RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 IL21Q9HBE4 155 aa9.42□□□□□ -0.9
USP9X-204ENST00000463829 TJAP1Q5JTD0 557 aa9.4□□□□□ -0.9
USP9X-204ENST00000463829 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
USP9X-204ENST00000463829 MTRQ99707 1265 aa9.4□□□□□ -0.9
USP9X-204ENST00000463829 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
USP9X-204ENST00000463829 AK7Q96M32 723 aa9.39□□□□□ -0.91
USP9X-204ENST00000463829 MINK1Q8N4C8 1332 aaPredicted RBP9.38□□□□□ -0.91
USP9X-204ENST00000463829 SWT1Q5T5J6 900 aaKnown RBP9.38□□□□□ -0.91
USP9X-204ENST00000463829 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
USP9X-204ENST00000463829 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
USP9X-204ENST00000463829 IRF6O14896 467 aa9.35□□□□□ -0.91
USP9X-204ENST00000463829 FECHP22830 423 aa9.35□□□□□ -0.91
USP9X-204ENST00000463829 APLP1P51693 650 aa9.35□□□□□ -0.91
USP9X-204ENST00000463829 LAPTM4AQ15012 233 aa9.35□□□□□ -0.91
USP9X-204ENST00000463829 Q6ZNB5 142 aa9.35□□□□□ -0.91
USP9X-204ENST00000463829 GGCXP38435 758 aa9.34□□□□□ -0.91
USP9X-204ENST00000463829 RBM46Q8TBY0 533 aaKnown RBP9.34□□□□□ -0.91
USP9X-204ENST00000463829 EYA1Q99502 592 aa9.34□□□□□ -0.91
USP9X-204ENST00000463829 PPP1R18Q6NYC8 613 aa9.32□□□□□ -0.92
USP9X-204ENST00000463829 ZNF516Q92618 1163 aa9.32□□□□□ -0.92
USP9X-204ENST00000463829 PRKD2Q9BZL6 878 aa9.32□□□□□ -0.92
USP9X-204ENST00000463829 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.32□□□□□ -0.92
USP9X-204ENST00000463829 TRIM66O15016 1216 aa9.31□□□□□ -0.92
USP9X-204ENST00000463829 DNAJB2P25686 324 aa9.31□□□□□ -0.92
USP9X-204ENST00000463829 COPS2P61201 443 aa9.31□□□□□ -0.92
USP9X-204ENST00000463829 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
USP9X-204ENST00000463829 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
USP9X-204ENST00000463829 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
USP9X-204ENST00000463829 GFRA3O60609 400 aa9.29□□□□□ -0.92
USP9X-204ENST00000463829 PCDHB3Q9Y5E6 796 aa9.28□□□□□ -0.92
USP9X-204ENST00000463829 V9GY48 417 aaPredicted RBP9.28□□□□□ -0.92
USP9X-204ENST00000463829 PDE4DQ08499 809 aa9.27□□□□□ -0.93
USP9X-204ENST00000463829 KMT5BQ4FZB7 885 aa9.27□□□□□ -0.93
USP9X-204ENST00000463829 ZPR1O75312 459 aa9.26□□□□□ -0.93
USP9X-204ENST00000463829 NKX2-3Q8TAU0 364 aa9.26□□□□□ -0.93
USP9X-204ENST00000463829 ADGRG1Q9Y653 693 aa9.26□□□□□ -0.93
USP9X-204ENST00000463829 OATP04181 439 aa9.25□□□□□ -0.93
USP9X-204ENST00000463829 AMHR2Q16671 573 aa9.25□□□□□ -0.93
USP9X-204ENST00000463829 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
USP9X-204ENST00000463829 TMEM134Q9H6X4 195 aa9.25□□□□□ -0.93
USP9X-204ENST00000463829 RCCD1A6NED2 376 aa9.24□□□□□ -0.93
USP9X-204ENST00000463829 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
USP9X-204ENST00000463829 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
USP9X-204ENST00000463829 FAM161AQ3B820 660 aa9.22□□□□□ -0.93
USP9X-204ENST00000463829 NRG2O14511 850 aaPredicted RBP9.21□□□□□ -0.94
USP9X-204ENST00000463829 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.94
USP9X-204ENST00000463829 BLOC1S3Q6QNY0 202 aa9.21□□□□□ -0.94
USP9X-204ENST00000463829 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
USP9X-204ENST00000463829 GPBP1L1Q9HC44 474 aaPredicted RBP9.21□□□□□ -0.94
USP9X-204ENST00000463829 ACTN4O43707 911 aaKnown RBP9.2□□□□□ -0.94
USP9X-204ENST00000463829 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
USP9X-204ENST00000463829 KDM4CQ9H3R0 1056 aa9.2□□□□□ -0.94
USP9X-204ENST00000463829 CFHP08603 1231 aa9.19□□□□□ -0.94
USP9X-204ENST00000463829 TTLL12Q14166 644 aaPredicted RBP9.19□□□□□ -0.94
USP9X-204ENST00000463829 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
USP9X-204ENST00000463829 PHOX2BQ99453 314 aa9.19□□□□□ -0.94
USP9X-204ENST00000463829 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
USP9X-204ENST00000463829 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
USP9X-204ENST00000463829 NR1I2O75469 434 aa9.17□□□□□ -0.94
USP9X-204ENST00000463829 CLCN1P35523 988 aa9.17□□□□□ -0.94
USP9X-204ENST00000463829 PDZRN3Q9UPQ7 1066 aa9.17□□□□□ -0.94
USP9X-204ENST00000463829 MDM2Q00987 491 aaPredicted RBP9.15□□□□□ -0.94
USP9X-204ENST00000463829 GPCPD1Q9NPB8 672 aa9.15□□□□□ -0.94
USP9X-204ENST00000463829 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
USP9X-204ENST00000463829 SLC19A1P41440 591 aa9.14□□□□□ -0.95
USP9X-204ENST00000463829 SLC10A3P09131 477 aa9.13□□□□□ -0.95
USP9X-204ENST00000463829 GIGYF2Q6Y7W6 1299 aaKnown RBP9.13□□□□□ -0.95
USP9X-204ENST00000463829 REPIN1Q9BWE0 567 aaKnown RBP9.13□□□□□ -0.95
USP9X-204ENST00000463829 TLL1O43897 1013 aa9.12□□□□□ -0.95
USP9X-204ENST00000463829 ANKLE1Q8NAG6 615 aa9.12□□□□□ -0.95
USP9X-204ENST00000463829 IL27Q8NEV9 243 aa9.12□□□□□ -0.95
USP9X-204ENST00000463829 NLRP7Q8WX94 980 aa9.12□□□□□ -0.95
USP9X-204ENST00000463829 ADH1BP00325 375 aa9.11□□□□□ -0.95
USP9X-204ENST00000463829 S1PR4O95977 384 aa9.1□□□□□ -0.95
USP9X-204ENST00000463829 SSTR3P32745 418 aaPredicted RBP9.1□□□□□ -0.95
USP9X-204ENST00000463829 DDRGK1Q96HY6 314 aa9.1□□□□□ -0.95
USP9X-204ENST00000463829 FAM117AQ9C073 453 aa9.1□□□□□ -0.95
USP9X-204ENST00000463829 RDH13Q8NBN7 331 aa9.09□□□□□ -0.95
USP9X-204ENST00000463829 SLC6A16Q9GZN6 736 aa9.09□□□□□ -0.95
USP9X-204ENST00000463829 PPEF1O14829 653 aaPredicted RBP9.08□□□□□ -0.96
USP9X-204ENST00000463829 MS4A1P11836 297 aa9.08□□□□□ -0.96
USP9X-204ENST00000463829 ZNF598Q86UK7 904 aaKnown RBP9.08□□□□□ -0.96
USP9X-204ENST00000463829 SCUBE3Q8IX30 993 aa9.08□□□□□ -0.96
USP9X-204ENST00000463829 FAM217BQ9NTX9 383 aaPredicted RBP9.08□□□□□ -0.96
USP9X-204ENST00000463829 SPRYD7Q5W111 196 aa9.07□□□□□ -0.96
USP9X-204ENST00000463829 PUS10Q3MIT2 529 aaKnown RBP9.06□□□□□ -0.96
USP9X-204ENST00000463829 SULF1Q8IWU6 871 aa9.06□□□□□ -0.96
USP9X-204ENST00000463829 SPSB2Q99619 263 aa9.06□□□□□ -0.96
USP9X-204ENST00000463829 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
USP9X-204ENST00000463829 LCE2BO14633 110 aa9.05□□□□□ -0.96
USP9X-204ENST00000463829 PLEKHG3A1L390 1219 aa9.04□□□□□ -0.96
USP9X-204ENST00000463829 PKDCCQ504Y2 493 aa9.04□□□□□ -0.96
USP9X-204ENST00000463829 ZNF697Q5TEC3 545 aa9.04□□□□□ -0.96
USP9X-204ENST00000463829 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
USP9X-204ENST00000463829 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
USP9X-204ENST00000463829 BEGAINQ9BUH8 593 aa9.03□□□□□ -0.96
USP9X-204ENST00000463829 DGAT1O75907 488 aa9.02□□□□□ -0.97
USP9X-204ENST00000463829 ATP6V1AP38606 617 aa9.02□□□□□ -0.97
USP9X-204ENST00000463829 PRR20EP86478 221 aa9.01□□□□□ -0.97
USP9X-204ENST00000463829 PRR20CP86479 221 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms