RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
SMC4-204ENST00000462787 RBM10P98175 930 aaKnown RBP19.34■□□□□ 0.69
SMC4-204ENST00000462787 CIZ1Q9ULV3 898 aaPredicted RBP19.34■□□□□ 0.69
SMC4-204ENST00000462787 BECN2A8MW95 431 aa19.34■□□□□ 0.69
SMC4-204ENST00000462787 SPAG9O60271 1321 aaKnown RBP19.33■□□□□ 0.69
SMC4-204ENST00000462787 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.69
SMC4-204ENST00000462787 CDC45O75419 566 aa19.33■□□□□ 0.68
SMC4-204ENST00000462787 LNPKQ9C0E8 428 aa19.33■□□□□ 0.68
SMC4-204ENST00000462787 CAVIN1Q6NZI2 390 aaKnown RBP19.32■□□□□ 0.68
SMC4-204ENST00000462787 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
SMC4-204ENST00000462787 FOXD4L6Q3SYB3 417 aaPredicted RBP19.32■□□□□ 0.68
SMC4-204ENST00000462787 FOXD4L3Q6VB84 417 aaPredicted RBP19.32■□□□□ 0.68
SMC4-204ENST00000462787 ZNF592Q92610 1267 aa19.32■□□□□ 0.68
SMC4-204ENST00000462787 CCDC34Q96HJ3 373 aa19.32■□□□□ 0.68
SMC4-204ENST00000462787 PODXL2Q9NZ53 605 aa19.32■□□□□ 0.68
SMC4-204ENST00000462787 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
SMC4-204ENST00000462787 API5Q9BZZ5 524 aaKnown RBP19.31■□□□□ 0.68
SMC4-204ENST00000462787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.31■□□□□ 0.683e-9■■■■■ 72.1
SMC4-204ENST00000462787 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
SMC4-204ENST00000462787 CCDC66A2RUB6 948 aa19.31■□□□□ 0.68
SMC4-204ENST00000462787 SLC4A10Q6U841 1118 aa19.31■□□□□ 0.68
SMC4-204ENST00000462787 HSP90B1P14625 803 aaKnown RBP19.31■□□□□ 0.68
SMC4-204ENST00000462787 STK26Q9P289 416 aa19.3■□□□□ 0.68
SMC4-204ENST00000462787 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
SMC4-204ENST00000462787 RILPL2Q969X0 211 aa19.3■□□□□ 0.68
SMC4-204ENST00000462787 NBPF8Q3BBV2 869 aa19.29■□□□□ 0.68
SMC4-204ENST00000462787 LETM1O95202 739 aaPredicted RBP19.28■□□□□ 0.68
SMC4-204ENST00000462787 ZSCAN30Q86W11 494 aa19.28■□□□□ 0.68
SMC4-204ENST00000462787 ROCK1Q13464 1354 aa19.28■□□□□ 0.68
SMC4-204ENST00000462787 C11orf95C9JLR9 678 aaPredicted RBP19.28■□□□□ 0.68
SMC4-204ENST00000462787 RABEP1Q15276 862 aa19.27■□□□□ 0.68
SMC4-204ENST00000462787 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
SMC4-204ENST00000462787 TSPY26PQ9H489 355 aa19.27■□□□□ 0.68
SMC4-204ENST00000462787 SETQ01105 290 aaPredicted RBP19.27■□□□□ 0.67
SMC4-204ENST00000462787 CHMP4CQ96CF2 233 aa19.27■□□□□ 0.67
SMC4-204ENST00000462787 RNF214Q8ND24 703 aa19.26■□□□□ 0.67
SMC4-204ENST00000462787 UQCRHLA0A096LP55 91 aa19.26■□□□□ 0.67
SMC4-204ENST00000462787 UQCRHP07919 91 aa19.26■□□□□ 0.67
SMC4-204ENST00000462787 IFT57Q9NWB7 429 aa19.26■□□□□ 0.67
SMC4-204ENST00000462787 PPP2R1AP30153 589 aa19.26■□□□□ 0.67
SMC4-204ENST00000462787 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
SMC4-204ENST00000462787 PDCL3Q9H2J4 239 aa19.26■□□□□ 0.67
SMC4-204ENST00000462787 ARGLU1Q9NWB6 273 aaPredicted RBP19.26■□□□□ 0.67
SMC4-204ENST00000462787 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
SMC4-204ENST00000462787 TIAM1Q13009 1591 aa19.25■□□□□ 0.67
SMC4-204ENST00000462787 H3BQV1 296 aa19.25■□□□□ 0.67
SMC4-204ENST00000462787 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
SMC4-204ENST00000462787 IFFO2Q5TF58 517 aa19.25■□□□□ 0.67
SMC4-204ENST00000462787 CWC22Q9HCG8 908 aaKnown RBP19.24■□□□□ 0.67
SMC4-204ENST00000462787 PRPF40AO75400 957 aaKnown RBP19.23■□□□□ 0.67
SMC4-204ENST00000462787 MCM2P49736 904 aa19.22■□□□□ 0.67
SMC4-204ENST00000462787 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
SMC4-204ENST00000462787 RUFY2Q8WXA3 655 aa19.22■□□□□ 0.67
SMC4-204ENST00000462787 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
SMC4-204ENST00000462787 K7ELQ4 463 aaPredicted RBP19.21■□□□□ 0.67
SMC4-204ENST00000462787 HDGFP51858 240 aaKnown RBP19.21■□□□□ 0.67
SMC4-204ENST00000462787 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
SMC4-204ENST00000462787 SMC3Q9UQE7 1217 aa19.21■□□□□ 0.67
SMC4-204ENST00000462787 BCAR3O75815 825 aa19.21■□□□□ 0.67
SMC4-204ENST00000462787 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
SMC4-204ENST00000462787 RIPK4P57078 832 aa19.2■□□□□ 0.66
SMC4-204ENST00000462787 FAM184AQ8NB25 1140 aa19.2■□□□□ 0.66
SMC4-204ENST00000462787 ANO2Q9NQ90 1003 aa19.2■□□□□ 0.66
SMC4-204ENST00000462787 SASS6Q6UVJ0 657 aa19.2■□□□□ 0.66
SMC4-204ENST00000462787 SOX12O15370 315 aa19.2■□□□□ 0.66
SMC4-204ENST00000462787 EVC2Q86UK5 1308 aa19.19■□□□□ 0.66
SMC4-204ENST00000462787 NOM1Q5C9Z4 860 aaKnown RBP19.19■□□□□ 0.66
SMC4-204ENST00000462787 ZKSCAN1P17029 563 aaPredicted RBP19.19■□□□□ 0.66
SMC4-204ENST00000462787 PLEKHG5O94827 1062 aa19.18■□□□□ 0.66
SMC4-204ENST00000462787 KIF3BO15066 747 aa19.18■□□□□ 0.66
SMC4-204ENST00000462787 HOMER1Q86YM7 354 aa19.18■□□□□ 0.66
SMC4-204ENST00000462787 GCC1Q96CN9 775 aa19.18■□□□□ 0.66
SMC4-204ENST00000462787 ANKRD50Q9ULJ7 1429 aa19.18■□□□□ 0.66
SMC4-204ENST00000462787 GGT6Q6P531 493 aa19.18■□□□□ 0.66
SMC4-204ENST00000462787 CCAR2Q8N163 923 aaKnown RBP19.18■□□□□ 0.66
SMC4-204ENST00000462787 BICD2Q8TD16 824 aa19.17■□□□□ 0.66
SMC4-204ENST00000462787 DIAPH1O60610 1272 aaKnown RBP19.16■□□□□ 0.66
SMC4-204ENST00000462787 TAF3Q5VWG9 929 aa19.16■□□□□ 0.66
SMC4-204ENST00000462787 TCP11L2Q8N4U5 519 aa19.16■□□□□ 0.66
SMC4-204ENST00000462787 NOC3LQ8WTT2 800 aaKnown RBP19.16■□□□□ 0.66
SMC4-204ENST00000462787 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
SMC4-204ENST00000462787 CT47B1P0C2W7 299 aaPredicted RBP19.15■□□□□ 0.66
SMC4-204ENST00000462787 ZMYND15Q9H091 742 aa19.15■□□□□ 0.66
SMC4-204ENST00000462787 CLCN1P35523 988 aa19.15■□□□□ 0.66
SMC4-204ENST00000462787 MNS1Q8NEH6 495 aa19.15■□□□□ 0.66
SMC4-204ENST00000462787 CWC15Q9P013 229 aaKnown RBP19.15■□□□□ 0.66
SMC4-204ENST00000462787 KIAA1107Q9UPP5 1409 aa19.15■□□□□ 0.66
SMC4-204ENST00000462787 GNAI1P63096 354 aa19.14■□□□□ 0.65
SMC4-204ENST00000462787 VPS37CA5D8V6 355 aaPredicted RBP19.14■□□□□ 0.65
SMC4-204ENST00000462787 TPD52L1Q16890 204 aaPredicted RBP19.14■□□□□ 0.65
SMC4-204ENST00000462787 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.65
SMC4-204ENST00000462787 NCOA1Q15788 1441 aa19.13■□□□□ 0.65
SMC4-204ENST00000462787 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
SMC4-204ENST00000462787 CHMP3Q9Y3E7 222 aa19.13■□□□□ 0.65
SMC4-204ENST00000462787 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
SMC4-204ENST00000462787 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
SMC4-204ENST00000462787 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
SMC4-204ENST00000462787 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
SMC4-204ENST00000462787 TPM1P09493 284 aa19.11■□□□□ 0.65
SMC4-204ENST00000462787 WDR63Q8IWG1 891 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms