RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ANKLE1Q8NAG6 615 aa11□□□□□ -0.65
CCT4-203ENST00000461540 GDF9O60383 454 aa10.98□□□□□ -0.65
CCT4-203ENST00000461540 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
CCT4-203ENST00000461540 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
CCT4-203ENST00000461540 INSM1Q01101 510 aaPredicted RBP10.96□□□□□ -0.65
CCT4-203ENST00000461540 LIAT1Q6ZQX7 453 aa10.96□□□□□ -0.65
CCT4-203ENST00000461540 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
CCT4-203ENST00000461540 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
CCT4-203ENST00000461540 GRXCR2A6NFK2 248 aa10.92□□□□□ -0.66
CCT4-203ENST00000461540 TLL1O43897 1013 aa10.92□□□□□ -0.66
CCT4-203ENST00000461540 S1PR4O95977 384 aa10.91□□□□□ -0.66
CCT4-203ENST00000461540 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
CCT4-203ENST00000461540 C11orf95C9JLR9 678 aaPredicted RBP10.9□□□□□ -0.66
CCT4-203ENST00000461540 WIPF1O43516 503 aa10.9□□□□□ -0.66
CCT4-203ENST00000461540 CDHR5Q9HBB8 845 aa10.9□□□□□ -0.66
CCT4-203ENST00000461540 CRIPAKQ8N1N5 446 aa10.88□□□□□ -0.67
CCT4-203ENST00000461540 NFX1Q12986 1120 aaKnown RBP10.87□□□□□ -0.67
CCT4-203ENST00000461540 GMPR2Q9P2T1 348 aaKnown RBP10.86□□□□□ -0.67
CCT4-203ENST00000461540 DACH1Q9UI36 760 aa10.86□□□□□ -0.67
CCT4-203ENST00000461540 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
CCT4-203ENST00000461540 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
CCT4-203ENST00000461540 FOXC1Q12948 553 aa10.84□□□□□ -0.67
CCT4-203ENST00000461540 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
CCT4-203ENST00000461540 AXIN1O15169 862 aa10.83□□□□□ -0.68
CCT4-203ENST00000461540 ADH1BP00325 375 aa10.81□□□□□ -0.68
CCT4-203ENST00000461540 OSBPP22059 807 aa10.81□□□□□ -0.68
CCT4-203ENST00000461540 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
CCT4-203ENST00000461540 PKD2L1Q9P0L9 805 aa10.81□□□□□ -0.68
CCT4-203ENST00000461540 LOC100996750A0A140TA64 210 aa10.8□□□□□ -0.68
CCT4-203ENST00000461540 AVPP01185 164 aa10.8□□□□□ -0.68
CCT4-203ENST00000461540 CTC1Q2NKJ3 1217 aa10.8□□□□□ -0.68
CCT4-203ENST00000461540 EYA1Q99502 592 aa10.8□□□□□ -0.68
CCT4-203ENST00000461540 KRTAP4-6Q9BYQ5 205 aa10.8□□□□□ -0.68
CCT4-203ENST00000461540 ACTN4O43707 911 aaKnown RBP10.79□□□□□ -0.68
CCT4-203ENST00000461540 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
CCT4-203ENST00000461540 SLC6A16Q9GZN6 736 aa10.79□□□□□ -0.68
CCT4-203ENST00000461540 CYP4X1Q8N118 509 aa10.76□□□□□ -0.69
CCT4-203ENST00000461540 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
CCT4-203ENST00000461540 NR1I2O75469 434 aa10.75□□□□□ -0.69
CCT4-203ENST00000461540 DCAF8L2P0C7V8 631 aa10.75□□□□□ -0.69
CCT4-203ENST00000461540 FAM181BA6NEQ2 426 aa10.74□□□□□ -0.69
CCT4-203ENST00000461540 TOR4AQ9NXH8 423 aa10.74□□□□□ -0.69
CCT4-203ENST00000461540 DNAJB2P25686 324 aa10.73□□□□□ -0.69
CCT4-203ENST00000461540 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
CCT4-203ENST00000461540 TERTO14746 1132 aaKnown RBP10.72□□□□□ -0.69
CCT4-203ENST00000461540 CFHP08603 1231 aa10.72□□□□□ -0.69
CCT4-203ENST00000461540 E2F4Q16254 413 aa10.71□□□□□ -0.69
CCT4-203ENST00000461540 ARIH1Q9Y4X5 557 aaPredicted RBP10.71□□□□□ -0.69
CCT4-203ENST00000461540 RPIAP49247 311 aa10.7□□□□□ -0.7
CCT4-203ENST00000461540 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
CCT4-203ENST00000461540 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
CCT4-203ENST00000461540 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
CCT4-203ENST00000461540 TTC24A2A3L6 582 aaPredicted RBP10.66□□□□□ -0.7
CCT4-203ENST00000461540 SCUBE3Q8IX30 993 aa10.66□□□□□ -0.7
CCT4-203ENST00000461540 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
CCT4-203ENST00000461540 SPSB2Q99619 263 aa10.66□□□□□ -0.7
CCT4-203ENST00000461540 SNRPBP14678 240 aaKnown RBP10.65□□□□□ -0.7
CCT4-203ENST00000461540 SENP2Q9HC62 589 aa10.65□□□□□ -0.7
CCT4-203ENST00000461540 ATP13A2Q9NQ11 1180 aa10.64□□□□□ -0.71
CCT4-203ENST00000461540 TRIM47Q96LD4 638 aa10.62□□□□□ -0.71
CCT4-203ENST00000461540 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
CCT4-203ENST00000461540 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
CCT4-203ENST00000461540 SLC10A3P09131 477 aa10.59□□□□□ -0.71
CCT4-203ENST00000461540 SLC16A10Q8TF71 515 aa10.59□□□□□ -0.71
CCT4-203ENST00000461540 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
CCT4-203ENST00000461540 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
CCT4-203ENST00000461540 ZSCAN1Q8NBB4 408 aa10.57□□□□□ -0.72
CCT4-203ENST00000461540 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
CCT4-203ENST00000461540 ADGRG1Q9Y653 693 aa10.57□□□□□ -0.72
CCT4-203ENST00000461540 ZBTB24O43167 697 aaPredicted RBP10.55□□□□□ -0.72
CCT4-203ENST00000461540 SMPD1P17405 629 aa10.54□□□□□ -0.72
CCT4-203ENST00000461540 SNIP1Q8TAD8 396 aaKnown RBP10.54□□□□□ -0.72
CCT4-203ENST00000461540 SUZ12Q15022 739 aaKnown RBP10.53□□□□□ -0.72
CCT4-203ENST00000461540 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
CCT4-203ENST00000461540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
CCT4-203ENST00000461540 WNT7AO00755 349 aa10.5□□□□□ -0.73
CCT4-203ENST00000461540 PTGDRQ13258 359 aa10.5□□□□□ -0.73
CCT4-203ENST00000461540 GMPRP36959 345 aa10.49□□□□□ -0.73
CCT4-203ENST00000461540 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
CCT4-203ENST00000461540 NXF1Q9UBU9 619 aaKnown RBP10.49□□□□□ -0.73
CCT4-203ENST00000461540 IRF7Q92985 503 aa10.48□□□□□ -0.73
CCT4-203ENST00000461540 J3QL48 77 aa10.47□□□□□ -0.73
CCT4-203ENST00000461540 LORP23490 312 aaPredicted RBP10.47□□□□□ -0.73
CCT4-203ENST00000461540 FMNL1O95466 1100 aaPredicted RBP10.45□□□□□ -0.74
CCT4-203ENST00000461540 THAP11Q96EK4 314 aa10.45□□□□□ -0.74
CCT4-203ENST00000461540 FAM160A2Q8N612 972 aaPredicted RBP10.44□□□□□ -0.74
CCT4-203ENST00000461540 HPS1Q92902 700 aa10.44□□□□□ -0.74
CCT4-203ENST00000461540 MRGPRX2Q96LB1 330 aa10.44□□□□□ -0.74
CCT4-203ENST00000461540 MORN1Q5T089 497 aa10.43□□□□□ -0.74
CCT4-203ENST00000461540 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
CCT4-203ENST00000461540 TRIM32Q13049 653 aa10.42□□□□□ -0.74
CCT4-203ENST00000461540 PRDM9Q9NQV7 894 aa10.42□□□□□ -0.74
CCT4-203ENST00000461540 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
CCT4-203ENST00000461540 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
CCT4-203ENST00000461540 OATP04181 439 aa10.39□□□□□ -0.75
CCT4-203ENST00000461540 ATP6V1AP38606 617 aa10.39□□□□□ -0.75
CCT4-203ENST00000461540 FUT2Q10981 343 aa10.39□□□□□ -0.75
CCT4-203ENST00000461540 MLLT3P42568 568 aaPredicted RBP10.38□□□□□ -0.75
CCT4-203ENST00000461540 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
CCT4-203ENST00000461540 SALL2Q9Y467 1007 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms