RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
COL21A1-205ENST00000461489 PCDHB3Q9Y5E6 796 aa10.55□□□□□ -0.72
COL21A1-205ENST00000461489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.54□□□□□ -0.72
COL21A1-205ENST00000461489 OATP04181 439 aa10.54□□□□□ -0.72
COL21A1-205ENST00000461489 NKX2-3Q8TAU0 364 aa10.54□□□□□ -0.72
COL21A1-205ENST00000461489 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
COL21A1-205ENST00000461489 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
COL21A1-205ENST00000461489 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
COL21A1-205ENST00000461489 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
COL21A1-205ENST00000461489 ZPR1O75312 459 aa10.51□□□□□ -0.73
COL21A1-205ENST00000461489 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
COL21A1-205ENST00000461489 GNPATO15228 680 aa10.5□□□□□ -0.73
COL21A1-205ENST00000461489 CFHP08603 1231 aa10.5□□□□□ -0.73
COL21A1-205ENST00000461489 GGCXP38435 758 aa10.5□□□□□ -0.73
COL21A1-205ENST00000461489 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
COL21A1-205ENST00000461489 FECHP22830 423 aa10.48□□□□□ -0.73
COL21A1-205ENST00000461489 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
COL21A1-205ENST00000461489 GPR37O15354 613 aa10.47□□□□□ -0.73
COL21A1-205ENST00000461489 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
COL21A1-205ENST00000461489 SLC10A3P09131 477 aa10.47□□□□□ -0.73
COL21A1-205ENST00000461489 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.73
COL21A1-205ENST00000461489 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
COL21A1-205ENST00000461489 Q6ZNB5 142 aa10.44□□□□□ -0.74
COL21A1-205ENST00000461489 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
COL21A1-205ENST00000461489 V9GY48 417 aaPredicted RBP10.44□□□□□ -0.74
COL21A1-205ENST00000461489 TLL1O43897 1013 aa10.43□□□□□ -0.74
COL21A1-205ENST00000461489 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
COL21A1-205ENST00000461489 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
COL21A1-205ENST00000461489 GFRA3O60609 400 aa10.41□□□□□ -0.74
COL21A1-205ENST00000461489 NR1I2O75469 434 aa10.41□□□□□ -0.74
COL21A1-205ENST00000461489 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
COL21A1-205ENST00000461489 RDH13Q8NBN7 331 aa10.4□□□□□ -0.74
COL21A1-205ENST00000461489 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
COL21A1-205ENST00000461489 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
COL21A1-205ENST00000461489 DDX11L8A8MPP1 907 aa10.38□□□□□ -0.75
COL21A1-205ENST00000461489 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
COL21A1-205ENST00000461489 S1PR4O95977 384 aa10.36□□□□□ -0.75
COL21A1-205ENST00000461489 ADH1BP00325 375 aa10.36□□□□□ -0.75
COL21A1-205ENST00000461489 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
COL21A1-205ENST00000461489 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
COL21A1-205ENST00000461489 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
COL21A1-205ENST00000461489 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
COL21A1-205ENST00000461489 PHOX2BQ99453 314 aa10.34□□□□□ -0.75
COL21A1-205ENST00000461489 PPEF1O14829 653 aaPredicted RBP10.33□□□□□ -0.76
COL21A1-205ENST00000461489 SLC19A1P41440 591 aa10.33□□□□□ -0.76
COL21A1-205ENST00000461489 ANKLE1Q8NAG6 615 aa10.33□□□□□ -0.76
COL21A1-205ENST00000461489 PDZRN3Q9UPQ7 1066 aa10.33□□□□□ -0.76
COL21A1-205ENST00000461489 SLC6A16Q9GZN6 736 aa10.32□□□□□ -0.76
COL21A1-205ENST00000461489 FUT2Q10981 343 aa10.3□□□□□ -0.76
COL21A1-205ENST00000461489 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
COL21A1-205ENST00000461489 SPSB2Q99619 263 aa10.3□□□□□ -0.76
COL21A1-205ENST00000461489 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
COL21A1-205ENST00000461489 GCGRP47871 477 aa10.29□□□□□ -0.76
COL21A1-205ENST00000461489 MORN1Q5T089 497 aa10.29□□□□□ -0.76
COL21A1-205ENST00000461489 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
COL21A1-205ENST00000461489 EMID1Q96A84 441 aaPredicted RBP10.28□□□□□ -0.76
COL21A1-205ENST00000461489 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
COL21A1-205ENST00000461489 IRF6O14896 467 aa10.25□□□□□ -0.77
COL21A1-205ENST00000461489 LIAT1Q6ZQX7 453 aa10.25□□□□□ -0.77
COL21A1-205ENST00000461489 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
COL21A1-205ENST00000461489 LCE2BO14633 110 aa10.24□□□□□ -0.77
COL21A1-205ENST00000461489 FMNL1O95466 1100 aaPredicted RBP10.24□□□□□ -0.77
COL21A1-205ENST00000461489 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
COL21A1-205ENST00000461489 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
COL21A1-205ENST00000461489 MDM2Q00987 491 aaPredicted RBP10.23□□□□□ -0.77
COL21A1-205ENST00000461489 GRIPAP1Q4V328 841 aa10.23□□□□□ -0.77
COL21A1-205ENST00000461489 ZNF697Q5TEC3 545 aa10.23□□□□□ -0.77
COL21A1-205ENST00000461489 THAP11Q96EK4 314 aa10.22□□□□□ -0.77
COL21A1-205ENST00000461489 PLA2G2CQ5R387 149 aa10.21□□□□□ -0.77
COL21A1-205ENST00000461489 TRIM67Q6ZTA4 783 aa10.21□□□□□ -0.77
COL21A1-205ENST00000461489 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
COL21A1-205ENST00000461489 CD46P15529 392 aa10.2□□□□□ -0.78
COL21A1-205ENST00000461489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL21A1-205ENST00000461489 FAM160A2Q8N612 972 aaPredicted RBP10.19□□□□□ -0.78
COL21A1-205ENST00000461489 SALL2Q9Y467 1007 aaPredicted RBP10.19□□□□□ -0.78
COL21A1-205ENST00000461489 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
COL21A1-205ENST00000461489 FCF1Q9Y324 198 aaKnown RBP10.18□□□□□ -0.78
COL21A1-205ENST00000461489 KDM4AO75164 1064 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 PRR20EP86478 221 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 PRR20CP86479 221 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 PRR20DP86480 221 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 PRR20BP86481 221 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 PRR20AP86496 221 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 RNF19BQ6ZMZ0 732 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
COL21A1-205ENST00000461489 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
COL21A1-205ENST00000461489 Q3C1V9 767 aa10.16□□□□□ -0.78
COL21A1-205ENST00000461489 PKDCCQ504Y2 493 aa10.16□□□□□ -0.78
COL21A1-205ENST00000461489 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
COL21A1-205ENST00000461489 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.78
COL21A1-205ENST00000461489 GDF9O60383 454 aa10.14□□□□□ -0.79
COL21A1-205ENST00000461489 CLCN1P35523 988 aa10.14□□□□□ -0.79
COL21A1-205ENST00000461489 RPIAP49247 311 aa10.14□□□□□ -0.79
COL21A1-205ENST00000461489 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
COL21A1-205ENST00000461489 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
COL21A1-205ENST00000461489 USP46P62068 366 aa10.13□□□□□ -0.79
COL21A1-205ENST00000461489 FOXC1Q12948 553 aa10.13□□□□□ -0.79
COL21A1-205ENST00000461489 FAM187AA6NFU0 413 aa10.12□□□□□ -0.79
COL21A1-205ENST00000461489 DGAT1O75907 488 aa10.12□□□□□ -0.79
COL21A1-205ENST00000461489 CD2BP2O95400 341 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms