RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CDC42BPAQ5VT25 1732 aa4.6□□□□□ -1.67
COL8A1-204ENST00000462604 PLIN1O60240 522 aa4.59□□□□□ -1.67
COL8A1-204ENST00000462604 GOLGA2Q08379 1002 aa4.59□□□□□ -1.67
COL8A1-204ENST00000462604 TRPM1Q7Z4N2 1603 aa4.59□□□□□ -1.67
COL8A1-204ENST00000462604 SAMD9LQ8IVG5 1584 aa4.59□□□□□ -1.67
COL8A1-204ENST00000462604 STAC3Q96MF2 364 aa4.59□□□□□ -1.67
COL8A1-204ENST00000462604 SYCP2Q9BX26 1530 aa4.59□□□□□ -1.67
COL8A1-204ENST00000462604 DUOX2Q9NRD8 1548 aa4.59□□□□□ -1.67
COL8A1-204ENST00000462604 PREX2Q70Z35 1606 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 PLXNC1O60486 1568 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 MAGI2Q86UL8 1455 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 PIK3C2GO75747 1445 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 NPC1L1Q9UHC9 1359 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 KDM2BQ8NHM5 1336 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 PPP2R1AP30153 589 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 FAM161AQ3B820 660 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 NGEFQ8N5V2 710 aa4.58□□□□□ -1.68
COL8A1-204ENST00000462604 SCAF11Q99590 1463 aaKnown RBP4.57□□□□□ -1.68
COL8A1-204ENST00000462604 SCAPERQ9BY12 1400 aa4.57□□□□□ -1.68
COL8A1-204ENST00000462604 NINLQ9Y2I6 1382 aa4.57□□□□□ -1.68
COL8A1-204ENST00000462604 E9PSI1 815 aa4.57□□□□□ -1.68
COL8A1-204ENST00000462604 DUSP27Q5VZP5 1158 aa4.57□□□□□ -1.68
COL8A1-204ENST00000462604 ADAMTS8Q9UP79 889 aa4.57□□□□□ -1.68
COL8A1-204ENST00000462604 IQGAP3Q86VI3 1631 aa4.57□□□□□ -1.68
COL8A1-204ENST00000462604 CLASP1Q7Z460 1538 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 ASXL1Q8IXJ9 1541 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 WDR7Q9Y4E6 1490 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 PLEKHH1Q9ULM0 1364 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 ZNF521Q96K83 1311 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 SLFN5Q08AF3 891 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 C20orf194Q5TEA3 1177 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 EFCAB2Q5VUJ9 269 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 RNF17Q9BXT8 1623 aaKnown RBP4.56□□□□□ -1.68
COL8A1-204ENST00000462604 SYNMO15061 1565 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 ABCC2Q92887 1545 aa4.56□□□□□ -1.68
COL8A1-204ENST00000462604 PLCH2O75038 1416 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 KANK1Q14678 1352 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 SPAG9O60271 1321 aaKnown RBP4.55□□□□□ -1.68
COL8A1-204ENST00000462604 CGNL1Q0VF96 1302 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 CANXP27824 592 aaKnown RBP4.55□□□□□ -1.68
COL8A1-204ENST00000462604 GSE1Q14687 1217 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 TTC37Q6PGP7 1564 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 TRPM2O94759 1503 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.55□□□□□ -1.68
COL8A1-204ENST00000462604 NKTRP30414 1462 aaKnown RBP4.55□□□□□ -1.68
COL8A1-204ENST00000462604 RTEL1-TNFRSF6BF6WH68 1400 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 PTPRTO14522 1441 aa4.55□□□□□ -1.68
COL8A1-204ENST00000462604 MAPK8IP3Q9UPT6 1336 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 AAMPQ13685 434 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 BECN1Q14457 450 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 NFKBIBQ15653 356 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 C8orf34Q49A92 452 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 C14orf37Q86TY3 774 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 CNKSR2Q8WXI2 1034 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 MADDQ8WXG6 1647 aa4.54□□□□□ -1.68
COL8A1-204ENST00000462604 CENPJQ9HC77 1338 aaPredicted RBP4.53□□□□□ -1.68
COL8A1-204ENST00000462604 ABCC1P33527 1531 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 ATXN8OSP0DMR3 200 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 RGS3P49796 1198 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 PDE3AQ14432 1141 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 SKAP1Q86WV1 359 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 CCDC146Q8IYE0 955 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 TRMT2AQ8IZ69 625 aaKnown RBP4.53□□□□□ -1.68
COL8A1-204ENST00000462604 IL27Q8NEV9 243 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 UPF2Q9HAU5 1272 aaKnown RBP4.53□□□□□ -1.68
COL8A1-204ENST00000462604 TRAPPC8Q9Y2L5 1435 aa4.53□□□□□ -1.68
COL8A1-204ENST00000462604 ZMYM3Q14202 1370 aa4.53□□□□□ -1.69
COL8A1-204ENST00000462604 UHRF1BP1LA0JNW5 1464 aa4.52□□□□□ -1.69
COL8A1-204ENST00000462604 MYOM2P54296 1465 aa4.52□□□□□ -1.69
COL8A1-204ENST00000462604 APAF1O14727 1248 aa4.52□□□□□ -1.69
COL8A1-204ENST00000462604 NPM1P06748 294 aaKnown RBP eCLIP4.52□□□□□ -1.69
COL8A1-204ENST00000462604 SLC4A3P48751 1232 aa4.52□□□□□ -1.69
COL8A1-204ENST00000462604 PMFBP1Q8TBY8 1022 aa4.52□□□□□ -1.69
COL8A1-204ENST00000462604 CLUAP1Q96AJ1 413 aa4.52□□□□□ -1.69
COL8A1-204ENST00000462604 DNAJC5Q9H3Z4 198 aa4.52□□□□□ -1.69
COL8A1-204ENST00000462604 POLR3AO14802 1390 aaPredicted RBP4.52□□□□□ -1.69
COL8A1-204ENST00000462604 ARAP3Q8WWN8 1544 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 BCAR3O75815 825 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 MORC1Q86VD1 984 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 BBXQ8WY36 941 aaPredicted RBP4.51□□□□□ -1.69
COL8A1-204ENST00000462604 FRAT1Q92837 279 aaPredicted RBP4.51□□□□□ -1.69
COL8A1-204ENST00000462604 CFAP53Q96M91 514 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 FBXO3Q9UK99 471 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 NEURL4Q96JN8 1562 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 SBNO2Q9Y2G9 1366 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 ZFYVE16Q7Z3T8 1539 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 IQGAP1P46940 1657 aa4.51□□□□□ -1.69
COL8A1-204ENST00000462604 CDC42BPBQ9Y5S2 1711 aa4.5□□□□□ -1.69
COL8A1-204ENST00000462604 NSD3Q9BZ95 1437 aa4.5□□□□□ -1.69
COL8A1-204ENST00000462604 L1TD1Q5T7N2 865 aaKnown RBP4.5□□□□□ -1.69
COL8A1-204ENST00000462604 RUNDC1Q96C34 613 aa4.5□□□□□ -1.69
COL8A1-204ENST00000462604 MYH16Q9H6N6 1097 aa4.5□□□□□ -1.69
COL8A1-204ENST00000462604 BRPF3Q9ULD4 1205 aa4.5□□□□□ -1.69
COL8A1-204ENST00000462604 ERVK-7P63135 1459 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 FRAT2O75474 233 aaPredicted RBP4.49□□□□□ -1.69
COL8A1-204ENST00000462604 IGHDP01880 384 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 CFAP70Q5T0N1 1121 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 WDR63Q8IWG1 891 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 WWC1Q8IX03 1113 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 RWDD1Q9H446 243 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms