RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 FOSBP53539 338 aa15.9■□□□□ 0.14
SCNM1-204ENST00000461862 MAP3K9P80192 1104 aa15.9■□□□□ 0.14
SCNM1-204ENST00000461862 CASKIN1Q8WXD9 1431 aa15.89■□□□□ 0.13
SCNM1-204ENST00000461862 TIAM1Q13009 1591 aa15.88■□□□□ 0.13
SCNM1-204ENST00000461862 PTPRGP23470 1445 aa15.87■□□□□ 0.13
SCNM1-204ENST00000461862 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
SCNM1-204ENST00000461862 ADGRD1Q6QNK2 874 aa15.86■□□□□ 0.13
SCNM1-204ENST00000461862 KCNK17Q96T54 332 aa15.86■□□□□ 0.13
SCNM1-204ENST00000461862 CARMIL2Q6F5E8 1435 aa15.85■□□□□ 0.13
SCNM1-204ENST00000461862 BCL2L12Q9HB09 334 aa15.83■□□□□ 0.12
SCNM1-204ENST00000461862 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
SCNM1-204ENST00000461862 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
SCNM1-204ENST00000461862 DPYSL4O14531 572 aa15.81■□□□□ 0.12
SCNM1-204ENST00000461862 HECW1Q76N89 1606 aa15.81■□□□□ 0.12
SCNM1-204ENST00000461862 ARID3CA6NKF2 412 aa15.8■□□□□ 0.12
SCNM1-204ENST00000461862 TK2O00142 265 aa15.8■□□□□ 0.12
SCNM1-204ENST00000461862 ADAM33Q9BZ11 813 aa15.79■□□□□ 0.12
SCNM1-204ENST00000461862 HRO43593 1189 aa15.78■□□□□ 0.12
SCNM1-204ENST00000461862 ZDHHC16Q969W1 377 aa15.78■□□□□ 0.12
SCNM1-204ENST00000461862 CCDC18Q5T9S5 1454 aa15.78■□□□□ 0.12
SCNM1-204ENST00000461862 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.12
SCNM1-204ENST00000461862 PCDHGA10Q9Y5H3 936 aa15.77■□□□□ 0.12
SCNM1-204ENST00000461862 LRRC9Q6ZRR7 1453 aa15.77■□□□□ 0.11
SCNM1-204ENST00000461862 UACAQ9BZF9 1416 aa15.77■□□□□ 0.11
SCNM1-204ENST00000461862 ABCA8O94911 1581 aa15.75■□□□□ 0.11
SCNM1-204ENST00000461862 ABCC2Q92887 1545 aa15.73■□□□□ 0.11
SCNM1-204ENST00000461862 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
SCNM1-204ENST00000461862 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
SCNM1-204ENST00000461862 PTPREP23469 700 aa15.72■□□□□ 0.11
SCNM1-204ENST00000461862 VPS9D1Q9Y2B5 631 aa15.72■□□□□ 0.11
SCNM1-204ENST00000461862 KANK4Q5T7N3 995 aaPredicted RBP15.71■□□□□ 0.11
SCNM1-204ENST00000461862 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.1
SCNM1-204ENST00000461862 EHBP1L1Q8N3D4 1523 aa15.7■□□□□ 0.1
SCNM1-204ENST00000461862 PHF14O94880 888 aa15.69■□□□□ 0.1
SCNM1-204ENST00000461862 ZBED2Q9BTP6 218 aa15.68■□□□□ 0.1
SCNM1-204ENST00000461862 ZCCHC11Q5TAX3 1644 aaKnown RBP15.68■□□□□ 0.1
SCNM1-204ENST00000461862 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
SCNM1-204ENST00000461862 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
SCNM1-204ENST00000461862 E2F4Q16254 413 aa15.67■□□□□ 0.1
SCNM1-204ENST00000461862 SLC4A5Q9BY07 1137 aa15.67■□□□□ 0.1
SCNM1-204ENST00000461862 KDM5BQ9UGL1 1544 aa15.67■□□□□ 0.1
SCNM1-204ENST00000461862 SUPT6HQ7KZ85 1726 aaKnown RBP15.66■□□□□ 0.1
SCNM1-204ENST00000461862 PDIA6Q15084 440 aa15.66■□□□□ 0.1
SCNM1-204ENST00000461862 TYW1BQ6NUM6 668 aa15.66■□□□□ 0.1
SCNM1-204ENST00000461862 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
SCNM1-204ENST00000461862 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
SCNM1-204ENST00000461862 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
SCNM1-204ENST00000461862 ATP10BO94823 1461 aa15.65■□□□□ 0.1
SCNM1-204ENST00000461862 MAPKBP1O60336 1514 aa15.64■□□□□ 0.09
SCNM1-204ENST00000461862 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SCNM1-204ENST00000461862 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
SCNM1-204ENST00000461862 FBXW7Q969H0 707 aa15.63■□□□□ 0.09
SCNM1-204ENST00000461862 COL9A1P20849 921 aa15.62■□□□□ 0.09
SCNM1-204ENST00000461862 DDX12PQ92771 950 aa15.62■□□□□ 0.09
SCNM1-204ENST00000461862 WDR70Q9NW82 654 aa15.62■□□□□ 0.09
SCNM1-204ENST00000461862 DIP2BQ9P265 1576 aa15.62■□□□□ 0.09
SCNM1-204ENST00000461862 KIF13AQ9H1H9 1805 aa15.61■□□□□ 0.09
SCNM1-204ENST00000461862 ARIH1Q9Y4X5 557 aaPredicted RBP15.61■□□□□ 0.09
SCNM1-204ENST00000461862 CDK13Q14004 1512 aaKnown RBP15.61■□□□□ 0.09
SCNM1-204ENST00000461862 PPP1R3GB7ZBB8 358 aa15.6■□□□□ 0.09
SCNM1-204ENST00000461862 BHMG1C9JSJ3 638 aaPredicted RBP15.6■□□□□ 0.09
SCNM1-204ENST00000461862 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
SCNM1-204ENST00000461862 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
SCNM1-204ENST00000461862 FAM69CQ0P6D2 419 aa15.59■□□□□ 0.09
SCNM1-204ENST00000461862 EPAS1Q99814 870 aa15.59■□□□□ 0.09
SCNM1-204ENST00000461862 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.09
SCNM1-204ENST00000461862 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
SCNM1-204ENST00000461862 NCOA2Q15596 1464 aa15.57■□□□□ 0.08
SCNM1-204ENST00000461862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCNM1-204ENST00000461862 SPDYE16A6NNV3 312 aaPredicted RBP15.55■□□□□ 0.08
SCNM1-204ENST00000461862 PROX2Q3B8N5 592 aa15.55■□□□□ 0.08
SCNM1-204ENST00000461862 WDR7Q9Y4E6 1490 aa15.54■□□□□ 0.08
SCNM1-204ENST00000461862 C6orf132Q5T0Z8 1188 aa15.54■□□□□ 0.08
SCNM1-204ENST00000461862 KCTD12Q96CX2 325 aaKnown RBP15.54■□□□□ 0.08
SCNM1-204ENST00000461862 RBM33Q96EV2 1170 aaKnown RBP15.53■□□□□ 0.08
SCNM1-204ENST00000461862 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
SCNM1-204ENST00000461862 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.08
SCNM1-204ENST00000461862 HRCP23327 699 aa15.52■□□□□ 0.08
SCNM1-204ENST00000461862 NBR1Q14596 966 aa15.52■□□□□ 0.08
SCNM1-204ENST00000461862 STAC3Q96MF2 364 aa15.52■□□□□ 0.08
SCNM1-204ENST00000461862 FGD6Q6ZV73 1430 aa15.51■□□□□ 0.07
SCNM1-204ENST00000461862 HCSTQ9UBK5 93 aa15.51■□□□□ 0.07
SCNM1-204ENST00000461862 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
SCNM1-204ENST00000461862 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
SCNM1-204ENST00000461862 TSPOAP1O95153 1857 aa15.49■□□□□ 0.07
SCNM1-204ENST00000461862 PPRC1Q5VV67 1664 aaKnown RBP15.49■□□□□ 0.07
SCNM1-204ENST00000461862 PRIM1P49642 420 aaKnown RBP15.49■□□□□ 0.07
SCNM1-204ENST00000461862 ITSN2Q9NZM3 1697 aa15.48■□□□□ 0.07
SCNM1-204ENST00000461862 GLI2P10070 1586 aa15.47■□□□□ 0.07
SCNM1-204ENST00000461862 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
SCNM1-204ENST00000461862 KIF14Q15058 1648 aa15.46■□□□□ 0.07
SCNM1-204ENST00000461862 PTPN23Q9H3S7 1636 aa15.46■□□□□ 0.07
SCNM1-204ENST00000461862 MIA2Q96PC5 1412 aa15.46■□□□□ 0.07
SCNM1-204ENST00000461862 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
SCNM1-204ENST00000461862 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.06
SCNM1-204ENST00000461862 NBPF3Q9H094 633 aa15.45■□□□□ 0.06
SCNM1-204ENST00000461862 RABGEF1Q9UJ41 708 aa15.45■□□□□ 0.06
SCNM1-204ENST00000461862 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
SCNM1-204ENST00000461862 MAP3K7O43318 606 aa15.43■□□□□ 0.06
SCNM1-204ENST00000461862 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms