RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 BMP2KQ9NSY1 1161 aaPredicted RBP5.19□□□□□ -1.58
COL8A1-205ENST00000463753 CAMSAP1Q5T5Y3 1602 aa5.19□□□□□ -1.58
COL8A1-205ENST00000463753 CEP170BQ9Y4F5 1589 aaPredicted RBP5.19□□□□□ -1.58
COL8A1-205ENST00000463753 IL27Q8NEV9 243 aa5.19□□□□□ -1.58
COL8A1-205ENST00000463753 BBXQ8WY36 941 aaPredicted RBP5.19□□□□□ -1.58
COL8A1-205ENST00000463753 NCOA3Q9Y6Q9 1424 aa5.18□□□□□ -1.58
COL8A1-205ENST00000463753 NEURL4Q96JN8 1562 aa5.18□□□□□ -1.58
COL8A1-205ENST00000463753 ATMINO43313 823 aaPredicted RBP5.18□□□□□ -1.58
COL8A1-205ENST00000463753 TRPC6Q9Y210 931 aa5.18□□□□□ -1.58
COL8A1-205ENST00000463753 ERICH6BQ5W0A0 696 aa5.18□□□□□ -1.58
COL8A1-205ENST00000463753 CCDC125Q86Z20 511 aa5.18□□□□□ -1.58
COL8A1-205ENST00000463753 ZNF316A6NFI3 1004 aaPredicted RBP5.17□□□□□ -1.58
COL8A1-205ENST00000463753 TTLL13PA6NNM8 815 aa5.17□□□□□ -1.58
COL8A1-205ENST00000463753 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.17□□□□□ -1.58
COL8A1-205ENST00000463753 AHDC1Q5TGY3 1603 aaPredicted RBP5.17□□□□□ -1.58
COL8A1-205ENST00000463753 LRRC7Q96NW7 1537 aa5.17□□□□□ -1.58
COL8A1-205ENST00000463753 CROCC2H7BZ55 1655 aa5.17□□□□□ -1.58
COL8A1-205ENST00000463753 NBR1Q14596 966 aa5.16□□□□□ -1.58
COL8A1-205ENST00000463753 IER5LQ5T953 404 aa5.16□□□□□ -1.58
COL8A1-205ENST00000463753 A2ML1A8K2U0 1454 aa5.16□□□□□ -1.58
COL8A1-205ENST00000463753 SHANK2Q9UPX8 1470 aa5.16□□□□□ -1.58
COL8A1-205ENST00000463753 XIRP1Q702N8 1843 aaKnown RBP5.16□□□□□ -1.58
COL8A1-205ENST00000463753 ZC3H13Q5T200 1668 aaKnown RBP5.16□□□□□ -1.58
COL8A1-205ENST00000463753 MLH3Q9UHC1 1453 aa5.16□□□□□ -1.58
COL8A1-205ENST00000463753 POTEIP0CG38 1075 aa5.16□□□□□ -1.58
COL8A1-205ENST00000463753 PLSCR2Q9NRY7 297 aa5.16□□□□□ -1.58
COL8A1-205ENST00000463753 CLSPNQ9HAW4 1339 aa5.15□□□□□ -1.58
COL8A1-205ENST00000463753 HECW1Q76N89 1606 aa5.15□□□□□ -1.58
COL8A1-205ENST00000463753 ATP7AQ04656 1500 aa5.15□□□□□ -1.58
COL8A1-205ENST00000463753 SOX12O15370 315 aa5.15□□□□□ -1.58
COL8A1-205ENST00000463753 TOM1O60784 492 aa5.15□□□□□ -1.58
COL8A1-205ENST00000463753 ITGAEP38570 1179 aa5.15□□□□□ -1.58
COL8A1-205ENST00000463753 A0A0U1RQG5 324 aaPredicted RBP5.15□□□□□ -1.59
COL8A1-205ENST00000463753 MYT1LQ9UL68 1186 aa5.15□□□□□ -1.59
COL8A1-205ENST00000463753 DIP2CQ9Y2E4 1556 aa5.14□□□□□ -1.59
COL8A1-205ENST00000463753 IQGAP1P46940 1657 aa5.14□□□□□ -1.59
COL8A1-205ENST00000463753 TMEM106CQ9BVX2 250 aa5.14□□□□□ -1.59
COL8A1-205ENST00000463753 SAMD9Q5K651 1589 aa5.14□□□□□ -1.59
COL8A1-205ENST00000463753 NKX1-1Q15270 411 aaPredicted RBP5.13□□□□□ -1.59
COL8A1-205ENST00000463753 BCL11BQ9C0K0 894 aaPredicted RBP5.13□□□□□ -1.59
COL8A1-205ENST00000463753 PLEKHH2Q8IVE3 1493 aa5.13□□□□□ -1.59
COL8A1-205ENST00000463753 ATN1P54259 1190 aaPredicted RBP5.13□□□□□ -1.59
COL8A1-205ENST00000463753 FBXO22Q8NEZ5 403 aa5.13□□□□□ -1.59
COL8A1-205ENST00000463753 PLXNC1O60486 1568 aa5.13□□□□□ -1.59
COL8A1-205ENST00000463753 TIMELESSQ9UNS1 1208 aa5.13□□□□□ -1.59
COL8A1-205ENST00000463753 RGPD3A6NKT7 1758 aaPredicted RBP5.12□□□□□ -1.59
COL8A1-205ENST00000463753 RGPD4Q7Z3J3 1758 aa5.12□□□□□ -1.59
COL8A1-205ENST00000463753 DNMT1P26358 1616 aaKnown RBP5.12□□□□□ -1.59
COL8A1-205ENST00000463753 MROH1Q8NDA8 1641 aa5.12□□□□□ -1.59
COL8A1-205ENST00000463753 STK25O00506 426 aa5.12□□□□□ -1.59
COL8A1-205ENST00000463753 IRX5P78411 483 aaPredicted RBP5.12□□□□□ -1.59
COL8A1-205ENST00000463753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.12□□□□□ -1.59
COL8A1-205ENST00000463753 NEXMIFQ5QGS0 1516 aa5.11□□□□□ -1.59
COL8A1-205ENST00000463753 CHGAP10645 457 aaKnown RBP5.11□□□□□ -1.59
COL8A1-205ENST00000463753 MYO5CQ9NQX4 1742 aa5.11□□□□□ -1.59
COL8A1-205ENST00000463753 RYDENQ9NUL5 291 aaKnown RBP5.11□□□□□ -1.59
COL8A1-205ENST00000463753 STK24Q9Y6E0 443 aa5.11□□□□□ -1.59
COL8A1-205ENST00000463753 NLRP1Q9C000 1473 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 SLC39A7Q92504 469 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 MFRPQ9BY79 579 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 ADGBQ8N7X0 1667 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 GTPBP6O43824 516 aaPredicted RBP5.1□□□□□ -1.59
COL8A1-205ENST00000463753 ITSN2Q9NZM3 1697 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 NEFLP07196 543 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 VSIG10Q8N0Z9 540 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 TRIM35Q9UPQ4 493 aa5.1□□□□□ -1.59
COL8A1-205ENST00000463753 COL16A1Q07092 1604 aaPredicted RBP5.09□□□□□ -1.59
COL8A1-205ENST00000463753 C7P10643 843 aa5.09□□□□□ -1.59
COL8A1-205ENST00000463753 EFCAB3Q8N7B9 438 aa5.09□□□□□ -1.59
COL8A1-205ENST00000463753 NKTRP30414 1462 aaKnown RBP5.09□□□□□ -1.59
COL8A1-205ENST00000463753 ZNF518AQ6AHZ1 1483 aa5.09□□□□□ -1.59
COL8A1-205ENST00000463753 ZMYND15Q9H091 742 aa5.09□□□□□ -1.6
COL8A1-205ENST00000463753 NLRP6P59044 892 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 DCBLD2Q96PD2 775 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 CABP2Q9NPB3 220 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 SPATA31A6Q5VVP1 1343 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 POTEFA5A3E0 1075 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 PDCD7Q8N8D1 485 aaKnown RBP5.08□□□□□ -1.6
COL8A1-205ENST00000463753 UPF1Q92900 1129 aaKnown RBP eCLIP5.08□□□□□ -1.6
COL8A1-205ENST00000463753 MS4A4AQ96JQ5 239 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 COL22A1Q8NFW1 1626 aaPredicted RBP5.08□□□□□ -1.6
COL8A1-205ENST00000463753 PTPN23Q9H3S7 1636 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 DIP2AQ14689 1571 aa5.08□□□□□ -1.6
COL8A1-205ENST00000463753 PDE4CQ08493 712 aa5.07□□□□□ -1.6
COL8A1-205ENST00000463753 GLIPR1L2Q4G1C9 344 aa5.07□□□□□ -1.6
COL8A1-205ENST00000463753 RTL5Q5HYW3 569 aaPredicted RBP5.07□□□□□ -1.6
COL8A1-205ENST00000463753 PLCB2Q00722 1185 aa5.07□□□□□ -1.6
COL8A1-205ENST00000463753 TMEM121BQ9BXQ6 578 aaPredicted RBP5.07□□□□□ -1.6
COL8A1-205ENST00000463753 RALGAPBQ86X10 1494 aa5.06□□□□□ -1.6
COL8A1-205ENST00000463753 PHLPP1O60346 1717 aa5.06□□□□□ -1.6
COL8A1-205ENST00000463753 RGPD1P0DJD0 1748 aa5.06□□□□□ -1.6
COL8A1-205ENST00000463753 ABCA6Q8N139 1617 aa5.06□□□□□ -1.6
COL8A1-205ENST00000463753 MKRN3Q13064 507 aaKnown RBP5.06□□□□□ -1.6
COL8A1-205ENST00000463753 ZNF772Q68DY9 489 aaPredicted RBP5.06□□□□□ -1.6
COL8A1-205ENST00000463753 OCEL1Q9H607 264 aa5.06□□□□□ -1.6
COL8A1-205ENST00000463753 FANCIQ9NVI1 1328 aa5.06□□□□□ -1.6
COL8A1-205ENST00000463753 STRCP1A6NGW2 1772 aa5.05□□□□□ -1.6
COL8A1-205ENST00000463753 RGS17Q9UGC6 210 aaPredicted RBP5.05□□□□□ -1.6
COL8A1-205ENST00000463753 AATKQ6ZMQ8 1374 aa5.05□□□□□ -1.6
COL8A1-205ENST00000463753 MARF1Q9Y4F3 1742 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms