RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 MPHOSPH9Q99550 1183 aa12.04□□□□□ -0.48
SSR1-203ENST00000462112 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
SSR1-203ENST00000462112 RAB3GAP2Q9H2M9 1393 aa12.04□□□□□ -0.48
SSR1-203ENST00000462112 BCANQ96GW7 911 aa12.03□□□□□ -0.48
SSR1-203ENST00000462112 PIK3C2BO00750 1634 aa12.01□□□□□ -0.49
SSR1-203ENST00000462112 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
SSR1-203ENST00000462112 UBR1Q8IWV7 1749 aa12.01□□□□□ -0.49
SSR1-203ENST00000462112 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
SSR1-203ENST00000462112 TMEM2Q9UHN6 1383 aa12.01□□□□□ -0.49
SSR1-203ENST00000462112 ADGRB3O60242 1522 aa12.01□□□□□ -0.49
SSR1-203ENST00000462112 SYNMO15061 1565 aa12.01□□□□□ -0.49
SSR1-203ENST00000462112 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
SSR1-203ENST00000462112 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
SSR1-203ENST00000462112 CCDC144AA2RUR9 1427 aa11.99□□□□□ -0.49
SSR1-203ENST00000462112 NPHP4O75161 1426 aaPredicted RBP11.99□□□□□ -0.49
SSR1-203ENST00000462112 SLIT1O75093 1534 aa11.99□□□□□ -0.49
SSR1-203ENST00000462112 STRCQ7RTU9 1775 aa11.99□□□□□ -0.49
SSR1-203ENST00000462112 TRPM2O94759 1503 aa11.98□□□□□ -0.49
SSR1-203ENST00000462112 MED14O60244 1454 aa11.97□□□□□ -0.49
SSR1-203ENST00000462112 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
SSR1-203ENST00000462112 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.49
SSR1-203ENST00000462112 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.49
SSR1-203ENST00000462112 KIF1BO60333 1816 aa11.96□□□□□ -0.49
SSR1-203ENST00000462112 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
SSR1-203ENST00000462112 RIMS2Q9UQ26 1411 aa11.95□□□□□ -0.5
SSR1-203ENST00000462112 IQGAP1P46940 1657 aa11.94□□□□□ -0.5
SSR1-203ENST00000462112 TMEM131LA2VDJ0 1609 aa11.94□□□□□ -0.5
SSR1-203ENST00000462112 LTKP29376 864 aa11.93□□□□□ -0.5
SSR1-203ENST00000462112 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
SSR1-203ENST00000462112 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
SSR1-203ENST00000462112 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
SSR1-203ENST00000462112 CLTCL1P53675 1640 aa11.9□□□□□ -0.5
SSR1-203ENST00000462112 NEURL4Q96JN8 1562 aa11.9□□□□□ -0.5
SSR1-203ENST00000462112 TBX22Q9Y458 520 aa11.9□□□□□ -0.5
SSR1-203ENST00000462112 CPS1P31327 1500 aa11.9□□□□□ -0.5
SSR1-203ENST00000462112 ZNF335Q9H4Z2 1342 aaPredicted RBP11.89□□□□□ -0.51
SSR1-203ENST00000462112 ZFYVE9O95405 1425 aa11.89□□□□□ -0.51
SSR1-203ENST00000462112 MYO5BQ9ULV0 1848 aa11.89□□□□□ -0.51
SSR1-203ENST00000462112 RGL3Q3MIN7 710 aa11.89□□□□□ -0.51
SSR1-203ENST00000462112 ANKRD30BQ9BXX2 1392 aa11.89□□□□□ -0.51
SSR1-203ENST00000462112 SLC26A8Q96RN1 970 aa11.88□□□□□ -0.51
SSR1-203ENST00000462112 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
SSR1-203ENST00000462112 KCNA6P17658 529 aa11.87□□□□□ -0.51
SSR1-203ENST00000462112 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
SSR1-203ENST00000462112 PIK3R4Q99570 1358 aa11.87□□□□□ -0.51
SSR1-203ENST00000462112 DIP2AQ14689 1571 aa11.87□□□□□ -0.51
SSR1-203ENST00000462112 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
SSR1-203ENST00000462112 TOM1O60784 492 aa11.85□□□□□ -0.51
SSR1-203ENST00000462112 ATXN8OSP0DMR3 200 aa11.85□□□□□ -0.51
SSR1-203ENST00000462112 PROSER2Q86WR7 435 aaPredicted RBP11.85□□□□□ -0.51
SSR1-203ENST00000462112 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
SSR1-203ENST00000462112 LTBP4Q8N2S1 1624 aa11.82□□□□□ -0.52
SSR1-203ENST00000462112 NEXMIFQ5QGS0 1516 aa11.82□□□□□ -0.52
SSR1-203ENST00000462112 PCGF6Q9BYE7 350 aa11.82□□□□□ -0.52
SSR1-203ENST00000462112 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
SSR1-203ENST00000462112 SETBP1Q9Y6X0 1596 aa11.81□□□□□ -0.52
SSR1-203ENST00000462112 UBAP1LF5GYI3 381 aa11.81□□□□□ -0.52
SSR1-203ENST00000462112 NKTRP30414 1462 aaKnown RBP11.81□□□□□ -0.52
SSR1-203ENST00000462112 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
SSR1-203ENST00000462112 AMOTL2Q9Y2J4 779 aa11.8□□□□□ -0.52
SSR1-203ENST00000462112 PPLO60437 1756 aa11.79□□□□□ -0.52
SSR1-203ENST00000462112 ADAMTS13Q76LX8 1427 aa11.78□□□□□ -0.52
SSR1-203ENST00000462112 NCOA3Q9Y6Q9 1424 aa11.78□□□□□ -0.52
SSR1-203ENST00000462112 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
SSR1-203ENST00000462112 MSH6P52701 1360 aa11.78□□□□□ -0.52
SSR1-203ENST00000462112 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.52
SSR1-203ENST00000462112 MYOM2P54296 1465 aa11.76□□□□□ -0.53
SSR1-203ENST00000462112 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
SSR1-203ENST00000462112 ATF3P18847 181 aa11.76□□□□□ -0.53
SSR1-203ENST00000462112 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
SSR1-203ENST00000462112 ADGRF5Q8IZF2 1346 aa11.76□□□□□ -0.53
SSR1-203ENST00000462112 TMEM94Q12767 1356 aa11.76□□□□□ -0.53
SSR1-203ENST00000462112 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
SSR1-203ENST00000462112 NWD1Q149M9 1564 aa11.75□□□□□ -0.53
SSR1-203ENST00000462112 LAMC1P11047 1609 aa11.75□□□□□ -0.53
SSR1-203ENST00000462112 ALKQ9UM73 1620 aa11.75□□□□□ -0.53
SSR1-203ENST00000462112 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
SSR1-203ENST00000462112 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
SSR1-203ENST00000462112 C14orf93Q9H972 538 aaKnown RBP11.74□□□□□ -0.53
SSR1-203ENST00000462112 CLSPNQ9HAW4 1339 aa11.74□□□□□ -0.53
SSR1-203ENST00000462112 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
SSR1-203ENST00000462112 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
SSR1-203ENST00000462112 PIK3C2GO75747 1445 aa11.73□□□□□ -0.53
SSR1-203ENST00000462112 METP08581 1390 aa11.73□□□□□ -0.53
SSR1-203ENST00000462112 ILDR1Q86SU0 546 aaPredicted RBP11.73□□□□□ -0.53
SSR1-203ENST00000462112 PIP4K2BP78356 416 aa11.72□□□□□ -0.53
SSR1-203ENST00000462112 STK26Q9P289 416 aa11.72□□□□□ -0.53
SSR1-203ENST00000462112 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
SSR1-203ENST00000462112 NRXN3Q9Y4C0 1643 aa11.71□□□□□ -0.53
SSR1-203ENST00000462112 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
SSR1-203ENST00000462112 STRCP1A6NGW2 1772 aa11.71□□□□□ -0.54
SSR1-203ENST00000462112 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
SSR1-203ENST00000462112 PTCH1Q13635 1447 aa11.7□□□□□ -0.54
SSR1-203ENST00000462112 LRPPRCP42704 1394 aaKnown RBP11.7□□□□□ -0.54
SSR1-203ENST00000462112 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
SSR1-203ENST00000462112 CCER1Q8TC90 406 aaPredicted RBP11.7□□□□□ -0.54
SSR1-203ENST00000462112 SIN3AQ96ST3 1273 aa11.7□□□□□ -0.54
SSR1-203ENST00000462112 POGKQ9P215 609 aa11.7□□□□□ -0.54
SSR1-203ENST00000462112 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
SSR1-203ENST00000462112 TMEM132EQ6IEE7 984 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms