RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 IDI1Q13907 227 aa15.8■□□□□ 0.12
TRAPPC3-205ENST00000462715 UGGT1Q9NYU2 1555 aa15.8■□□□□ 0.12
TRAPPC3-205ENST00000462715 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
TRAPPC3-205ENST00000462715 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
TRAPPC3-205ENST00000462715 KDM5AP29375 1690 aaKnown RBP15.78■□□□□ 0.12
TRAPPC3-205ENST00000462715 THEMISQ8N1K5 641 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC3-205ENST00000462715 CCDC144AA2RUR9 1427 aa15.77■□□□□ 0.12
TRAPPC3-205ENST00000462715 ADGRB3O60242 1522 aa15.77■□□□□ 0.12
TRAPPC3-205ENST00000462715 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.11
TRAPPC3-205ENST00000462715 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
TRAPPC3-205ENST00000462715 ANKRD30BQ9BXX2 1392 aa15.74■□□□□ 0.11
TRAPPC3-205ENST00000462715 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
TRAPPC3-205ENST00000462715 HSPA2P54652 639 aa15.74■□□□□ 0.11
TRAPPC3-205ENST00000462715 TMEM131LA2VDJ0 1609 aa15.73■□□□□ 0.11
TRAPPC3-205ENST00000462715 KIF1BO60333 1816 aa15.73■□□□□ 0.11
TRAPPC3-205ENST00000462715 TMEM2Q9UHN6 1383 aa15.7■□□□□ 0.1
TRAPPC3-205ENST00000462715 SLIT1O75093 1534 aa15.7■□□□□ 0.1
TRAPPC3-205ENST00000462715 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
TRAPPC3-205ENST00000462715 EID1Q9Y6B2 187 aa15.69■□□□□ 0.1
TRAPPC3-205ENST00000462715 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
TRAPPC3-205ENST00000462715 MYO5BQ9ULV0 1848 aa15.68■□□□□ 0.1
TRAPPC3-205ENST00000462715 HDGFP51858 240 aaKnown RBP15.68■□□□□ 0.1
TRAPPC3-205ENST00000462715 SALL2Q9Y467 1007 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC3-205ENST00000462715 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
TRAPPC3-205ENST00000462715 NEURL4Q96JN8 1562 aa15.68■□□□□ 0.1
TRAPPC3-205ENST00000462715 POLR1AO95602 1720 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC3-205ENST00000462715 NOP58Q9Y2X3 529 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-205ENST00000462715 RIMS2Q9UQ26 1411 aa15.66■□□□□ 0.1
TRAPPC3-205ENST00000462715 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRAPPC3-205ENST00000462715 SCAF11Q99590 1463 aaKnown RBP15.66■□□□□ 0.1
TRAPPC3-205ENST00000462715 TXNDC2Q86VQ3 553 aa15.65■□□□□ 0.1
TRAPPC3-205ENST00000462715 SPATA31E1Q6ZUB1 1445 aa15.65■□□□□ 0.1
TRAPPC3-205ENST00000462715 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
TRAPPC3-205ENST00000462715 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
TRAPPC3-205ENST00000462715 NCKAP5LQ9HCH0 1330 aa15.64■□□□□ 0.09
TRAPPC3-205ENST00000462715 STRCQ7RTU9 1775 aa15.64■□□□□ 0.09
TRAPPC3-205ENST00000462715 PPP1R15AO75807 674 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC3-205ENST00000462715 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
TRAPPC3-205ENST00000462715 LTKP29376 864 aa15.62■□□□□ 0.09
TRAPPC3-205ENST00000462715 RGL3Q3MIN7 710 aa15.62■□□□□ 0.09
TRAPPC3-205ENST00000462715 MED14O60244 1454 aa15.62■□□□□ 0.09
TRAPPC3-205ENST00000462715 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
TRAPPC3-205ENST00000462715 NPHP4O75161 1426 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC3-205ENST00000462715 PPP4R2Q9NY27 417 aa15.6■□□□□ 0.09
TRAPPC3-205ENST00000462715 IQGAP1P46940 1657 aa15.59■□□□□ 0.09
TRAPPC3-205ENST00000462715 C11orf95C9JLR9 678 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC3-205ENST00000462715 VGFO15240 615 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC3-205ENST00000462715 TIMELESSQ9UNS1 1208 aa15.59■□□□□ 0.09
TRAPPC3-205ENST00000462715 PLEKHG1Q9ULL1 1385 aa15.59■□□□□ 0.09
TRAPPC3-205ENST00000462715 PPLO60437 1756 aa15.59■□□□□ 0.09
TRAPPC3-205ENST00000462715 RTL5Q5HYW3 569 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC3-205ENST00000462715 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC3-205ENST00000462715 SIN3AQ96ST3 1273 aa15.58■□□□□ 0.08
TRAPPC3-205ENST00000462715 IFT172Q9UG01 1749 aa15.57■□□□□ 0.08
TRAPPC3-205ENST00000462715 STAC3Q96MF2 364 aa15.56■□□□□ 0.08
TRAPPC3-205ENST00000462715 MYOM2P54296 1465 aa15.54■□□□□ 0.08
TRAPPC3-205ENST00000462715 USP35Q9P2H5 1018 aa15.54■□□□□ 0.08
TRAPPC3-205ENST00000462715 SETBP1Q9Y6X0 1596 aa15.54■□□□□ 0.08
TRAPPC3-205ENST00000462715 ANP32CO43423 234 aa15.53■□□□□ 0.08
TRAPPC3-205ENST00000462715 DCAF11Q8TEB1 546 aa15.53■□□□□ 0.08
TRAPPC3-205ENST00000462715 WASHC2AQ641Q2 1341 aa15.53■□□□□ 0.08
TRAPPC3-205ENST00000462715 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
TRAPPC3-205ENST00000462715 TONSLQ96HA7 1378 aa15.52■□□□□ 0.07
TRAPPC3-205ENST00000462715 ADGRF5Q8IZF2 1346 aa15.51■□□□□ 0.07
TRAPPC3-205ENST00000462715 SLC26A8Q96RN1 970 aa15.51■□□□□ 0.07
TRAPPC3-205ENST00000462715 SENP3Q9H4L4 574 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC3-205ENST00000462715 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
TRAPPC3-205ENST00000462715 TBX22Q9Y458 520 aa15.5■□□□□ 0.07
TRAPPC3-205ENST00000462715 NRXN1Q9ULB1 1477 aa15.5■□□□□ 0.07
TRAPPC3-205ENST00000462715 ADAMTS13Q76LX8 1427 aa15.5■□□□□ 0.07
TRAPPC3-205ENST00000462715 NRXN3Q9Y4C0 1643 aa15.49■□□□□ 0.07
TRAPPC3-205ENST00000462715 L3MBTL2Q969R5 705 aa15.49■□□□□ 0.07
TRAPPC3-205ENST00000462715 PIK3C2GO75747 1445 aa15.49■□□□□ 0.07
TRAPPC3-205ENST00000462715 PIK3R4Q99570 1358 aa15.46■□□□□ 0.07
TRAPPC3-205ENST00000462715 IPO9Q96P70 1041 aaKnown RBP15.46■□□□□ 0.07
TRAPPC3-205ENST00000462715 LAMC1P11047 1609 aa15.46■□□□□ 0.07
TRAPPC3-205ENST00000462715 ALKQ9UM73 1620 aa15.46■□□□□ 0.07
TRAPPC3-205ENST00000462715 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
TRAPPC3-205ENST00000462715 DDX10Q13206 875 aaKnown RBP15.44■□□□□ 0.06
TRAPPC3-205ENST00000462715 ZNF335Q9H4Z2 1342 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC3-205ENST00000462715 PRAG1Q86YV5 1406 aa15.43■□□□□ 0.06
TRAPPC3-205ENST00000462715 SETD1AO15047 1707 aaKnown RBP15.43■□□□□ 0.06
TRAPPC3-205ENST00000462715 ANP32AP39687 249 aaKnown RBP15.43■□□□□ 0.06
TRAPPC3-205ENST00000462715 C14orf93Q9H972 538 aaKnown RBP15.43■□□□□ 0.06
TRAPPC3-205ENST00000462715 NBR1Q14596 966 aa15.43■□□□□ 0.06
TRAPPC3-205ENST00000462715 KCNA6P17658 529 aa15.42■□□□□ 0.06
TRAPPC3-205ENST00000462715 METP08581 1390 aa15.42■□□□□ 0.06
TRAPPC3-205ENST00000462715 NWD1Q149M9 1564 aa15.42■□□□□ 0.06
TRAPPC3-205ENST00000462715 CPS1P31327 1500 aa15.42■□□□□ 0.06
TRAPPC3-205ENST00000462715 IL27Q8NEV9 243 aa15.42■□□□□ 0.06
TRAPPC3-205ENST00000462715 CHD2O14647 1828 aaKnown RBP15.41■□□□□ 0.06
TRAPPC3-205ENST00000462715 EIF5BO60841 1220 aaKnown RBP15.41■□□□□ 0.06
TRAPPC3-205ENST00000462715 CFAP70Q5T0N1 1121 aa15.41■□□□□ 0.06
TRAPPC3-205ENST00000462715 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
TRAPPC3-205ENST00000462715 KIAA1210Q9ULL0 1709 aa15.4■□□□□ 0.06
TRAPPC3-205ENST00000462715 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC3-205ENST00000462715 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC3-205ENST00000462715 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
TRAPPC3-205ENST00000462715 AMOTL2Q9Y2J4 779 aa15.38■□□□□ 0.05
TRAPPC3-205ENST00000462715 PTPRUQ92729 1446 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms