP11.36□□□□□ -0.59
VPS8-218ENST00000465818 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
VPS8-218ENST00000465818 ATP10AO60312 1499 aa11.36□□□□□ -0.59
VPS8-218ENST00000465818 PRDM15P57071 1507 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms