RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
NDUFA4-202ENST00000463308 DDX12PQ92771 950 aa8.56□□□□□ -1.04
NDUFA4-202ENST00000463308 GMPR2Q9P2T1 348 aaKnown RBP8.56□□□□□ -1.04
NDUFA4-202ENST00000463308 AVPP01185 164 aa8.55□□□□□ -1.04
NDUFA4-202ENST00000463308 NBR1Q14596 966 aa8.55□□□□□ -1.04
NDUFA4-202ENST00000463308 AXIN1O15169 862 aa8.54□□□□□ -1.04
NDUFA4-202ENST00000463308 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
NDUFA4-202ENST00000463308 FAM198AQ9UFP1 575 aa8.54□□□□□ -1.04
NDUFA4-202ENST00000463308 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
NDUFA4-202ENST00000463308 DPYSL4O14531 572 aa8.52□□□□□ -1.05
NDUFA4-202ENST00000463308 CAMK2BQ13554 666 aa8.52□□□□□ -1.05
NDUFA4-202ENST00000463308 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
NDUFA4-202ENST00000463308 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
NDUFA4-202ENST00000463308 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
NDUFA4-202ENST00000463308 SMCPP49901 116 aaPredicted RBP8.51□□□□□ -1.05
NDUFA4-202ENST00000463308 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
NDUFA4-202ENST00000463308 RBM27Q9P2N5 1060 aaKnown RBP8.51□□□□□ -1.05
NDUFA4-202ENST00000463308 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
NDUFA4-202ENST00000463308 S1PR4O95977 384 aa8.48□□□□□ -1.05
NDUFA4-202ENST00000463308 SWT1Q5T5J6 900 aaKnown RBP8.48□□□□□ -1.05
NDUFA4-202ENST00000463308 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
NDUFA4-202ENST00000463308 BLOC1S3Q6QNY0 202 aa8.47□□□□□ -1.05
NDUFA4-202ENST00000463308 PKD2L1Q9P0L9 805 aa8.47□□□□□ -1.05
NDUFA4-202ENST00000463308 TLL1O43897 1013 aa8.45□□□□□ -1.06
NDUFA4-202ENST00000463308 FOXC1Q12948 553 aa8.44□□□□□ -1.06
NDUFA4-202ENST00000463308 TOR4AQ9NXH8 423 aa8.44□□□□□ -1.06
NDUFA4-202ENST00000463308 ZSCAN1Q8NBB4 408 aa8.43□□□□□ -1.06
NDUFA4-202ENST00000463308 SENP2Q9HC62 589 aa8.43□□□□□ -1.06
NDUFA4-202ENST00000463308 ADH1BP00325 375 aa8.42□□□□□ -1.06
NDUFA4-202ENST00000463308 CYP4X1Q8N118 509 aa8.42□□□□□ -1.06
NDUFA4-202ENST00000463308 PDIA6Q15084 440 aa8.41□□□□□ -1.06
NDUFA4-202ENST00000463308 SLC16A10Q8TF71 515 aa8.41□□□□□ -1.06
NDUFA4-202ENST00000463308 GTPBP6O43824 516 aaPredicted RBP8.4□□□□□ -1.06
NDUFA4-202ENST00000463308 PLA2G2CQ5R387 149 aa8.4□□□□□ -1.06
NDUFA4-202ENST00000463308 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
NDUFA4-202ENST00000463308 RPIAP49247 311 aa8.39□□□□□ -1.07
NDUFA4-202ENST00000463308 SLC6A16Q9GZN6 736 aa8.39□□□□□ -1.07
NDUFA4-202ENST00000463308 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
NDUFA4-202ENST00000463308 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
NDUFA4-202ENST00000463308 ATP13A2Q9NQ11 1180 aa8.38□□□□□ -1.07
NDUFA4-202ENST00000463308 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
NDUFA4-202ENST00000463308 KIFC2Q96AC6 838 aa8.37□□□□□ -1.07
NDUFA4-202ENST00000463308 ACTN4O43707 911 aaKnown RBP8.36□□□□□ -1.07
NDUFA4-202ENST00000463308 KMT5BQ4FZB7 885 aa8.36□□□□□ -1.07
NDUFA4-202ENST00000463308 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
NDUFA4-202ENST00000463308 NR1I2O75469 434 aa8.34□□□□□ -1.07
NDUFA4-202ENST00000463308 CD2BP2O95400 341 aaKnown RBP8.34□□□□□ -1.07
NDUFA4-202ENST00000463308 NPAS3Q8IXF0 933 aa8.32□□□□□ -1.08
NDUFA4-202ENST00000463308 IRF7Q92985 503 aa8.32□□□□□ -1.08
NDUFA4-202ENST00000463308 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
NDUFA4-202ENST00000463308 GMPRP36959 345 aa8.31□□□□□ -1.08
NDUFA4-202ENST00000463308 CADPS2Q86UW7 1296 aa8.31□□□□□ -1.08
NDUFA4-202ENST00000463308 EYA1Q99502 592 aa8.31□□□□□ -1.08
NDUFA4-202ENST00000463308 PRIM1P49642 420 aaKnown RBP8.3□□□□□ -1.08
NDUFA4-202ENST00000463308 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
NDUFA4-202ENST00000463308 NXF1Q9UBU9 619 aaKnown RBP8.3□□□□□ -1.08
NDUFA4-202ENST00000463308 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
NDUFA4-202ENST00000463308 GRXCR2A6NFK2 248 aa8.26□□□□□ -1.09
NDUFA4-202ENST00000463308 DNAJB2P25686 324 aa8.26□□□□□ -1.09
NDUFA4-202ENST00000463308 CFHP08603 1231 aa8.25□□□□□ -1.09
NDUFA4-202ENST00000463308 SNIP1Q8TAD8 396 aaKnown RBP8.25□□□□□ -1.09
NDUFA4-202ENST00000463308 SMPD1P17405 629 aa8.24□□□□□ -1.09
NDUFA4-202ENST00000463308 KCNMA1Q12791 1236 aa8.24□□□□□ -1.09
NDUFA4-202ENST00000463308 SPSB2Q99619 263 aa8.24□□□□□ -1.09
NDUFA4-202ENST00000463308 OSBPP22059 807 aa8.23□□□□□ -1.09
NDUFA4-202ENST00000463308 SCUBE3Q8IX30 993 aa8.22□□□□□ -1.09
NDUFA4-202ENST00000463308 KCTD17Q8N5Z5 321 aa8.22□□□□□ -1.09
NDUFA4-202ENST00000463308 TMEM134Q9H6X4 195 aa8.22□□□□□ -1.09
NDUFA4-202ENST00000463308 NPDC1Q9NQX5 325 aaPredicted RBP8.21□□□□□ -1.1
NDUFA4-202ENST00000463308 FCF1Q9Y324 198 aaKnown RBP8.21□□□□□ -1.1
NDUFA4-202ENST00000463308 WNT7AO00755 349 aa8.2□□□□□ -1.1
NDUFA4-202ENST00000463308 H3BM21 787 aa8.19□□□□□ -1.1
NDUFA4-202ENST00000463308 ZBTB24O43167 697 aaPredicted RBP8.18□□□□□ -1.1
NDUFA4-202ENST00000463308 RBM46Q8TBY0 533 aaKnown RBP8.17□□□□□ -1.1
NDUFA4-202ENST00000463308 ARIH1Q9Y4X5 557 aaPredicted RBP8.17□□□□□ -1.1
NDUFA4-202ENST00000463308 TMEM151AQ8N4L1 468 aa8.15□□□□□ -1.1
NDUFA4-202ENST00000463308 J3QL48 77 aa8.14□□□□□ -1.11
NDUFA4-202ENST00000463308 GSK3AP49840 483 aa8.14□□□□□ -1.11
NDUFA4-202ENST00000463308 REPIN1Q9BWE0 567 aaKnown RBP8.14□□□□□ -1.11
NDUFA4-202ENST00000463308 ERBB4Q15303 1308 aa8.13□□□□□ -1.11
NDUFA4-202ENST00000463308 HPS1Q92902 700 aa8.13□□□□□ -1.11
NDUFA4-202ENST00000463308 SLC10A3P09131 477 aa8.12□□□□□ -1.11
NDUFA4-202ENST00000463308 RNF225M0QZC1 329 aaPredicted RBP8.11□□□□□ -1.11
NDUFA4-202ENST00000463308 GDF11O95390 407 aa8.11□□□□□ -1.11
NDUFA4-202ENST00000463308 MRGPRX2Q96LB1 330 aa8.11□□□□□ -1.11
NDUFA4-202ENST00000463308 RCCD1A6NED2 376 aa8.1□□□□□ -1.11
NDUFA4-202ENST00000463308 VEGFBP49765 207 aa8.1□□□□□ -1.11
NDUFA4-202ENST00000463308 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
NDUFA4-202ENST00000463308 PUS10Q3MIT2 529 aaKnown RBP8.09□□□□□ -1.11
NDUFA4-202ENST00000463308 RASSF7Q02833 373 aa8.08□□□□□ -1.12
NDUFA4-202ENST00000463308 TRIM32Q13049 653 aa8.08□□□□□ -1.12
NDUFA4-202ENST00000463308 XP32Q5T750 250 aa8.08□□□□□ -1.12
NDUFA4-202ENST00000463308 FMNL1O95466 1100 aaPredicted RBP8.07□□□□□ -1.12
NDUFA4-202ENST00000463308 E2F4Q16254 413 aa8.07□□□□□ -1.12
NDUFA4-202ENST00000463308 THAP11Q96EK4 314 aa8.07□□□□□ -1.12
NDUFA4-202ENST00000463308 ADGRG1Q9Y653 693 aa8.07□□□□□ -1.12
NDUFA4-202ENST00000463308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
NDUFA4-202ENST00000463308 IGHA1P01876 353 aa8.06□□□□□ -1.12
NDUFA4-202ENST00000463308 VSIG8P0DPA2 414 aa8.05□□□□□ -1.12
NDUFA4-202ENST00000463308 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms