RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 PRR20CP86479 221 aa9.39□□□□□ -0.91
KDM3A-208ENST00000463013 PRR20DP86480 221 aa9.39□□□□□ -0.91
KDM3A-208ENST00000463013 PRR20BP86481 221 aa9.39□□□□□ -0.91
KDM3A-208ENST00000463013 PRR20AP86496 221 aa9.39□□□□□ -0.91
KDM3A-208ENST00000463013 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
KDM3A-208ENST00000463013 PCDHB3Q9Y5E6 796 aa9.39□□□□□ -0.91
KDM3A-208ENST00000463013 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
KDM3A-208ENST00000463013 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
KDM3A-208ENST00000463013 MYT1Q01538 1121 aa9.37□□□□□ -0.91
KDM3A-208ENST00000463013 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
KDM3A-208ENST00000463013 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
KDM3A-208ENST00000463013 ANKLE1Q8NAG6 615 aa9.35□□□□□ -0.91
KDM3A-208ENST00000463013 SEMA3EO15041 775 aa9.34□□□□□ -0.91
KDM3A-208ENST00000463013 TRIM67Q6ZTA4 783 aa9.34□□□□□ -0.91
KDM3A-208ENST00000463013 OSBPP22059 807 aa9.33□□□□□ -0.92
KDM3A-208ENST00000463013 TTC13Q8NBP0 860 aa9.33□□□□□ -0.92
KDM3A-208ENST00000463013 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
KDM3A-208ENST00000463013 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
KDM3A-208ENST00000463013 MLLT3P42568 568 aaPredicted RBP9.31□□□□□ -0.92
KDM3A-208ENST00000463013 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
KDM3A-208ENST00000463013 TREML4Q6UXN2 200 aa9.31□□□□□ -0.92
KDM3A-208ENST00000463013 CDHR5Q9HBB8 845 aa9.31□□□□□ -0.92
KDM3A-208ENST00000463013 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
KDM3A-208ENST00000463013 ZNF697Q5TEC3 545 aa9.3□□□□□ -0.92
KDM3A-208ENST00000463013 PADI6Q6TGC4 694 aa9.3□□□□□ -0.92
KDM3A-208ENST00000463013 BLOC1S3Q6QNY0 202 aa9.29□□□□□ -0.92
KDM3A-208ENST00000463013 EYA1Q99502 592 aa9.28□□□□□ -0.92
KDM3A-208ENST00000463013 POTECB2RU33 542 aa9.26□□□□□ -0.93
KDM3A-208ENST00000463013 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
KDM3A-208ENST00000463013 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
KDM3A-208ENST00000463013 NR1I2O75469 434 aa9.25□□□□□ -0.93
KDM3A-208ENST00000463013 DNAJB2P25686 324 aa9.25□□□□□ -0.93
KDM3A-208ENST00000463013 BCANQ96GW7 911 aa9.25□□□□□ -0.93
KDM3A-208ENST00000463013 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
KDM3A-208ENST00000463013 TNFRSF10AO00220 468 aa9.24□□□□□ -0.93
KDM3A-208ENST00000463013 ACTN4O43707 911 aaKnown RBP9.24□□□□□ -0.93
KDM3A-208ENST00000463013 GDF9O60383 454 aa9.24□□□□□ -0.93
KDM3A-208ENST00000463013 S1PR4O95977 384 aa9.24□□□□□ -0.93
KDM3A-208ENST00000463013 LIAT1Q6ZQX7 453 aa9.24□□□□□ -0.93
KDM3A-208ENST00000463013 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
KDM3A-208ENST00000463013 EMID1Q96A84 441 aaPredicted RBP9.24□□□□□ -0.93
KDM3A-208ENST00000463013 ADH1BP00325 375 aa9.23□□□□□ -0.93
KDM3A-208ENST00000463013 TULP1O00294 542 aaPredicted RBP9.22□□□□□ -0.93
KDM3A-208ENST00000463013 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
KDM3A-208ENST00000463013 PPEF1O14829 653 aaPredicted RBP9.21□□□□□ -0.94
KDM3A-208ENST00000463013 TLL1O43897 1013 aa9.21□□□□□ -0.94
KDM3A-208ENST00000463013 SLC6A16Q9GZN6 736 aa9.21□□□□□ -0.94
KDM3A-208ENST00000463013 RSPH4AQ5TD94 716 aa9.19□□□□□ -0.94
KDM3A-208ENST00000463013 TMEM134Q9H6X4 195 aa9.19□□□□□ -0.94
KDM3A-208ENST00000463013 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
KDM3A-208ENST00000463013 WFS1O76024 890 aa9.18□□□□□ -0.94
KDM3A-208ENST00000463013 RBM26Q5T8P6 1007 aaKnown RBP9.18□□□□□ -0.94
KDM3A-208ENST00000463013 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
KDM3A-208ENST00000463013 ST8SIA5O15466 376 aa9.17□□□□□ -0.94
KDM3A-208ENST00000463013 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
KDM3A-208ENST00000463013 CFHP08603 1231 aa9.17□□□□□ -0.94
KDM3A-208ENST00000463013 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
KDM3A-208ENST00000463013 INSM1Q01101 510 aaPredicted RBP9.16□□□□□ -0.94
KDM3A-208ENST00000463013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
KDM3A-208ENST00000463013 C11orf95C9JLR9 678 aaPredicted RBP9.15□□□□□ -0.94
KDM3A-208ENST00000463013 AXIN1O15169 862 aa9.15□□□□□ -0.94
KDM3A-208ENST00000463013 FOXC1Q12948 553 aa9.15□□□□□ -0.94
KDM3A-208ENST00000463013 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
KDM3A-208ENST00000463013 NUTM2FA1L443 756 aa9.14□□□□□ -0.95
KDM3A-208ENST00000463013 RPIAP49247 311 aa9.14□□□□□ -0.95
KDM3A-208ENST00000463013 SCUBE3Q8IX30 993 aa9.13□□□□□ -0.95
KDM3A-208ENST00000463013 CYP4X1Q8N118 509 aa9.13□□□□□ -0.95
KDM3A-208ENST00000463013 RCCD1A6NED2 376 aa9.12□□□□□ -0.95
KDM3A-208ENST00000463013 AVPP01185 164 aa9.12□□□□□ -0.95
KDM3A-208ENST00000463013 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
KDM3A-208ENST00000463013 PTGDRQ13258 359 aa9.11□□□□□ -0.95
KDM3A-208ENST00000463013 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
KDM3A-208ENST00000463013 SPSB2Q99619 263 aa9.11□□□□□ -0.95
KDM3A-208ENST00000463013 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
KDM3A-208ENST00000463013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
KDM3A-208ENST00000463013 GPR37O15354 613 aa9.09□□□□□ -0.95
KDM3A-208ENST00000463013 FCHSD2O94868 740 aa9.09□□□□□ -0.95
KDM3A-208ENST00000463013 WIPF1O43516 503 aa9.08□□□□□ -0.96
KDM3A-208ENST00000463013 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
KDM3A-208ENST00000463013 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
KDM3A-208ENST00000463013 TOR4AQ9NXH8 423 aa9.08□□□□□ -0.96
KDM3A-208ENST00000463013 OATP04181 439 aa9.07□□□□□ -0.96
KDM3A-208ENST00000463013 GMPR2Q9P2T1 348 aaKnown RBP9.07□□□□□ -0.96
KDM3A-208ENST00000463013 SLC10A3P09131 477 aa9.06□□□□□ -0.96
KDM3A-208ENST00000463013 HIC1Q14526 733 aa9.06□□□□□ -0.96
KDM3A-208ENST00000463013 TTC24A2A3L6 582 aaPredicted RBP9.05□□□□□ -0.96
KDM3A-208ENST00000463013 ZBTB24O43167 697 aaPredicted RBP9.05□□□□□ -0.96
KDM3A-208ENST00000463013 FAM181BA6NEQ2 426 aa9.04□□□□□ -0.96
KDM3A-208ENST00000463013 NFX1Q12986 1120 aaKnown RBP9.04□□□□□ -0.96
KDM3A-208ENST00000463013 SENP2Q9HC62 589 aa9.04□□□□□ -0.96
KDM3A-208ENST00000463013 DACH1Q9UI36 760 aa9.04□□□□□ -0.96
KDM3A-208ENST00000463013 GNPATO15228 680 aa9.03□□□□□ -0.96
KDM3A-208ENST00000463013 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
KDM3A-208ENST00000463013 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
KDM3A-208ENST00000463013 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
KDM3A-208ENST00000463013 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
KDM3A-208ENST00000463013 FECHP22830 423 aa9□□□□□ -0.97
KDM3A-208ENST00000463013 TERTO14746 1132 aaKnown RBP8.98□□□□□ -0.97
KDM3A-208ENST00000463013 ZMYND10O75800 440 aa8.98□□□□□ -0.97
KDM3A-208ENST00000463013 FAM161AQ3B820 660 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms